Genomic Location: NC_064042.1:2353606...2370886
NR annotation: XP_032236886.2, ribosome biogenesis protein BMS1 homolog isoform X2 [Nematostella vectensis]
| CDS | |||||
| LOC5511692 | |||||
| Transcript |
| rna-XM_032380995.2 |
| Protein |
| XP_032236886.2 |
| Uniprot term | Description |
|---|---|
| Q14692 | Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX=9606 GN=BMS1 PE=1 SV=1 |
| O94653 | Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bms1 PE=1 SV=2 |
| Q08965 | Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BMS1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04950 | RIBIOP_C | 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal | Family | Interproscan |
| PF08142 | AARP2CN | AARP2CN (NUC121) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR030387 | Domain | Bms1/Tsr1-type G domain | Interproscan |
| IPR039761 | Family | Ribosome biogenesis protein Bms1/Tsr1 | Interproscan |
| IPR007034 | Domain | Ribosome biogenesis protein BMS1/TSR1, C-terminal | Interproscan |
| IPR037875 | Domain | Ribosome biogenesis protein Bms1, N-terminal | Interproscan |
| IPR012948 | Domain | AARP2CN | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12858 | RIBOSOME BIOGENESIS PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000462 | Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000479 | Biological Process | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0030686 | Cellular Component | 90S preribosome | Interproscan |
| GO:0034511 | Molecular Function | U3 snoRNA binding | Interproscan |
| GO:0042254 | Biological Process | ribosome biogenesis | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14569 | BMS1; ribosome biogenesis protein BMS1 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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