Detailed information of XP_032238077.2 in Nematostella vectensis

Genomic Location: NC_064036.1:5544636...5560619
NR annotation: XP_032238077.2, serine-rich adhesin for platelets isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54NA6Myb-like protein L OS=Dictyostelium discoideum OX=44689 GN=mybL PE=3 SV=1
Q8BP86snRNA-activating protein complex subunit 4 OS=Mus musculus OX=10090 GN=Snapc4 PE=1 SV=2
P91868snRNA-activating protein complex subunit 4 homolog OS=Caenorhabditis elegans OX=6239 GN=snpc-4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001352 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →
Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005
all species →
DomainSANT/Myb domainInterproscan
IPR017930
all species →
DomainMyb domainInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884
all species →
DomainSANT domainInterproscan
IPR051575
all species →
FamilyMyb-like DNA-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46621
all species →
SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001006
all species →
Molecular FunctionRNA polymerase III type 3 promoter sequence-specific DNA bindingInterproscan
GO:0019185
all species →
Cellular ComponentsnRNA-activating protein complexInterproscan
GO:0042795
all species →
Biological ProcesssnRNA transcription by RNA polymerase IIInterproscan
GO:0042796
all species →
Biological ProcesssnRNA transcription by RNA polymerase IIIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_032238077.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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