Gene detail

Detailed information of XP_032236483.2 in Nematostella vectensis

Genomic Location: NC_064037.1:17288252...17301635
NR annotation: XP_032236483.2, mediator of RNA polymerase II transcription subunit 16 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5511335

ATGGATCTAATTTACAGCACTGTCTGGGACACAGTTAAACCAACGAGAAGCGAGTTATGTGGGAAGGTTGCACTGTGCTGGTCATGTAGAAACCTTATTGCTTTCACAACTGGTCATAGAAAGATCTATAAGCAAGCAAAGAGTAAAGACAAGACAGAAAAGCAGCATTTCTGCAATGCAATTCACATTGTGGACCCTGATAAACCATGGGATGTATACAGTTTTGAGTCGGATCATGAGCACCTGATCCAGCATCTGCTGTGGGACGGAACAGGCTCCAGGCTGCTGTCCGTGGATGAAAGTGGAATGTGCCGACTCTGGGCCATGAAGGATTACCTTCTAAATGATTGGTACCAGGTGGCAGAGGCAGATGTCGGTGAAGGGGAAAGTCTCGTGTGTATTTCTTGGATTGATAGTGGGCTCAAGGTTCATTTTATTGAGGAACAGCATGCAACAAGCAAAAGGTTTGAGGATCATTTCAAGCCAAGTCTCAACAAGCCTCCATTCACTGAGTTCGGGGGAAAAGCCCAAGATGGATGGATATCTATCTCAGAAACTGGACTGATTTGTGTCACAAAGCTAAAACCCAAGACTCAGATAACAAGGAAACAACTTGCACCTGTCAGAAGCCACGTGGCTGTGTCTGACCTTGCATACACCAGCAATGGTAAAGTGATAGTTGCTACCAACAATGGAGATAAATCCACATCTGTCCAGTTTTACAGAGTTCAACTGAAGACAGGGCCAAAGCATTCCTGTCACATAGAATCTGTCCCTCTGCCATGCCTTTTCCCTCACTCAAGAGATGAACTTGAAAATTTTGCTGATTATGCTGTCACTGATATACAGTTTCTGTTAAAAAATTCTGGTGAATATGTTCTGGTCTGCACTACAGGGCCATTTGGTAGCTGCATCAAACGATGGGACATGAAAAAAGAAGGAATTCAACTCCACCAGAAATTCCAAAACTTCCAGTGCAGAGCTTGCACCCAACCACAAACATTTAGATGGTCCTGTGTTGCTACCTATATAGATGGGGCACAGATGACAGCTTTAGCGTTGCCACGACTTCCCTGCAAGGTGGATGACTACCCTGGCATCACATATCCCAACAAGTCCCTTGCCGTTGGCCTGGACAATGAAAAGATACAAGTGCTCAAGATAGAGGCCAAGGCTGAACGACGCTACCTGTTGCCTGTCGGTGCCTTCCACCTGCAAACAAAGCTCCAACTTGACAGCGAACAAGCACACAAGAAGACAGCTAGTGCACCCTACTCCACCTCTCAACATGGAACAGGTGTCATGGCTGCCTTGTGGTTCTCCCCGGCTTGCACATGCCTCGCGGGCGTCACCACCACTGGCCATCTCTCACTCTTTAAGTTTCAGCATGCAACAGAGGTTGTTGATAGAGCTCGATTCAAGAGGAATCTTGTGGATTTGTTTGAGTATTGCTTGATAACGGGTTGGGACTGGTGGGACGTTTTGATTGCTGCCCATATAGGAGCACCTCAAGACACTATCGATGGAGTGCTGAAGCAGCTCTTGGATGAGTTGAGTTACCAACACCCAATCAGCCAGCACATGATGGTGGCCAAGACAACAGCACTCAAGGCCAGTCTGTACAGATGTACCAAGGATGGTTCAGGTCAAGCTATGGACTGCTATGCTACACAGTTTCTCTTTGCTGTTGCACTTGCCTTAAGATCCCTGCCTTACTGTTCTCAATCAAACATGGAATTCCTTACGAAGACTTGTTCACGGGCTCAGGCGGATGCTGATATTGACAAGGTCATTGCAGGCTTGGAGAGCGAACAATACTCTGTAGACCCTGAAACTCTGACTGCAATGCATTCGTTAATAAAGTGGATAGCTGACCTGGCAATGTTCATAGTGGCTGCATTCACCACAAGACACACAAAGGGCTCCGTGCCTGGCGTGAGCCTTGGGCGAAACGCAGAAGTACTCGGCATTATCCGTGAGATGCTGGTGCTAATCCGTATATGGGGTGTGGCAACGCCTTCAATCGTACCCTCCATCACTCCTTCAGCAGATAAGAAAGACTCACTCGCCCTCCTATTCACCATCATCACAAAAATGTGGCATCACAGCAAGTCTACAGAAAGCCAAGAGATCGAGGAACGCCTGGCAGTGGAAGCTTCGCCATTACTGCCCAACCAGCTGTTCCTTCAAAACATGAAGGCACCAACTCTGAACCGAGGCATCTCTGGTAAGCCGGTCAGCGGTCAGGTGAAGCCAGCCTTGTACCAGTTCAATGTATCTCCTACTGGGCCCAGTGTGTGTCATAGCTACAACCCATTCGCGTCCGCCATCTTGCCTGTGGTCCCCGACAGTCCATACTTCTTGGACGTGGTTGGCCGAGTCTTTATAGACAGCAGTCCGAATGTACAGCTCAAGCAATGTACCAGGTGCAGCTGTGTATCACAGCTCAGAGGCAGCGGGACCAACCTCGCAATGAAAACATGGGACCAGCGATGGGTGAGATCCTGTGTATGCGGCGGCACCTGGAAAAGGTACACTGCGCCACAACCCTGA

Transcript

rna-XM_032380592.2

TATGTGAAGGCTTGGTTACATTTCAggcaagatggcggatccgTCTTGTAATGTCCGTAGCAGTTATTTGGGTTTCTAGTTTTTGACGAAGGTCGTAGTATCTATGTTTTGTTATGGATCTAATTTACAGCACTGTCTGGGACACAGTTAAACCAACGAGAAGCGAGTTATGTGGGAAGGTTGCACTGTGCTGGTCATGTAGAAACCTTATTGCTTTCACAACTGGTCATAGAAAGATCTATAAGCAAGCAAAGAGTAAAGACAAGACAGAAAAGCAGCATTTCTGCAATGCAATTCACATTGTGGACCCTGATAAACCATGGGATGTATACAGTTTTGAGTCGGATCATGAGCACCTGATCCAGCATCTGCTGTGGGACGGAACAGGCTCCAGGCTGCTGTCCGTGGATGAAAGTGGAATGTGCCGACTCTGGGCCATGAAGGATTACCTTCTAAATGATTGGTACCAGGTGGCAGAGGCAGATGTCGGTGAAGGGGAAAGTCTCGTGTGTATTTCTTGGATTGATAGTGGGCTCAAGGTTCATTTTATTGAGGAACAGCATGCAACAAGCAAAAGGTTTGAGGATCATTTCAAGCCAAGTCTCAACAAGCCTCCATTCACTGAGTTCGGGGGAAAAGCCCAAGATGGATGGATATCTATCTCAGAAACTGGACTGATTTGTGTCACAAAGCTAAAACCCAAGACTCAGATAACAAGGAAACAACTTGCACCTGTCAGAAGCCACGTGGCTGTGTCTGACCTTGCATACACCAGCAATGGTAAAGTGATAGTTGCTACCAACAATGGAGATAAATCCACATCTGTCCAGTTTTACAGAGTTCAACTGAAGACAGGGCCAAAGCATTCCTGTCACATAGAATCTGTCCCTCTGCCATGCCTTTTCCCTCACTCAAGAGATGAACTTGAAAATTTTGCTGATTATGCTGTCACTGATATACAGTTTCTGTTAAAAAATTCTGGTGAATATGTTCTGGTCTGCACTACAGGGCCATTTGGTAGCTGCATCAAACGATGGGACATGAAAAAAGAAGGAATTCAACTCCACCAGAAATTCCAAAACTTCCAGTGCAGAGCTTGCACCCAACCACAAACATTTAGATGGTCCTGTGTTGCTACCTATATAGATGGGGCACAGATGACAGCTTTAGCGTTGCCACGACTTCCCTGCAAGGTGGATGACTACCCTGGCATCACATATCCCAACAAGTCCCTTGCCGTTGGCCTGGACAATGAAAAGATACAAGTGCTCAAGATAGAGGCCAAGGCTGAACGACGCTACCTGTTGCCTGTCGGTGCCTTCCACCTGCAAACAAAGCTCCAACTTGACAGCGAACAAGCACACAAGAAGACAGCTAGTGCACCCTACTCCACCTCTCAACATGGAACAGGTGTCATGGCTGCCTTGTGGTTCTCCCCGGCTTGCACATGCCTCGCGGGCGTCACCACCACTGGCCATCTCTCACTCTTTAAGTTTCAGCATGCAACAGAGGTTGTTGATAGAGCTCGATTCAAGAGGAATCTTGTGGATTTGTTTGAGTATTGCTTGATAACGGGTTGGGACTGGTGGGACGTTTTGATTGCTGCCCATATAGGAGCACCTCAAGACACTATCGATGGAGTGCTGAAGCAGCTCTTGGATGAGTTGAGTTACCAACACCCAATCAGCCAGCACATGATGGTGGCCAAGACAACAGCACTCAAGGCCAGTCTGTACAGATGTACCAAGGATGGTTCAGGTCAAGCTATGGACTGCTATGCTACACAGTTTCTCTTTGCTGTTGCACTTGCCTTAAGATCCCTGCCTTACTGTTCTCAATCAAACATGGAATTCCTTACGAAGACTTGTTCACGGGCTCAGGCGGATGCTGATATTGACAAGGTCATTGCAGGCTTGGAGAGCGAACAATACTCTGTAGACCCTGAAACTCTGACTGCAATGCATTCGTTAATAAAGTGGATAGCTGACCTGGCAATGTTCATAGTGGCTGCATTCACCACAAGACACACAAAGGGCTCCGTGCCTGGCGTGAGCCTTGGGCGAAACGCAGAAGTACTCGGCATTATCCGTGAGATGCTGGTGCTAATCCGTATATGGGGTGTGGCAACGCCTTCAATCGTACCCTCCATCACTCCTTCAGCAGATAAGAAAGACTCACTCGCCCTCCtattcaccatcatcacaaaaatgtgGCATCACAGCAAGTCTACAGAAAGCCAAGAGATCGAGGAACGCCTGGCAGTGGAAGCTTCGCCATTACTGCCCAACCAGCTGTTCCTTCAAAACATGAAGGCACCAACTCTGAACCGAGGCATCTCTGGTAAGCCGGTCAGCGGTCAGGTGAAGCCAGCCTTGTACCAGTTCAATGTATCTCCTACTGGGCCCAGTGTGTGTCATAGCTACAACCCATTCGCGTCCGCCATCTTGCCTGTGGTCCCCGACAGTCCATACTTCTTGGACGTGGTTGGCCGAGTCTTTATAGACAGCAGTCCGAATGTACAGCTCAAGCAATGTACCAGGTGCAGCTGTGTATCACAGCTCAGAGGCAGCGGGACCAACCTCGCAATGAAAACATGGGACCAGCGATGGGTGAGATCCTGTGTATGCGGCGGCACCTGGAAAAGGTACACTGCGCCACAACCCTGAACCCTGTCTACGGGATTCAGTACATCATACGCAAGACCCCTGAATCGTATACGGGATGTAGTACGCATGCAAGAACCCCGAAACACCTTCTACGGGATTTAGTACGTCGCGCAAGAGCACTGAACTGTCTACGGGATTTAGTACTCGGAAAAGCCCTGGACCACCCTCTACGGGATTTAGTACATCACGCAAGAACCCTGAAGTTTTTGTGGGATTTAGTACATCCGGACTAGGTGCTTAAGTGGGGACTGGTTGCGTTGTTTCATTAGATATTCCAAGAAAAATCAACGTAAAGAGAGCAGCTTTTAGCTTTTCGTTGTATATTCTCGAAACAACCAAATCTGAGATTTGCTCTTACCATTAAAAATATTCATACAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08D69	Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus tropicalis OX=8364 GN=med16 PE=2 SV=1
Q6PGF3	Mediator of RNA polymerase II transcription subunit 16 OS=Mus musculus OX=10090 GN=Med16 PE=1 SV=2
Q9Y2X0	Mediator of RNA polymerase II transcription subunit 16 OS=Homo sapiens OX=9606 GN=MED16 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004885 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20718 all species →	Med16_bridge	Mediator complex subunit 16, central helical bridge	Domain	Interproscan
PF20719 all species →	Med16_C	Mediator complex subunit 16, C-terminal	Domain	Interproscan
PF11635 all species →	Med16_N	Mediator complex subunit 16, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048338 all species →	Family	Mediator complex, subunit Med16	Interproscan
IPR048616 all species →	Domain	Mediator of RNA polymerase II transcription subunit 16 , central helical bridge	Interproscan
IPR048339 all species →	Domain	Mediator complex subunit 16, C-terminal	Interproscan
IPR021665 all species →	Domain	Mediator complex, subunit Med16, N-terminal	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13224 all species →	THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15159	MED16; mediator of RNA polymerase II transcription subunit 16	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032236483.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

41TPM > 0

16Conditions

25.3Max TPM

15.9Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	20.70	23.75
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	15.43	20.38
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	19.34	20.59
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	16.42	16.58
whole 6 week old aboral regenerate · regenerate uncut	3	3	16.77	18.53
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	11.50	17.47
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	11.41	18.97
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	21.15	25.27
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	12.39	21.04
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	18.70	20.32
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	18.31	20.59
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	13.04	21.42
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	19.79	21.03
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	13.64	20.71
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	20.59	22.46
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	5.70	17.11

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	23.75
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	21.47
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.88
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	20.38
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.34
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	12.56
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	20.59
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	19.93
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	17.49
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	16.58
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	16.49
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	16.20
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	18.53
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	16.80
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.97
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	17.47
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	17.04
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	18.97
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	15.27
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	25.27
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	21.58
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	16.61
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	21.04
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	16.14
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	20.32
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	19.77
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	16.00
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	20.59
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	17.74
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	16.61
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	21.42
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	17.71
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	21.03
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	19.60
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	18.74
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	20.71
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	20.21
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	22.46
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	20.96
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	18.35
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	17.11
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.