Genomic Location: NC_064037.1:13831045...13848311
NR annotation: XP_032236018.2, ataxin-2-like protein isoform X1 [Nematostella vectensis]
| CDS | |||||
| LOC5510916 | |||||
| Transcript |
| rna-XM_032380127.2 |
| Protein |
| XP_032236018.2 |
| Uniprot term | Description |
|---|---|
| Q99700 | Ataxin-2 OS=Homo sapiens OX=9606 GN=ATXN2 PE=1 SV=2 |
| Q7TQH0 | Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 |
| O70305 | Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06741 | LsmAD | LsmAD domain | Domain | Interproscan |
| PF14438 | SM-ATX | Ataxin 2 SM domain | Domain | Interproscan |
| PF07145 | PAM2 | Ataxin-2 C-terminal region | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR045117 | Family | Ataxin2-like | Interproscan |
| IPR009604 | Domain | LsmAD domain | Interproscan |
| IPR025852 | Domain | Ataxin 2, SM domain | Interproscan |
| IPR009818 | Domain | Ataxin-2, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12854 | ATAXIN 2-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0010494 | Cellular Component | cytoplasmic stress granule | Interproscan |
| GO:0034063 | Biological Process | stress granule assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K23625 | ATXN2_2L; ataxin 2/2L | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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