Gene detail

Detailed information of XP_032238460.2 in Nematostella vectensis

Genomic Location: NC_064037.1:3852386...3866627
NR annotation: XP_032238460.2, nucleolar protein dao-5 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5513107

ATGGCGCCTCTGTTGTTAAAGCACGTCGTTCGTTTCAGCTCCCAGGATAGCACGAGTGGAAAAGTCGAAAACCTGCTAAAATCTCAGACAGTTCCGTCAGCCGGTCGGTGGACGTGCTCGAAGGAGGGTTGTTGTGATCAATTGGAAGCCGAATTCCAGTTGGAGAGAGCCTCTCGTATCAGCCATGTTGATATCGGGAACTATGGGTCTGCATTTGTTGAAGTTCTAGTGGGTAACTCTATGTGGACTCCAAAAAAGGATTTTGTGTCTTTGATCCCCTCTGCCATGTTAATGACACCTGGTGATTGCAAACAATGGAATCAAACCAAGTCTGTTCGCATGTTCCACGGAGATTCCTTAAACCAGAAAACACTTTCCGAGTTATGGGACCGCATTCGAGTTATTTGCAGACAGCCGTTCAGAAAAGACAAACAATTTGGGCTGTCATTCATTCGCATCCTAGCCCCAGATTCTCAGGACAAATCTTCACCCTTGCTTCAAAGTGATAGCAATAAGCAGTTTGCAGAAAATGTCAGCAATTGTGTGAGACAAGATGAGGTTGAGGATACCTCCCCTGCCTTGAAGCATCTTCTGAGCCGACATTTCAAAAAGAGTCCTGATGGGCAAAATGCTCTCAACCGTGGAAGCAAAATGCTGCAAGCAGCTTTAGATAAACCCAGAACACCACAACCAAACAGTAATCCCAAGAGATCACTAGAAATGGTTGATTCTTATTATGGAGATCCAGACAATTTAAGATGTGATGATCTCTTTGGATGGAGAGGAATCAACCCATGGCTAGAAACAGGACCACTGCAAGGTGGAGACAAATCTTTAAAAGCAAATCAAGCCACATCAGAATTACCAGATAAGAAATGGAGCCTAAATGGAGATATTGAAGATGAAACTGAATGTTTCCTTGATGGGATTGACTTTTCCAAAGTGGACATGGAAACAGTTACCTACTCTGATCTACGATCACAGATGGAAGCTCAGAGAGAGTGTAGACTTACAAAGGCAGAGAAGAAAATATTTCTCAAGATGGCAAAAGACGTTGTTAGTAAAGTCATGGAAAAACTTGAGACCAAAGCCAATGACCGCGTGGAATCACCAAGTGAAAGCACAAGGTCCTCGAAAAAGGACCCAGATAAAGTGTCACCACTATCAAGGATAAAGTCACCAGCAACCTCTCGAGTCAGTCTTGATAGCGATAGTGACGATGGTAACGATTTGCCATCAGTCTTTACTAAGACAAAACCAGTATGGAAACCCCCAATAACAACACCACAAGTCAACAGCGACAGCGAGGAGGAAGACCTGCCTTCTTATTTATCGACAAATTCGCAGGATACGAAAATCAGAACACATAAGAGAATAGCTGATAACAACTCAAAAATTTCGTGCAGATCGAAAGTTGATTCCCAAAACTGTGGAACACCCAGTAAACGTACAAAGCAAACGAAAGATGAGACGTCTAGGCCTGACAGCGACTATGATTATGACACTATTGATGTCAGTTTGTCTCAAAGAGCACGCGCTACCAAACAGCCACAAACTTTAGCGTCAGATGATGATTTAAATGAAAGTCCTTTCACTCCGAAAAGGTATGGTACTAGCTATTCGTCCAATCAACGTATTCTACAAAGAAAGTCACCTCAAGAAAGTGACTCAGACGACGATCCGTCCGTCTTGTCAAATGAACCCTCGTCTAAAAGGGCATCGGTGTATGAAAGCACTTCATGCACCAGAACAGTCATATCTGATTCTGACGATGAAGTACCATCTAAGAATAATTTCTCTCAGTCCGCGAAGGCTCAGAGAAACGGGGAGCTATCTGACTCAGACAATGATTTGCCACCAGTTCTGTCTAGACAACCACCCACAGAACCATTAAAGAAGGAAAATGTAAAGATGTCCCGATTCAAAGAGCTTACTGCAAAAACTACAAAGTCCTCAATGGGAAAAGGCTCATCGTCTTTGAGTGCCTCATCAGCTTCGTCTAATCCAAGTTTACCATCTTCTTTGTACTATGAGCCTCCCCTGCAAAGAAATGCAAAAAGTGATGCCCCAATTGTTGGTTCAAGCTCAGCTAGTGAGTGCCATGTCGAGTGCCCAATTTGTGGTCAGCTATTTTTAGATTATTTGATTGAAGAGCATGCTTCCAGATACACTGACTTCGCCCCATGTTCTCCACCACATCAGTCTTCACCTGAAGAACTCGTTGATTGCCCGATCTGTATCAAGAGATTGCCCCGAAGTGCGATTGCTGAGCATGCAAACTTATGCGCTGAAAGGAGCCTAACCTCGAGTTCTCACGAGGATGGGGCAATAACATTAGTTTAA

Transcript

rna-XM_032382569.2

TCTCCAATGTTCTCTTAACCTCGAATTTCGCTAAAAAATTTCGTTTTCGAAATGGTGTagatttttcaacattttcgCGAGAATTTGAGGGTCTTCATACATGGGCTTCCTGTGACTCGAAGGCTCTGCCAcgcaccctcccctccccctgatgCTAGGTCTCCCGCCAAAATATAATGGCGCCTCTGTTGTTAAAGCACGTCGTTCGTTTCAGCTCCCAGGATAGCACGAGTGGAAAAGTCGAAAACCTGCTAAAATCTCAGACAGTTCCGTCAGCCGGTCGGTGGACGTGCTCGAAGGAGGGTTGTTGTGATCAATTGGAAGCCGAATTCCAGTTGGAGAGAGCCTCTCGTATCAGCCATGTTGATATCGggaaCTATGGGTCTGCATTTGTTGAAGTTCTAGTGGGTAACTCTATGTGGACTCCAAAAAAGGATTTTGTGTCTTTGATCCCCTCTGCCATGTTAATGACACCTGGTGATTGCAAACAATGGAATCAAACCAAGTCTGTTCGCATGTTCCACGGAGATTCCTTAAACCAGAAAACACTTTCCGAGTTATGGGACCGCATTCGAGTTATTTGCAGACAGCCGTTCAGAAAAGACAAACAATTTGGGCTGTCATTCATTCGCATCCTAGCCCCAGATTCTCAGGACAAATCTTCACCCTTGCTTCAAAGTGATAGCAATAAGCAGTTTGCAGAAAATGTCAGCAATTGTGTGAGACAAGATGAGGTTGAGGATACCTCCCCTGCCTTGAAGCATCTTCTGAgCCGACATTTCAAAAAGAGTCCTGATGGGCAAAATGCTCTCAACCGTGGAAGCAAAATGCTGCAAGCAGCTTTAGATAAACCCAGAACACCACAACCAAACAGTAATCCCAAGAGATCACTAGAAATGGTTGATTCTTATTATGGAGATCCAGACAATTTAAGATGTGATGATCTCTTTGGATGGAGAGGAATCAACCCATGGCTAGAAACAGGACCACTGCAAGGTGGAGACAAATCTTTAAAAGCAAATCAAGCCACATCAGAATTACCAGATAAGAAATGGAGCCTAAATGGAGATATTGAAGATGAAACTGAATGTTTCCTTGATGGGATTGACTTTTCCAAAGTGGACATGGAAACAGTTACCTACTCTGATCTACGATCACAGATGGAAGCTCAGAGAGAGTGTAGACTTACAAAGGCagagaagaaaatatttctCAAGATGGCAAAAGACGTTGTTAGTAAAGTCATGGAAAAACTTGAGACCAAAGCCAATGACCGCGTGGAATCACCAAGTGAAAGCACAAGGTCCTCGAAAAAGGACCCAGATAAAGTGTCACCACTATCAAGGATAAAGTCACCAGCAACCTCTCGAGTCAGTCTTGATAGCGATAGTGACGATGGTAACGATTTGCCATCAGTCTTTACTAAGACAAAACCAGTATGGAAACCCCCAATAACAACACCACAAGTCAACAGCGACAGCGAGGAGGAAGACCTGCCTTCTTATTTATCGACAAATTCGCAGGATACGAAAATCAGAACACATAAGAGAATAGCTGATAACAACTCAAAAATTTCGTGCAGATCGAAAGTTGATTCCCAAAACTGTGGAACACCCAGTAAACGTACAAAGCAAACGAAAGATGAGACGTCTAGGCCTGACAGCGACTATGATTATGACACTATTGATGTCAGTTTGTCTCAAAGAGCACGCGCTACCAAACAGCCACAAACTTTAGCGTCAGATGATGATTTAAATGAAAGTCCTTTCACTCCGAAAAGGTATGGTACTAGCTATTCGTCCAATCAACGTATTCTACAAAGAAAGTCACCTCAAGAAAGTGACTCAGACGACGATCCGTCCGTCTTGTCAAATGAACCCTCGTCTAAAAGGGCATCGGTGTATGAAAGCACTTCATGCACCAGAACAGTCATATCTGATTCTGACGATGAAGTACCATCTAAGAATAATTTCTCTCAGTCCGCGAAGGCTCAGAGAAACGGGGAGCTATCTGACTCAGACAATGATTTGCCACCAGTTCTGTCTAGACAACCACCCACAGAACCATTAAAGAAGGAAAATGTAAAGATGTCCCGATTCAAAGAGCTTACTGCAAAAACTACAAAGTCCTCAATGGGAAAAGGCTCATCGTCTTTGAGTGCCTCATCAGCTTCGTCTAATCCAAGTTTACCATCTTCTTTGTACTATGAGCCTCCCCTGCAAAGAAATGCAAAAAGTGATGCCCCAATTGTTGGTTCAAGCTCAGCTAGTGAGTGCCATGTCGAGTGCCCAATTTGTGgtcagctatttttagattattTGATTGAAGAGCATGCTTCCAGATACACTGACTTCGCCCCATGTTCTCCACCACATCAGTCTTCACCTGAAGAACTCGTTGATTGCCCGATCTGTATCAAGAGATTGCCCCGAAGTGCGATTGCTGAGCATGCAAACTTATGCGCTGAAAGGAGCCTAACCTCGAGTTCTCACGAGGATGGGGCAATAACATTAGTTTAAAGGGAAGCTAAGGATTCCACTTGAAACGACCATTAGAATTCCTCGGAGATAGTGTAGAATTTTTAAAATTGGGATGTGATATAAACAGTTGCAGCCATTATAAACTTGGGAAAGGGTCTCAGTCAATGTAGCTACATACGTTATTATAAGTTCATTTAGTAGCGCATGTATTTTTAAAGGTTCCCTCGTGTCGTATGTCGGTGTTTCTTTCATGTATCTATCGGATGACCAAGAGAACAAAGACTGATTTGGAATTCTCCAGGCTAgctcttttttctcttattattGCGGGTTATTAAGAGAGCCGTGACTCATGGAAATTTCACCATTTTAACTCCACCTGTATTAGCGTAGATTAAAGCGGCGTTattcaccagtttacttccgatGGGCCGACAGAAAACTCAACccacaagaaacaaaagaatctattaaaatccgcgctatttaacaggccatttgctctaaattatcagtcaaatcctcaaagaaacttctaaTTTTTCGTTTTCgcttccgttaaaaatcatcggaggtGAACAAGTGACATATGGCCGCTTTCACTTGTTTTAATTTAGTTTAACTTGTTGCTTGGGCTTTTTAACTGTGTCCCTCTATTAGCGTAGATtaacatttttaatttttttttcaaagttcgtattaatatttttaaagttcgtgtattttaaaaatatcttatATCTGATTTGAAAAACGATAAGCTAAATTCGGAGTACGGCCTGAGTTTCAGTAAGCAATTGAAGGTTTTAAAACACTCACTATCAAAAGTTGTGTGAATAAGACGCGACTTGGCTTTCGAAATTTTGTGCATGGATGATTTGGATTATTAGATTCTGATAAAAATTGTGTTGGCTGAGCTTTGGTGTCAGGTTCACTAAACTTAGTGGGCGCTTCCTGTTAGCAGTAGCTTAACCCACCGTCTTTTAGATGGAGTCATGTATTTCTTATGTATTTCCgtgtatttttctattttgtctGTTTTTGACACCTAACCAAGCGATGCCAGTTATCAAGCTTATAATTAACGAATGAAGGGATTTACCACCGTTCCGGCTCTGAGCTTTAACAACTCTATTTCTTTTTATGACTGGAAATGAATTGAGGCTTCTTAATTGTATActtatatttcaatatattctAAAAGGCAAACTGCTTTCGTCTGTAATtatgttttaattaaaagagAAAATAGACCTGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P18887	DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
Q9ESZ0	DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2
Q60596	DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001841 (this species only)
Ubiquitin family	UBD\|ZnF\|UBZ · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01834 all species →	XRCC1_N	XRCC1 N terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR002706 all species →	Domain	DNA-repair protein Xrcc1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11370 all species →	DNA-REPAIR PROTEIN XRCC1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0000012 all species →	Biological Process	single strand break repair	Interproscan
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032238460.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032238460.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

11.3Max TPM

5.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	6.04	7.36
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	5.23	7.36
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	2.31	2.41
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	4.76	6.02
whole 6 week old aboral regenerate · regenerate uncut	3	3	3.95	4.70
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	4.81	9.17
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	4.43	7.50
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	7.47	9.18
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	4.51	7.21
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	6.78	7.85
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	6.00	6.43
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	8.50	11.34
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	6.71	7.01
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	5.93	9.28
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	7.98	9.75
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.66	4.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.36
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.13
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.63
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.36
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.24
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.11
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.41
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.32
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.20
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.02
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.29
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	2.97
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.70
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.13
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	3.02
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	9.17
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	5.26
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.50
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.78
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.18
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.21
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.02
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	7.21
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.32
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	7.85
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.39
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.10
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.43
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.18
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	5.40
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	11.34
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.41
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.76
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.01
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.63
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.50
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	9.28
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.52
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.75
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.99
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	6.21
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	4.97
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.