Detailed information of XP_032234471.2 in Nematostella vectensis

Genomic Location: NC_064045.1:4477241...4492455
NR annotation: XP_032234471.2, trinucleotide repeat-containing gene 6A protein isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3UHK8Trinucleotide repeat-containing gene 6A protein OS=Mus musculus OX=10090 GN=Tnrc6a PE=1 SV=2
Q8NDV7Trinucleotide repeat-containing gene 6A protein OS=Homo sapiens OX=9606 GN=TNRC6A PE=1 SV=2
Q3AQP5Chaperone protein DnaJ OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=dnaJ PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00226DnaJDnaJ domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001623DomainDnaJ domainInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR052068FamilyGW182 domain-containing proteinInterproscan
IPR041917DomainTrinucleotide repeat-containing gene 6C protein, UBA domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13020TRINUCLEOTIDE REPEAT-CONTAINING GENE 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0035195Biological ProcessmiRNA-mediated post-transcriptional gene silencingInterproscan
GO:0060213Biological Processpositive regulation of nuclear-transcribed mRNA poly(A) tail shorteningInterproscan

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