Detailed information of XP_032236077.2 in Nematostella vectensis

Genomic Location: NC_064042.1:5280279...5287737
NR annotation: XP_032236077.2, hormone-sensitive lipase [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R101Hormone-sensitive lipase OS=Ictidomys tridecemlineatus OX=43179 GN=LIPE PE=2 SV=1
P54310Hormone-sensitive lipase OS=Mus musculus OX=10090 GN=Lipe PE=1 SV=2
Q68J42Hormone-sensitive lipase OS=Sus scrofa OX=9823 GN=LIPE PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006016 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06350
all species →
HSL_NHormone-sensitive lipase (HSL) N-terminusFamilyInterproscan
PF07859
all species →
Abhydrolase_3alpha/beta hydrolase foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029058
all species →
Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR010468
all species →
DomainHormone-sensitive lipase, N-terminalInterproscan
IPR002168
all species →
Active_siteLipase, GDXG, putative histidine active siteInterproscan
IPR013094
all species →
DomainAlpha/beta hydrolase fold-3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23025
all species →
TRIACYLGLYCEROL LIPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004771
all species →
Molecular Functionsterol ester esterase activityInterproscan
GO:0004806
all species →
Molecular Functiontriacylglycerol lipase activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0019433
all species →
Biological Processtriglyceride catabolic processInterproscan
GO:0008203
all species →
Biological Processcholesterol metabolic processInterproscan
GO:0016042
all species →
Biological Processlipid catabolic processInterproscan
GO:0016298
all species →
Molecular Functionlipase activityInterproscan
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07188LIPE, HSL; hormone-sensitive lipaseEC:3.1.1.79
Thermogenesisko04714deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032236077.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples
38TPM > 0
16Conditions
6.4Max TPM
3.2Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole 6 week old aboral regenerate · regenerate 96hpa 3 3 4.57 6.38
whole 6 week old aboral regenerate · regenerate 144hpa 3 3 3.59 5.23
whole 6 week old aboral regenerate · regenerate 0hpa 3 3 4.31 4.76
whole 6 week old aboral regenerate · regenerate 2hpa 3 3 4.06 5.12
whole 6 week old aboral regenerate · regenerate uncut 3 3 2.99 3.73
whole 6 week old aboral regenerate · regenerate 4hpa 3 1 1.41 4.22
whole 6 week old aboral regenerate · regenerate 120hpa 3 2 3.46 5.76
whole 6 week old aboral regenerate · regenerate 36hpa 3 3 4.03 4.94
whole 6 week old aboral regenerate · regenerate 24hpa 3 2 2.64 4.50
whole 6 week old aboral regenerate · regenerate 20hpa 3 3 3.28 3.50
whole 6 week old aboral regenerate · regenerate 16hpa 3 3 3.11 3.55
whole 6 week old aboral regenerate · regenerate 72hpa 3 2 2.90 4.54
whole 6 week old aboral regenerate · regenerate 60hpa 3 3 4.08 4.86
whole 6 week old aboral regenerate · regenerate 48hpa 3 1 1.71 5.13
whole 6 week old aboral regenerate · regenerate 8hpa 3 2 2.99 5.34
whole 6 week old aboral regenerate · regenerate 12hpa 3 1 1.31 3.93

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

TOP