Gene detail

Detailed information of XP_032237408.2 in Nematostella vectensis

Genomic Location: NC_064043.1:1471876...1482998
NR annotation: XP_032237408.2, ubiquitin-protein ligase E3A isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5512130

ATGTCAAGTGATAACAACTGCTCGAAGACTGAATCAGAAAATTGTAAAACTTCAAGAGGATGCAGTGCAAAGAATGACATCAACCCTGAATCCAACAACATGAAACGAGCAGAGCACTTGATAAAGCAGTACTTCTTCCAGCTGACAGATGGATGTGGTACGCCTGGCTGTGAAAATGAGAACTGCGCATCAAGTGGCCGCATTGGTAACCTTAGCAAAAATGAAGCAGCCGCCATGGCCTTGCAACTGTGTCAAAAGAAAGCCCGCCTGTGTGTCCTTAACCAGCCAAAGTCCAAACCAGAAAACAGTCATCTTAACAACCACGCAGTCATTGAAGTCCCGTTCTTCACAGAAGAGTCCCTGCTATCTACTCTCAAGACTTGCAGAGATGAGGGGAGCTTCAAGAAGCTTGTTCATAGTATAGGTCAGGTATTCTCAAGTTCGGAGTCCCTTAATCAGAGCTTCCTACTCCCTACCCCTGCAAAGAGTTGTGGAATCCAAGTCTATGTTGATATCGAAGCTGTTAGGCGGTGCTACAAGGCACTCTTTGAAATAGGGGACGGCTCAATAGAGAATGCACTTCTTAATGCCTTGGTCAACCTTTCCCCTGAACTTGAGGTAGAAGTGAGATATAAGAACCCTTCTGCTAACCCACACTACATCAACCAATTCTTGATCATTATGGAAAATACAATGCTGCACAGTCCTGAATACCTGGAATCTGGACTTCCGAGCTTTTTGAAAGCCATGAGTCATCTGCCTGTGCCTGCTCAAGGACAGTTGGTGAAGATATGGTCCTGGTACCCTGTGGATCACATTAGACGCATGCTTGAGAGCCTTCAACAGCTCATCACATACCAGGTATTGACAGGACCAGCTGCAGTAGGGACTGCGCCGGTACATGAAGATGATGCTATTGTCAGTGCTACAAAGGTTATGAAGCTGATATACTTTGCTAGCATAATGGGTGGAGAGAGGCGTAATACGGTCACCATGGAGCAGGAAGCTGCAGTGGTGACACCAAGCGGAGCTTTCTTGGAAGACCCTTTGATGAAGGAACTTCAGCTCTTATCAATGGACTGCCGCCAGCCTTTGATTGATTATGAAGAATTTGTTAATGAACCACTGAATGACCAAATTGAAGTTGATAGGGATTTTACTCATTTCAAAAGTGAACAGCAAGGAAGGTTTTCCTTTCTAAGTCATAACTTTTTACTGAGTACAGCTACAAAGAGCTTAGGTCTGTTTTTTGACAACCGGGTTCGTATGTACAGTGAGCGTCGGCTAACACTTCTTTATAGCTTAGTGAGAAGGCAACAACCAACTCCTTATCTGCGCCTAAAAGTCAGAAGGGACCACCTTATAGAAGACGCCCTTGTCAGTCTAGAAATGGTTGCGCAGGATAATCCACTGGACCTGAAAAAACAGCTGTTTGTTGAGTTTGAAGGGGAGCAGGGTATTGACGAAGGGGGTGTGTCCAAAGAGTTTTTCCAGCTCATTGTTGAACAGATATTCAATCCAGACTATGGCATGTTTACTTATGATGAAGCAACAAGAATATGCTGGTTCAACCCAACATCATTTGAGAGTGATGCTCAATTCTGTCTGATTGGCCTGGTTCTGGGCCTTGCCATCTATAATAATATCATTCTGGATATCCACTTTCCTATGGTGGTCTATAGGAAGCTGTTTGGAAAGCCAGGCACTGTAGAAGACCTAAAGGATTCACATCCAGTTCTGTACATGAGTTTAACAGAGCTGTTGACTTATGAGGGCAATGTGGAGGAAGACCTTATGTGTACCTTCAAGATTGGCTACACTGATGTGTTTGGATCTGATCTGACCCATGAGCTTAAGGCGAATGGAGAGAGCATACCCGTCACCAAGGAGAACAGACAGTTCACTGCATTCAAGCGTGGGTTTGATATGGTGGTAGATGAGTCCCCCCTGAAGATATTTTTCCGTCCTGATGAGGTTGAGATGCTTGTCTGTGGTAGCAAGGATTTTGATTTTGATGCGCTAGAGAAGGCAACTGAGTATGATGGTGGACTAACAAAGGACTCTGCCCTTATAAGGTGGTTCTGGGAGATTGTACACAGCTTTGATATGGAGCAGAAGAGGCAGCTGTTGATGTTTACCACTGGCAGCGACCGCATCCCTGTTGGTGGGCTCGCCAAACTCAAGCTGATCATCGCCAAAAACGGGCCAGACTCTCCTAGATTGCCTACCGCCCATACATGTTTTAATGTGCTGCTGCTCCCGGACTATGCCACCAAAGAGAAGCTTGAGGAACGTCTTTTAAAAGCCATCACACACGCAAAAGGATTTGGCCTGCTTTGA

Transcript

rna-XM_032381517.2

GCGCTCACACGCTCTCTTCTCTGAAGCCACAGACATGAAAAATAACTAAATATAACGACGAATTTACCCATCCAAAATAACAATAGCTATCCTGAATGTCAAGTGATAACAACTGCTCGAAGACTGAATCAGAAAATTGTAAAACTTCAAGAGGATGCAGTGCAAAGAATGACATCAACCCTGAATCCAACAACATGAAACGAGCAGAGCACTTGATAAAGCAGTACTTCTTCCAGCTGACAGATGGATGTGGTACGCCTGGCTGTGAAAATGAGAACTGCGCATCAAGTGGCCGCATTGGTAACCTTAGCAAAAATGAAGCAGCCGCCATGGCCTTGCAACTGTGTCAAAAGAAAGCCCGCCTGTGTGTCCTTAACCAGCCAAAGTCCAAACCAGAAAACAGTCATCTTAACAACCACGCAGTCATTGAAGTCCCGTTCTTCACAGAAGAGTCCCTGCTATCTACTCTCAAGACTTGCAGAGATGAGGGGAGCTTCAAGAAGCTTGTTCATAGTATAGGTCAGGTATTCTCAAGTTCGGAGTCCCTTAATCAGAGCTTCCTACTCCCTACCCCTGCAAAGAGTTGTGGAATCCAAGTCTATGTTGATATCGAAGCTGTTAGGCGGTGCTACAAGGCACTCTTTGAAATAGGGGACGGCTCAATAGAGAATGCACTTCTTAATGCCTTGGTCAACCTTTCCCCTGAACTTGAGGTAGAAGTGAGATATAAGAACCCTTCTGCTAACCCACACTACATCAACCAATTCTTGATCATTATGGAAAATACAATGCTGCACAGTCCTGAATACCTGGAATCTGGACTTCCGAGCTTTTTGAAAGCCATGAGTCATCTGCCTGTGCCTGCTCAAGGACAGTTGGTGAAGATATGGTCCTGGTACCCTGTGGATCACATTAGACGCATGCTTGAGAGCCTTCAACAGCTCATCACATACCAGGTATTGACAGGACCAGCTGCAGTAGGGACTGCGCCGGTACATGAAGATGATGCTATTGTCAGTGCTACAAAGGTTATGAAGCTGATATACTTTGCTAGCATAATGGGTGGAGAGAGGCGTAATACGGTCACCATGGAGCAGGAAGCTGCAGTGGTGACACCAAGCGGAGCTTTCTTGGAAGACCCTTTGATGAAGGAACTTCAGCTCTTATCAATGGACTGCCGCCAGCCTTTGATTGATTATGAAGAATTTGTTAATGAACCACTGAATGACCAAATTGAAGTTGATAGGGATTTTACTCATTTCAAAAGTGAACAGCAAGGAAGGTTTTCCTTTCTAAGTCATAACTTTTTACTGAGTACAGCTACAAAGAGCTTAGGTCTGTTTTTTGACAACCGGGTTCGTATGTACAGTGAGCGTCGGCTAACACTTCTTTATAGCTTAGTGAGAAGGCAACAACCAACTCCTTATCTGCGCCTAAAAGTCAGAAGGGACCACCTTATAGAAGACGCCCTTGTCAGTCTAGAAATGGTTGCGCAGGATAATCCACTGGACCTGAAAAAACAGCTGTTTGTTGAGTTTGAAGGGGAGCAGGGTATTGACGAAGGGGGTGTGTCCAAAGAGTTTTTCCAGCTCATTGTTGAACAGATATTCAATCCAGACTATGGCATGTTTACTTATGATGAAGCAACAAGAATATGCTGGTTCAACCCAACATCATTTGAGAGTGATGCTCAATTCTGTCTGATTGGCCTGGTTCTGGGCCTTGCCATCTATAATAATATCATTCTGGATATCCACTTTCCTATGGTGGTCTATAGGAAGCTGTTTGGAAAGCCAGGCACTGTAGAAGACCTAAAGGATTCACATCCAGTTCTGTACATGAGTTTAACAGAGCTGTTGACTTATGAGGGCAATGTGGAGGAAGACCTTATGTGTACCTTCAAGATTGGCTACACTGATGTGTTTGGATCTGATCTGACCCATGAGCTTAAGGCGAATGGAGAGAGCATACCCGTCACCAAGGAGAACAGACAGTTCACTGCATTCAAGCGTGGGTTTGATATGGTGGTAGATGAGTCCCCCCTGAAGATATTTTTCCGTCCTGATGAGGTTGAGATGCTTGTCTGTGGTAGCAAGgattttgattttgatgCGCTAGAGAAGGCAACTGAGTATGATGGTGGACTAACAAAGGACTCTGCCCTTATAAGGTGGTTCTGGGAGATTGTACACAGCTTTGATATGGAGCAGAAGAGGCAGCTGTTGATGTTTACCACTGGCAGCGACCGCATCCCTGTTGGTGGGCTCGCCAAACTCAAGCTGATCATCGCCAAAAACGGGCCAGACTCTCCTAGATTGCCTACCGCCCATACATGTTTTAATGTGCTGCTGCTCCCGGACTATGCCACCAAAGAGAAGCTTGAGGAACGTCTTTTAAAAGCCATCACACACGCAAAAGGATTTGGCCTGCTTTGATACTAGTCTCTGACCGTTTGGCGAAGTGTAGGGTGTTAAAACTAAAGCTTGCTTATGGATTGATCATGAGTTCATCGTGATGTTCAATCCTTGGAATGAGAATGTGGGAATTGCtaggaagaggggggggggggggcgttgtTGCTTTTTCTGTCATGGACTGATCATAGCTTCTGGGTGCCTTAAGGCCAAGCTTGCCTTGGGTCTACTGGATGTTCTCAGGTTAAAGTACTGTAAGATGTTTGGTAATTTGTaagtttttttgtattattggCTTGATTAGACATGTAGAATGTTATGCAGTCATTCAACGtcatttcttgtttttgtgaGCTGATATTCTTTCAGTGAGATAAACTTTGAAGGTGGTATTCCAGCCACCCTTGCAGATTAATTGAGCTACTGTACTTTATGTCAAGGCAAATGTTTTTCAGGATTTCGCGGTATCAAAAGTACACTGGTACAGTACCAGAAAGATTGGAACATGTTTCTAGACAATGATATCGACTCCCTAGTCAAGGATGGGTGAAACACACTAAGGATTGGGGCTGATCGCTGAGCAGTTCGACCGTGGCCCACATCAGATCCAGGCACTATTCCATTAAGCGATCTGTAGTGTTTAATTAATGGCAAAATTATTGGGTAGTTCCAGAGGACTGGTTATTCATCTTATTtctcttaaaacaaaatgttccCGACTCCTTGCTCGATAGAATTCCTGACGTATTTTGTTGCCTTCACCTAAATGTCTTTAAAAACTTGAGCAGGGTATTGGGGGCAAACGTGGCATTATCATCTAATTGACGCAAAACTTGAAAAAGTCCAAACATTGACAACAAATAAGAAAACCCACAGTAATGCCGAGTGAACCCTCCTGTGTCGTTTGCACACTATTGTAtgtacatacacctatttcaataaaggttgtcagtgcaaatggcaaatggcgattggcaaatggcagttgaacgaccgaaagtaaccatgcgtctcgaagaatatggataaatcaaaacaattatccatttaAGGTTgccaatgcttggctctgacattacTGGACTTTATTtgacacctttaattttacgaataattagtacccataaaccatttgccatttgcactaggtgcaaatggcgaatggcacctgaaataggtgtatgagGTTGCGTGGTTTTGGGAAAACTTTGCCAGCATAGATTCAAAAACGTTGTGAAATGTTGCTCTTTCTGCAAGGGTTACAAGTTTAAAGTTTTTCTCACGCCAGGAATGTTGCTTGTTGGTAAACAGTACAGagtgaaaataataaatgaaaaacagTTCGACCAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05086	Ubiquitin-protein ligase E3A OS=Homo sapiens OX=9606 GN=UBE3A PE=1 SV=4
O08759	Ubiquitin-protein ligase E3A OS=Mus musculus OX=10090 GN=Ube3a PE=1 SV=2
Q8CDU6	Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus OX=10090 GN=Hectd2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004925 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF16558 all species →	AZUL	Amino-terminal Zinc-binding domain of ubiquitin ligase E3A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042556 all species →	Homologous_superfamily	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamily	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR044611 all species →	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR032353 all species →	Domain	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45700 all species →	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10587	UBE3A, E6AP; ubiquitin-protein ligase E3 A	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032237408.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

47TPM > 0

16Conditions

32.3Max TPM

18.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	17.89	20.41
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	15.61	17.62
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	16.83	17.92
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	16.43	18.60
whole 6 week old aboral regenerate · regenerate uncut	3	3	15.44	16.31
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	19.30	26.50
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	19.98	23.16
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	20.76	26.30
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	21.03	22.00
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	21.85	22.70
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	19.47	20.72
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	21.97	28.18
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	17.24	18.70
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	21.20	22.00
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	13.38	21.23
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	22.58	32.33

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	20.41
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	17.72
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	15.55
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	17.62
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	15.91
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.29
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	17.92
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	16.55
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	16.03
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	18.60
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	15.88
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	14.82
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	16.31
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	15.90
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.09
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	26.50
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	16.15
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	15.27
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	23.16
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	19.05
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	17.73
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	26.30
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	18.94
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	17.05
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	22.00
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	21.74
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	19.35
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	22.70
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	21.69
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	21.16
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	20.72
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	20.29
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	17.40
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	28.18
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	21.02
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.73
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	18.70
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	17.40
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	15.61
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	22.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	21.59
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	20.01
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	21.23
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	18.90
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	32.33
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	19.94
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	15.46

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.