Detailed information of XP_032237485.2 in Nematostella vectensis

Genomic Location: NC_064043.1:1985657...2043465
NR annotation: XP_032237485.2, protein furry homolog isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5TBA9Protein furry homolog OS=Homo sapiens OX=9606 GN=FRY PE=1 SV=1
E9Q8I9Protein furry homolog OS=Mus musculus OX=10090 GN=Fry PE=1 SV=1
O94915Protein furry homolog-like OS=Homo sapiens OX=9606 GN=FRYL PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002627 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14225
all species →
MOR2-PAG1_CCell morphogenesis C-terminalFamilyInterproscan
PF14228
all species →
MOR2-PAG1_midCell morphogenesis central regionFamilyInterproscan
PF14222
all species →
MOR2-PAG1_NCell morphogenesis N-terminalFamilyInterproscan
PF19421
all species →
Fry_CFurry protein C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025481
all species →
DomainCell morphogenesis protein C-terminalInterproscan
IPR029473
all species →
DomainCell morphogenesis central regionInterproscan
IPR025614
all species →
DomainCell morphogenesis protein N-terminalInterproscan
IPR045842
all species →
DomainProtein furry, C-terminalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR039867
all species →
FamilyProtein furry/Tao3/Mor2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12295
all species →
FURRY-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000902
all species →
Biological Processcell morphogenesisInterproscan
GO:0005938
all species →
Cellular Componentcell cortexInterproscan
GO:0030427
all species →
Cellular Componentsite of polarized growthInterproscan
GO:0031175
all species →
Biological Processneuron projection developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_032237485.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032237485.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples
46TPM > 0
16Conditions
20.1Max TPM
10.8Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole 6 week old aboral regenerate · regenerate 96hpa 3 3 13.85 20.12
whole 6 week old aboral regenerate · regenerate 144hpa 3 3 9.49 13.30
whole 6 week old aboral regenerate · regenerate 0hpa 3 3 10.47 12.87
whole 6 week old aboral regenerate · regenerate 2hpa 3 3 10.60 12.89
whole 6 week old aboral regenerate · regenerate uncut 3 3 10.37 12.24
whole 6 week old aboral regenerate · regenerate 4hpa 3 3 13.33 13.63
whole 6 week old aboral regenerate · regenerate 120hpa 3 3 11.38 12.06
whole 6 week old aboral regenerate · regenerate 36hpa 3 3 10.93 12.42
whole 6 week old aboral regenerate · regenerate 24hpa 3 3 10.86 13.37
whole 6 week old aboral regenerate · regenerate 20hpa 3 3 12.24 13.72
whole 6 week old aboral regenerate · regenerate 16hpa 3 3 10.17 11.77
whole 6 week old aboral regenerate · regenerate 72hpa 3 3 12.47 15.92
whole 6 week old aboral regenerate · regenerate 60hpa 3 3 9.57 11.02
whole 6 week old aboral regenerate · regenerate 48hpa 3 2 8.40 14.11
whole 6 week old aboral regenerate · regenerate 8hpa 3 3 11.77 12.25
whole 6 week old aboral regenerate · regenerate 12hpa 3 2 6.41 11.32

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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