Gene detail

Detailed information of XP_032234831.2 in Nematostella vectensis

Genomic Location: NC_064047.1:9135446...9149821
NR annotation: XP_032234831.2, trifunctional purine biosynthetic protein adenosine-3 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5509911

ATGGGCGATAAAGTACTGCTGATTGGTAGTGGAGGACGGGAACACGCTATAGCTTGGAAACTATCCCAATCCGACCATGTTTCCACGATTTATATCGCGCCGGGGAACGCTGGAACCAAAGGACACAAGATGCAAAATGTTTCATCTTCGGTACTAGACGTCAACGTTAACGAAAATGTCGTCTCCTATTGCCGTGATAACAAGGTTGATTTCGTCGTTGTTGGACCCGAAGCACCTCTGGCTAATGGCATAGCGGACTCTCTTCAAGATGCCGGAATTCCCTGTTTTGGTCCTAGCCAAAAGGCTGCTCAAATTGAAGCAAGCAAGGACTTCGCCAAACATTTCATGTCTCGACATGACATCCCCACGGCAAAATTTGCTTCTTTCACTGATGCCGACAAGGCATGTGAGCATATCAGGAAAGCAGACTACGCTGCTTTGGTTGTGAAGGCTAGCGGGTTGGCCGCGGGAAAGGGGGTTGTTGTGGCCAGTGACAAGGACGAGGCGATAAAAGCTGTCCATGACATGTTGAAGGACAATATCTTTGGTGATGCTGGCAGCACTATTGTTATTGAAGAAAAGTTAGAAGGAGAAGAGTTCTCAGTGTTGGCTTTCACAGATGGCAAAACCATTGCAGCGATGCCTCCAGCCCAAGACCATAAGACCCTGTTGGACGGTGACAAGGGACCAAACACAGGCGGCATGGGTGCCTATGCCCCTTGTCCTCAGATATCTGATGATGTGCTAGAGACCATTAAAAGGGATGTGCTGCAAAGAGCTGTTGACGGCATGAGGGAAGAGGGATGCCCCTACATCGGCGTCCTATATGCCGGTATCATGCTCACCAATGATGGCCCTAAAGTGCTGGAGTTTAACTGTAGGTTTGGAGACCCAGAGACTCAAGTCCTGTTGCCTCTACTGAAGAGTGACCTTTATGCCACCATGATGGAGTGTGTAACTGGTGAGCTAGAGATGTCGATGCCAGTGTTCGCTGCTGGCAAGGTTGCTGTGGGTGTGGTTATGGCTAGCGGCGGTTACCCCGGCTCATACAAGAAGGGTCTTACCATCCATGGCTTAGAGGGTGTTATGAGCCTAGAAGACACCTTGGTGTTCCATGCTGGTACCAAACCAAACGAGTCAAGGGACCAGGTGGTCACGTCTGGAGGGCGAGTCCTTGCTGTTGTTGGCCTGTCCGAGACTGTGGTGTTAGCACAGGAGAAGGCGTATGAGGGAGTCAAGGGAATCTGCTTTGATGATTGTTATTACAGGAAGGACATAGCTACTAAGGCATGCAGATCAGCACCCCTGAGCTACTTTGCATCTGGAGTAAATATAGATGCAGGTAACAGCCTAGTGAAGGCCATCAAACCGTTGGCAGCAGCGACGGCAAGAAGTGGCTGTTCAGCAGACCTGGGTGGGTTTGGGGGGTTCTTTGATTTGGCGGCAGCTGGGTATAAAGATCCCTTGCTAGTCAGTGGAACCGATGGAGTTGGCACTAAACTCAAGGTGGCTCAGTCAGTTTGTTGCCATGGTTCCGTCGGTATAGACCTGGTAGCTATGTGCGTTAATGACATCCTCGCACATGGAGCAGAGCCACTTTACTTCCTGGACTACTTCGCTTGCGGCAAGCTGGATGTGGGTGTGGCTAAGGAGGTGGTAAGGGGTGTGGCAGAAGGGTGTTCTCAGGCTGGATGTGCACTTATTGGAGGGGAGACAGCAGAGATGCCAGGGATGTATCAGAATGGAGAATATGACATCGCTGGCTTTGCCGTCGGGGCTGTGGAGAGAGAGCAAGTCCTCCCCCGCATTCAGGCAATTAAAACAGGCGATGTCCTAATTGGTCTGGCGTCCAGTGGGATTCACAGCAATGGTTTTAGTCTTGTGCGACGTGTGATTGAAGCTGCTGGTCTAGAATTCAGCTGCCCTGCACCCTTTCCCACCACCCAAGGGGTGCAGTCTATGACATCCTTAGGCATGGCTCTGTTGGCGCCGACACGCATCTACTGTAAAGCAGTGTTGCCACTGATGAAAGGGGAAGGTTGCAAGATCAAGGCCTTTGCTCACATAACAGGAGGAGGATTGGTGGAGAACATCCCCCGAATTCTTCCCGATGGGAAAGGTGTTGAACTGGATGCTAATACCTGGAAAATACAACCTGTGTTTGGCTGGATCTGGTCTCAAGGTCAAGTGGCGACGACTGAGATGGTGCGGACATTCAACTGTGGCATTGGTGGTGTTCTGATTGTTGAAGGTAGTGATGCAGCATTTGTTCTGGACAGTTTGCGGGATGCTGGAGAGACTGTCTGGAGTATTGGCCAGGTGATTGATTTTCAGGATGGAATTGAGCGGGTCAAAATCAACAATATACATCATGCTTTAGAAAATGCTTCTGCAGATGTCACCTTGTTCAACACTACGCCATCGTCACTTGCTGATGGTGTGGCAAAGAGAATTAAGCTTAGTAATGGAGATGCTGCTGTAAACATGCCAAGAATGCGTGTTGGCGTGTTGATCTCAGGATCGGGAACAAACCTTCAAGCGTTGATTGACAGAAGTTTACGTTACGACAGCCATGCAGACATTGTTCTTGTCATCAGTAACAAGCCTGGGGTCCAAGGTCTCAAGCGGGCACAGGATGCTGGGATACCAACAATGGTCATCAAGCACAAGGATTTCAAGAACCGTGTTGACTTTGACATGGCTGTACACGCGGCACTGGAGGACGCCCAAGTGGAACTCGTGTGTCTAGCTGGCTTCATGCGGATACTTTCTGGCGACTTTGTGCGCAAGTGGCGAGGCCGACTGCTTAATATTCATCCGTCCCTCTTACCTTCCTTTAAGGGTATAGATGCCCACCAGCAAGTGCTCGCGGCAGGAGTCTGTATTTCAGGATGCACTGTCCATTTTGTTGTGGAGGAAGTGGATGCGGGTGCAATAATCACGCAGGAAGCAGTGCCTGTGTTGCCAGGGGATACGGTCCAGAGCTTACAAGAACGGGTAAAGACCGCTGAGCATCGTGCCTACCCGCGGGCTCTTGAACTGTTGGCCAGCGGAAAGGCTCGGCTTGATGTAAATGGAAAAGTGGAGTTAACAGCATAG

Transcript

rna-XM_032378940.2

ATTAATGAATTACGTCTTGATAAGACTACTCACTCTAtctaaaaataagaacaacaACATGAATATGTTTTAGTTCTCGCAAACTCTACTAGTATTTTTCCTTCCACTACCCTCCCACCTAGGGTAAGACTACGGCTAGCACGTGTATGTACCTTCACGAAGTGTGACTTTCAAACCGACTGCTTTCCCGCACGGAGGACTTTGTGATACTTTCCTCATAAATGGGCGATAAAGTACTGCTGATTGGTAGTGGAGGACGGGAACACGCTATAGCTTGGAAACTATCCCAATCCGACCATGTTTCCACGATTTATATCGCGCCGGGGAACGCTGGAACCAAAGGACACAAGATGCAAAATGTTTCATCTTCGGTACTAGACGTCAACGTTAACGAAAATGTCGTCTCCTATTGCCGTGATAACAAGGTTGATTTCGTCGTTGTTGGACCCGAAGCACCTCTGGCTAATGGCATAGCGGACTCTCTTCAAGATGCCGGAATTCCCTGTTTTGGTCCTAGCCAAAAGGCTGCTCAAATTGAAGCAAGCAAGGACTTCGCCAAACATTTCATGTCTCGACATGACATCCCCACGGCAAAATTTGCTTCTTTCACTGATGCCGACAAGGCATGTGAGCATATCAGGAAAGCAGACTACGCTGCTTTGGTTGTGAAGGCTAGCGGGTTGGCCGCGGGAAAGGGGGTTGTTGTGGCCAGTGACAAGGACGAGGCGATAAAAGCTGTCCATGACATGTTGAAGGACAATATCTTTGGTGATGCTGGCAGCACTATTGTTATTGAAGAAAAGTTAGAAGGAGAAGAGTTCTCAGTGTTGGCTTTCACAGATGGCAAAACCATTGCAGCGATGCCTCCAGCCCAAGACCATAAGACCCTGTTGGACGGTGACAAGGGACCAAACACAGGCGGCATGGGTGCCTATGCCCCTTGTCCTCAGATATCTGATGATGTGCTAGAGACCATTAAAAGGGATGTGCTGCAAAGAGCTGTTGACGGCATGAGGGAAGAGGGATGCCCCTACATCGGCGTCCTATATGCCGGTATCATGCTCACCAATGATGGCCCTAAAGTGCTGGAGTTTAACTGTAGGTTTGGAGACCCAGAGACTCAAGTCCTGTTGCCTCTACTGAAGAGTGACCTTTATGCCACCATGATGGAGTGTGTAACTGGTGAGCTAGAGATGTCGATGCCAGTGTTCGCTGCTGGCAAGGTTGCTGTGGGTGTGGTTATGGCTAGCGGCGGTTACCCCGGCTCATACAAGAAGGGTCTTACCATCCATGGCTTAGAGGGTGTTATGAGCCTAGAAGACACCTTGGTGTTCCATGCTGGTACCAAACCAAACGAGTCAAGGGACCAGGTGGTCACGTCTGGAGGGCGAGTCCTTGCTGTTGTTGGCCTGTCCGAGACTGTGGTGTTAGCACAGGAGAAGGCGTATGAGGGAGTCAAGGGAATCTGCTTTGATGATTGTTATTACAGGAAGGACATAGCTACTAAGGCATGCAGATCAGCACCCCTGAGCTACTTTGCATCTGGAGTAAATATAGATGCAGGTAACAGCCTAGTGAAGGCCATCAAACCGTTGGCAGCAGCGACGGCAAGAAGTGGCTGTTCAGCAGACCTGGGTGGGTTTGGGGGGTTCTTTGATTTGGCGGCAGCTGGGTATAAAGATCCCTTGCTAGTCAGTGGAACCGATGGAGTTGGCACTAAACTCAAGGTGGCTCAGTCAGTTTGTTGCCATGGTTCCGTCGGTATAGACCTGGTAGCTATGTGCGTTAATGACATCCTCGCACATGGAGCAGAGCCACTTTACTTCCTGGACTACTTCGCTTGCGGCAAGCTGGATGTGGGTGTGGCTAAGGAGGTGGTAAGGGGTGTGGCAGAAGGGTGTTCTCAGGCTGGATGTGCACTTATTGGAGGGGAGACAGCAGAGATGCCAGGGATGTATCAGAATGGAGAATATGACATCGCTGGCTTTGCCGTCGGGGCTGTGGAGAGAGAGCAAGTCCTCCCCCGCATTCAGGCAATTAAAACAGGCGATGTCCTAATTGGTCTGGCGTCCAGTGGGATTCACAGCAATGGTTTTAGTCTTGTGCGACGTGTGATTGAAGCTGCTGGTCTAGAATTCAGCTGCCCTGCACCCTTTCCCACCACCCAAGGGGTGCAGTCTATGACATCCTTAGGCATGGCTCTGTTGGCGCCGACACGCATCTACTGTAAAGCAGTGTTGCCACTGATGAAAGGGGAAGGTTGCAAGATCAAGGCCTTTGCTCACATAACAGGAGGAGGATTGGTGGAGAACATCCCCCGAATTCTTCCCGATGGGAAAGGTGTTGAACTGGATGCTAATACCTGGAAAATACAACCTGTGTTTGGCTGGATCTGGTCTCAAGGTCAAGTGGCGACGACTGAGATGGTGCGGACATTCAACTGTGGCATTGGTGGTGTTCTGATTGTTGAAGGTAGTGATGCAGCATTTGTTCTGGACAGTTTGCGGGATGCTGGAGAGACTGTCTGGAGTATTGGCCAGgTGATTGATTTTCAGGATGGAATTGAGCGGGTCAAAATCAACAATATACATCATGCTTTAGAAAATGCTTCTGCAGATGTCACCTTGTTCAACACTACGCCATCGTCACTTGCTGATGGTGTGGCAAAGAGAATTAAGCTTAGTAATGGAGATGCTGCTGTAAACATGCCAAGAATGCGTGTTGGCGTGTTGATCTCAGGATCGGGAACAAACCTTCAAGCGTTGATTGACAGAAGTTTACGTTACGACAGCCATGCAGACATTGTTCTTGTCATCAGTAACAAGCCTGGGGTCCAAGGTCTCAAGCGGGCACAGGATGCTGGGATACCAACAATGGTCATCAAGCACAAGGATTTCAAGAACCGTGTTGACTTTGACATGGCTGTACACGCGGCACTGGAGGACGCCCAAGTGGAACTCGTGTGTCTAGCTGGCTTCATGCGGATACTTTCTGGCGACTTTGTGCGCAAGTGGCGAGGCCGACTGCTTAATATTCATCCGTCCCTCTTACCTTCCTTTAAGGGTATAGATGCCCACCAGCAAGTGCTCGCGGCAGGAGTCTGTATTTCAGGATGCACTGTCCATTTTGTTGTGGAGGAAGTGGATGCGGGTGCAATAATCACGCAGGAAGCAGTGCCTGTGTTGCCAGGGGATACGGTCCAGAGCTTACAAGAACGGGTAAAGACCGCTGAGCATCGTGCCTACCCGCGGGCTCTTGAACTGTTGGCCAGCGGAAAGGCTCGGCTTGATGTAAATGGAAAAGTGGAGTTAACAGCATAGTATGGAGACGCAACAGGCATCCCATTGACTTGTCATGGTTGCATAGCAGAGCCCCCTGTGGCCGACCCTCGCTACACGCCTGTGATAAATAGCTGGCGCAAATGGTAGATCTCCATGAATAGTTACTGTAAGCATCTGTTTCCATGAACAAATCTTTATAGTGTCTTTGTCAGCCGCTATTTTGTCGTCATAGCAAATTACCATGTGTGATAAATTATcgatttccatcggcttagtTTGGAAGGCTGTGTAATTTAGTGATAATATACTGGGTGTCTATTCTCAATGTTGCATTAGGCTTGGTAAGCGTTTTATGTCTATATAAACTGACATACTAGTATGATTTGTCTAAAACAAGTATTCTCCTGGGTCCAGTTCCTAGAAAgcgggttagcgctaacccagggataaatcGGCTATCTTTGCAAAAAGGgcatttatccctgggttagcgttaatCTGCTTTCTAGTAACGCGGCCCTGAAGTTAATGATCACAATGGTGCGGTTTACTAGGGCTTACCAAGCGTCAAGACGTCTGACGAATAGCTTGACATCAATAGGGAACTTGCGCTAAAAGATCATGTAActtttctgggtggcaaattcaaaacaaattaatcaaacaaaaaatcagaagTAACTGCGCCTGTCACACTAGAAAGCgaccaaaaaataaaatctttagaTGAAACTaaactctaaaaaaaaaaaaaaaaaaaaattctggcctttttcgtaagcgctgaataagttgctttttgtttctgttattataaaagcctgagcgcgctctattttgccacccaaacagtcacgtgaccccttagcgcaagtccccaaTTGTACAAAGACAAATGATTTCTACTGCTGTAGGGGTCTTCTTTGCTTTTGTAATAATCCAATAAAACCCCGATAACCCCAACTTTATACAATACAACCCCGCTATTGCGAACTTAACTCAGATCGAGTTATAGGTTCGATTGAAATGCTCATAGCCTCATTCATCATGAACAAAGTATCGATATCCATATAAATGCGTGGTGGCCCTCCCGTTGAAGTAATTTACTTAATGAAATTCctattactgtcgaatccgttgtatcgcgacgcctcatttcaaaacatcgatttgtttttgtcttgtgGGATTTtatgttccgccagtcaaattattccaAGCCAATCAGATTTATGCCATCTCTCGACTaatgcagttgcctggctttctgtcgcgacactgtctggttttcgtccagagggaagccagggaagtgcacaaagcgagattccgattggctcagaatggttttactgacggaacagaaaaccaaaacaattcgtgctttgaaaacgcgggtcgcgatataacggattcgacagctatttttgacaaataaagaaaatgaattttaagcagagtggttttcaaaatctaaaaatttaattgttaaagtgtaatagtcaagtcaaaacaaaaaggaacaaagacattacagtgcaTCAGTATTAAATAGTATTTCGTGGATTTTTGAAAACCAGTCTAGTCAAAGAAACGAACAATGTATTTAGTTTGCGGGGAGATCCGAATTGGAGTTATtagggttctactgtatttagCGAGGAGATCTAGTTATGAGTTCATATTGCATTAAAAGTTCATGTTGTATTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P21872	Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus gallus OX=9031 GN=GART PE=1 SV=1
Q64737	Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=3
P22102	Trifunctional purine biosynthetic protein adenosine-3 OS=Homo sapiens OX=9606 GN=GART PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002861 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF02843 all species →	GARS_C	Phosphoribosylglycinamide synthetase, C domain	Domain	Interproscan
PF00586 all species →	AIRS	AIR synthase related protein, N-terminal domain	Domain	Interproscan
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF01071 all species →	GARS_A	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Domain	Interproscan
PF02844 all species →	GARS_N	Phosphoribosylglycinamide synthetase, N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR001555 all species →	Active_site	Phosphoribosylglycinamide formyltransferase, active site	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR004733 all species →	Family	Phosphoribosylformylglycinamidine cyclo-ligase	Interproscan
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR037123 all species →	Homologous_superfamily	Phosphoribosylglycinamide synthetase, C-domain superfamily	Interproscan
IPR020560 all species →	Domain	Phosphoribosylglycinamide synthetase, C-domain	Interproscan
IPR004607 all species →	Family	Phosphoribosylglycinamide formyltransferase	Interproscan
IPR000115 all species →	Family	Phosphoribosylglycinamide synthetase	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR016188 all species →	Domain	PurM-like, N-terminal domain	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR020561 all species →	Domain	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain	Interproscan
IPR020559 all species →	Conserved_site	Phosphoribosylglycinamide synthetase, conserved site	Interproscan
IPR020562 all species →	Domain	Phosphoribosylglycinamide synthetase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10520 all species →	TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004641 all species →	Molecular Function	phosphoribosylformylglycinamidine cyclo-ligase activity	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0004637 all species →	Molecular Function	phosphoribosylamine-glycine ligase activity	Interproscan
GO:0009113 all species →	Biological Process	purine nucleobase biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0046084 all species →	Biological Process	adenine biosynthetic process	Interproscan
GO:0004644 all species →	Molecular Function	phosphoribosylglycinamide formyltransferase activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11787	GART; phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase	EC:6.3.4.13 EC:2.1.2.2 EC:6.3.3.1	Antifolate resistance	ko01523	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032234831.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

39TPM > 0

16Conditions

10.1Max TPM

4.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	5.18	6.04
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	3.40	4.16
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	1.53	1.73
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	3.53	4.30
whole 6 week old aboral regenerate · regenerate uncut	3	3	2.16	2.59
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	1.64	4.91
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	2.82	4.59
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	8.79	9.82
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	6.92	8.12
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	3.84	6.17
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	3.50	4.07
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	4.33	6.65
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	7.56	10.05
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	6.31	9.92
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	2.75	4.31
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.15	3.46

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	6.04
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.93
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.58
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.16
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.11
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.92
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.73
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.69
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.18
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.30
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.90
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	2.39
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.59
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.21
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.69
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	4.91
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	4.59
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	3.87
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.82
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.16
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.40
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	8.12
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.95
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	5.68
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.17
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.36
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.07
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	3.51
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	2.92
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.65
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.33
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.05
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.71
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.92
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	9.92
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	9.01
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	4.31
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.93
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	3.46
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.