Gene detail

Detailed information of XP_032236166.2 in Nematostella vectensis

Genomic Location: NC_064037.1:13493865...13526754
NR annotation: XP_032236166.2, polyhomeotic-proximal chromatin protein isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5511024

ATGACTATGCACAGGGAATCGATGGAAGAGTTAGACTTATTAAAGTCTAACTCGGCGGCAACTTCGGCGAACTTGGAATCTGAGAGCTCGGGACAAAGCAACGAATCCACTGTCAAAAGCGTTCTCTCGGCACTCATAGAAGAGAACCTTTCCAAGCTGTTTGAATGCCTTAAAGTGGAATATGGAAAGCATGTTCTGGTGTCCCCAAAGTGGAAAAACTTTGGGAGTCAAAAGCTTGCATTTTCTGAGAAGACCAGACTAAACAACGCCATATGGAGATGTTGGCATTTGCAGTTCAAGAAAGGGAAAAAGCCATTGTTTTGCCAATTTGTCTCGCCATTATCAGAGGAGCGTGAACCTCCAAAGAATACCCATCTAGCAGTGATTCTTGAGGGGAGGTACTGGAGACGTAAATTGGATGCTGTAGCAAGAGAGTACAAGCGATGGCGGGTTTACTACAAGAAAAAGACCCAGGAAGCTGAGGAAGCAGACCGCCAAAGATTAAGGAGTTTGAGCATCAGTAGTGGAGATGAAACAGTTTCTAACCAGAGCCCAGCCATGGCTCAGATGATGCATATCATGGACACCCACATCAGTACAGATGTCATGCTCTCTTCACATCCTGATACCCTGTTCACCTCAAAAAGCAAGCACCAGCTGAAGGAAGAGAGGCAGACACCAAGGGATCTTATTCAGCAAGATGAGACCTTCACAAGTTCCCCGAGAATGGCCAGTCAGAGATTCTCTGCAGAAGATGTCAATTATCAACAACAATCCCACCTGGAAGTGATGGAACACTCCACTGACTACCCAACAAGCTGTCGACAAGAATACATGGATACATCTGGCTCTTACAATGATTACTCTGTGGAATACCAGGATATGGAGCAACCGGAAAGCCTTCCCGAGGAACCTATGCCCCAACTAGTGGAAGAAAACTCTCAAGAGATGTACAGTCCACAACCTCAGGAGTCGTTTGAGCAGCTGACTTCACCAGTGCAATCACCACTGGGCTCCTCTTTGCATGGGGTACCTCCCAACTCAGTCCCGCAGTCGCCTGTGCAGCGAAGCCCAAGTGCAATGAGCCCACCTAGTCTGGGTACCTCTCAGTACAAGGCCAGCAGTGTAACAACGCAGCACCGGCAGTCTTTCACTCCTGGCTCATCCATGTTAAGTCAGCAGACAGAGAATGTGAAGATTACGAGGAATGTTTCAGACAGTCAGTTGTATAATATGGAAAGCTATGGGAGCCCACTGAAAGGCGTCTCTCTTCTTCCCCAGTATGAGCCTGAATTGCCAGCGCAGGTGCAATTTCCCAACCTGGTTGCTCAGTTGCAATCAATACAAAGCAAGCGCCCAGAGGTACAGGCAAGCTCCTCCAAGGTAGCCAAGAGGGCCAGACTTCCAAGAAACATGTCGGATTCAAGGCTGAGCAGCATGGGCAGAGTGTCTAGGAGCTCTTCCCTGCATAATCAGAGTGCAGTAGGGACAGCAAATATGACACCACTTGAGCAGATCCGTGCTCAGGCCATTGCACAAGGCACCATGCCACAGGGTCCTACGTACCAAGTAATGCCAAGATTCCAAACCCCCGTGGGCCACACCAAGGTACCCAGCTACAAAAGGAAAAGCAAGATGCCACGGAATATGTCAGACTCGTCACTCTTGTACATGGGTTTACCACAGCAACATCCGCAGCCGTCTTCATCTTGGATCGGACAGCGAGTGCGTAAAATGTCTGAGCCTAGTTTAGAGGTTGCAAGCTCTATGGCACAGCAAGCCTTCTCACAGCAGCTTGTGGCAGAGAGTCTGACGCCTACATCAACACAACTGGTACACTCACTTGCAAGCGGGGTGCGAGAATCACATTCAACATTGATAGACCAGTTGAGTCAGATGTCGCAGGCCTCAGCGCAAGTCCCTACTTCAGCGGGTATTACATCAGTTCCAGGAGTAGTAGGGGCAGGGAGCCTTCTGGGACAGTTATTGCTACAGAATGGGAATCAGTCCGAAGCAGCAGCCATGACGACTACTGTTGATGACAGTAGCCAAGTGATGAAGCAACTGTTACAGCTTATTCAACGACAGCAACACCAACAACAGCAGCAGCAACAACAGCAGCAGCAGCAGTCAAGTCAAGCCATGCATAGCGGGGAGCTACTTGCATTGCTTAAAGCTGTAGCTCAGGGTGACTCATGTAGCGATGTGGCATCATTGTTGCAAGCATCTTTACAGGAAGGCAACCAGTCTCAACGACAACAACTTAGTCTACATAATCAGCAGATGCAACAGCAACAGATTCAGCAACAGCAGCAGCTGCAACAGTTGTTACAACACCAGCAATTACAAAAACAAGCTCCTTATGCTCAACAGTCATCCCAGCTAGGTACAATCCAGCAGACAGCACAAGCATTGCAGCAGCAGTCCACCCAGTCTCACCAAAAGCAGACTCAACCACAGCAACTTAGCCCGCTACAGCCCTTTGCACCACAGACATCTCAACCCCTGACTCAGCTGCTTCAGCAGGGTGCCCAGTCACTGCCCCAACTTGTGGCCCAGATTTCAACAATGCCAGTAGTTCAGATGTCAAACCTCGGTATCCAGACGGTAGCACCGGTGGTTAGGACCACGCCCATAGCGATAGCCCCTCATCCTGGCACTGCAGTGATGGCAGCACCCATACATGCAAGCTCGGTGCTGTCGACCCAGTATTCTTTGCCGATAATGACAAGTGCCACTCAGGGATCAAAGTTCGCCGTCACACCTCTTCAGCAAATACTTAGAAGCACATCGCCTAGTCTGGCAGCTATGGCATCAGAGCCAAGCCCAGCACCAGGCTATCAGCAGTTTCAGGTATCAAACAACGAACAGTCCTTCACATCATCATTCAGTGACCCACCTGGCGAACACGAACTCTCATTTGTGTCATCCAATGTGAGCACATTTTCGGCAAGCACCACGGCACAGCCAACAACTGTGTTCCGACAACCCCTCACCACCCCTAGTGCATCCAAGACCCAAAGAACGAAAGTATCCGATCGAGAGCAATACAAGGAACATCGACGTATGTCCCACATTTCTGCCGAGCAGAAGCGAAGATGTAACATCAAGATGGGCTTTGACCAACTGGCATCTATGGTCCCTACCCTAGCCAGCCAGAAAAGCTCCAAAGTCAGCAAAGCCACCGTTCTCCAGAAAACGGTTGATTACACGACCAGGCTGCAGCAGGAGCGGCAGAGCATGGCGGACGAGGAAGCGCGACTGAAGAAGGAAATACAAGAACTCAACACCTCCATCAACACCTGTCAATCACAGCTCCCGGCCACAGGTGCCCCGGTCAGCCGGCAGCGAGTGGATCAGATGCTGACGTTGTTCAGTAATCATGTGAAAGACAGAACGCAGGAAAACTTCAAATTCTGGATTTTCAGCGTGCTTCTGCGACAGTTGTTTGAGTCATATAATAGCTCCGTATCCACAACAAACCCAGAGGAGTTCTGCCGTACGGTCCTTGCTTGGCTGGACCAACACTGTACCCTACCATCTCTGAGACCAGCCGTTCTTGCTGCGTTACGAGACATTAGCCGGACTACATCAATCCTCTCGGACCCCTCCCTGGTACCAGGAGAGGCCCGCCAAGCAGCCAGTGGGAGTGACCCCACTAACCTTTCCGACAGCGGAGCTTCAGCAGGGCGCGGGGCCGTTGCGGAGAACTTCTTCGGTGGCGGAGCTGGGTAG

Transcript

rna-XM_032380275.2

ATGTCACGTGATTTTGTGTACCTtcttcaagatggcggacgtgAGATCTCACGAATAACATCAGACGGATTtcagcaaaaaaaatcacttgTGCGACTGAAACACAATCTTCGATGGAACTAAAGTAAAACGTATTAGGTCACGTATGACTATGCACAGGGAATCGATGGAAGAGTTAGACTTATTAAAGTCTAACTCGGCGGCAACTTCGGCGAACTTGGAATCTGAGAGCTCGGGACAAAGCAACGAATCCACTGTCAAAAGCGTTCTCTCGGCACTCATAGAAGAGAACCTTTCCAAGCTGTTTGAATGCCTTAAAGTGGAATATGGAAAGCATGTTCTGGTGTCCCCAAAGTGGAAAAACTTTGGGAGTCAAAAGCTTGCATTTTCTGAGAAGACCAGACTAAACAACGCCATATGGAGATGTTGGCATTTGCAGTTCAAGAAAGGGAAAAAGCCATTGTTTTGCCAATTTGTCTCGCCATTATCAGAGGAGCGTGAACCTCCAAAGAATACCCATCTAGCAGTGATTCTTGAGGGGAGGTACTGGAGACGTAAATTGGATGCTGTAGCAAGAGAGTACAAGCGATGGCGGGTTTACTACAAGAAAAAGACCCAGGAAGCTGAGGAAGCAGACCGCCAAAGATTAAGGAGTTTGAGCATCAGTAGTGGAGATGAAACAGTTTCTAACCAGAGCCCAGCCATGGCTCAGATGATGCATATCATGGACACCCACATCAGTACAGATGTCATGCTCTCTTCACATCCTGATACCCTGTTCACCTCAAAAAGCAAGCACCAGCTGAAGGAAGAGAGGCAGACACCAAGGGaTCTTATTCAGCAAGATGAGACCTTCACAAGTTCCCCGAGAATGGCCAGTCAGAGATTCTCTGCAGAAGATGTCAATTATCAACAACAATCCCACCTGGAAGTGATGGAACACTCCACTGACTACCCAACAAGCTGTCGACAAGAATACATGGATACATCTGGCTCTTACAATGATTACTCTGTGGAATACCAGGATATGGAGCAACCGGAAAGCCTTCCCGAGGAACCTATGCCCCAACTAGTGGAAGAAAACTCTCAAGAGATGTACAGTCCACAACCTCAGGAGTCGTTTGAGCAGCTGACTTCACCAGTGCAATCACCACTGGGCTCCTCTTTGCATGGGGTACCTCCCAACTCAGTCCCGCAGTCGCCTGTGCAGCGAAGCCCAAGTGCAATGAGCCCACCTAGTCTGGGTACCTCTCAGTACAAGGCCAGCAGTGTAACAACGCAGCACCGGCAGTCTTTCACTCCTGGCTCATCCATGTTAAGTCAGCAGACAGAGAATGTGAAGATTACGAGGAATGTTTCAGACAGTCAGTTGTATAATATGGAAAGCTATGGGAGCCCACTGAAAGGCGTCTCTCTTCTTCCCCAGTATGAGCCTGAATTGCCAGCGCAGGTGCAATTTCCCAACCTGGTTGCTCAGTTGCAATCAATACAAAGCAAGCGCCCAGAGGTACAGGCAAGCTCCTCCAAGGTAGCCAAGAGGGCCAGACTTCCAAGAAACATGTCGGATTCAAGGCTGAGCAGCATGGGCAGAGTGTCTAGGAGCTCTTCCCTGCATAATCAGAGTGCAGTAGGGACAGCAAATATGACACCACTTGAGCAGATCCGTGCTCAGGCCATTGCACAAGGCACCATGCCACAGGGTCCTACGTACCAAGTAATGCCAAGATTCCAAACCCCCGTGGGCCACACCAAGGTACCCAGCTACAAAAGGAAAAGCAAGATGCCACGGAATATGTCAGACTCGTCACTCTTGTACATGGGTTTACCACAGCAACATCCGCAGCCGTCTTCATCTTGGATCGGACAGCGAGTGCGTAAAATGTCTGAGCCTAGTTTAGAGGTTGCAAGCTCTATGGCACAGCAAGCCTTCTCACAGCAGCTTGTGGCAGAGAGTCTGACGCCTACATCAACACAACTGGTACACTCACTTGCAAGCGGGGTGCGAGAATCACATTCAACATTGATAGACCAGTTGAGTCAGATGTCGCAGGCCTCAGCGCAAGTCCCTACTTCAGCGGGTATTACATCAGTTCCAGGAGTAGTAGGGGCAGGGAGCCTTCTGGGACAGTTATTGCTACAGAATGGGAATCAGTCCGAAGCAGCAGCCATGACGACTACTGTTGATGACAGTAGCCAAGTGATGAAGCAACTGTTACAGCTTATTCAACGACagcaacaccaacaacagcagcagcaacaacagcagcagcagcagtcAAGTCAAGCCATGCATAGCGGGGAGCTACTTGCATTGCTTAAAGCTGTAGCTCAGGGTGACTCATGTAGCGATGTGGCATCATTGTTGCAAGCATCTTTACAGGAAGGCAACCAGTCTCAACGACAACAACTTAGTCTACATAATCAGCAGATGCAACAGCAACAGATtcagcaacagcagcagctGCAACAGTTGTTACAACACCAGCAATTACAAAAACAAGCTCCTTATGCTCAACAGTCATCCCAGCTAGGTACAATCCAGCAGACAGCACAAGCATTGCAGCAGCAGTCCACCCAGTCTCACCAAAAGCAGACTCAACCACAGCAACTTAGCCCGCTACAGCCCTTTGCACCACAGACATCTCAACCCCTGACTCAGCTGCTTCAGCAGGGTGCCCAGTCACTGCCCCAACTTGTGGCCCAGATTTCAACAATGCCAGTAGTTCAGATGTCAAACCTCGGTATCCAGACGGTAGCACCGGTGGTTAGGACCACGCCCATAGCGATAGCCCCTCATCCTGGCACTGCAGTGATGGCAGCACCCATACATGCAAGCTCGGTGCTGTCGACCCAGTATTCTTTGCCGATAATGACAAGTGCCACTCAGGGATCAAAGTTCGCCGTCACACCTCTTCAGCAAATACTTAGAAGCACATCGCCTAGTCTGGCAGCTATGGCATCAGAGCCAAGCCCAGCACCAGGCTATCAGCAGTTTCAGGTATCAAACAACGAACAGTCCTTCACATCATCATTCAGTGACCCACCTGGCGAACACGAACTCTCATTTGTGTCATCCAATGTGAGCACATTTTCGGCAAGCACCACGGCACAGCCAACAACTGTGTTCCGACAACCCCTCACCACCCCTagTGCATCCAAGACCCAAAGAACGAAAGTATCCGATCGAGAGCAATACAAGGAACATCGACGTATGTCCCACATTTCTGCCGAGCAGAAGCGAAGATGTAACATCAAGATGGGCTTTGACCAACTGGCATCTATGGTCCCTACCCTAGCCAGCCAGAAAAGCTCCAAAGTCAGCAAAGCCACCGTTCTCCAGAAAACGGTTGATTACACGACCAGGCTGCAGCAGGAGCGGCAGAGCATGGCGGACGAGGAAGCGCGACTGAAGAAGGAAATACAAGAACTCAACACCTCCATCAAcacctgtcaatcacagcTCCCGGCCACAGGTGCCCCGGTCAGCCGGCAGCGAGTGGATCAGATGCTGACGTTGTTCAGTAATCATGTGAAAGACAGAACGCAGGAAAACTTCAAATTCTGGATTTTCAGCGTGCTTCTGCGACAGTTGTTTGAGTCATATAATAGCTCCGTATCCACAACAAACCCAGAGGAGTTCTGCCGTACGGTCCTTGCTTGGCTGGACCAACACTGTACCCTACCATCTCTGAGACCAGCCGTTCTTGCTGCGTTACGAGACATTAGCCGGACTACATCAATCCTCTCGGACCCCTCCCTGGTACCAGGAGAGGCCCGCCAAGCAGCCAGTGGGAGTGACCCCACTAACCTTTCCGACAGCGGAGCTTCAGCAGGGCGCGGGGCCGTTGCGGAGAACTTCTTCGGTGGCGGAGCTGGGTAGCTCGTCTACATAACATGTAGAGATAACTTGTGGATGCTTTGTTAATATATAACTCCTCCGGCCGGTCTTGATAGTCGCGACCCAAGGATAACTGTTATTAACCCTACAAATTAAGTAACTCTATAAACACTTTAATTTATGTATCTTTATGTATCTCGAACTTGTTTGGACGCAAATATGCTCGGGCCTCTATCTTATGTAGTAACAAAACATATATTCTAAGAATCCTTAGTATGTTAAGAAACTGGTTTTGGGTGTTAACGTAGCGAAAAACTTTTCCATAATGTCCATATTGTCACATTTTGGGGGAAtgaatgatattttttttgttatttaacAGCAAGAATATTGAAGTAAACTGCTAGCCTaacattagtttttttttcttgtaaaaatgtaaaaagctatatataaatatatatattcgcGCATATTTTGCGCATTTAAAGTATAAAAGACAACCAAGAGGCTTGAAGGGTTTGAAGTTCCGTTATTGGGACTATTAACATTAAAGCTAGACCATACGAAACGAAATGTTCGACTTTTCTGCGAGAAAGAAAGAGCTAATATAAACATCTGCAGGCAAAAATATGATTAAAATCATAATCTTATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VIP2	Carbohydrate-responsive element-binding protein OS=Rattus norvegicus OX=10116 GN=Mlxipl PE=1 SV=1
Q99MZ3	Carbohydrate-responsive element-binding protein OS=Mus musculus OX=10090 GN=Mlxipl PE=1 SV=1
Q9NP71	Carbohydrate-responsive element-binding protein OS=Homo sapiens OX=9606 GN=MLXIPL PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006264 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR052207 all species →	Family	Max-like/E-box-binding transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15741 all species →	BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09113	MLX; MAX-like protein X	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032236166.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

11.2Max TPM

6.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	8.24	9.36
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	6.31	9.18
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	6.83	7.77
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	7.13	8.47
whole 6 week old aboral regenerate · regenerate uncut	3	3	5.99	7.19
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	9.07	10.82
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	7.52	9.15
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	8.25	8.53
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	6.06	9.16
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	8.43	9.03
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	7.74	8.14
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	5.02	7.78
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	8.47	9.85
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	4.73	8.65
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	6.85	11.24
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.72	8.17

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.36
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.29
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.09
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	9.18
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.18
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.56
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.77
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	6.67
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	6.05
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.47
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.66
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.25
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.19
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.72
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.05
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	10.82
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.83
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.58
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	9.15
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.73
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.67
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.53
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.47
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.76
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.16
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.02
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.03
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.84
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	7.43
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	8.14
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.65
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.41
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.78
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.28
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	9.85
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	8.31
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.23
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.65
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	5.53
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.24
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.31
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	8.17
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.