Genomic Location: NC_064037.1:10624359...10632811
NR annotation: XP_032239149.1, SMC5-SMC6 complex localization factor protein 1 isoform X1 [Nematostella vectensis]
| CDS |
| LOC5513685 |
| Transcript |
| rna-XM_032383258.2 |
| Protein |
| XP_032239149.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | Family | Interproscan |
| PF00023 | Ank | Ankyrin repeat | Repeat | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR001357 | Domain | BRCT domain | Interproscan |
| IPR049936 | Domain | DNA topoisomerase 2-binding protein 1, eighth BRCT domain | Interproscan |
| IPR042479 | Family | SMC5-SMC6 complex localization factor protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46677 | SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006974 | Biological Process | DNA damage response | Interproscan |
| GO:0035861 | Cellular Component | site of double-strand break | Interproscan |
| GO:1990166 | Biological Process | protein localization to site of double-strand break | Interproscan |
| GO:2000781 | Biological Process | positive regulation of double-strand break repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26126 | SLF1; SMC5-SMC6 complex localization factor protein 1 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
