Detailed information of XP_032239404.2 in Nematostella vectensis

Genomic Location: NC_064038.1:13886963...13903169
NR annotation: XP_032239404.2, zinc finger RNA-binding protein isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5U231Zinc finger RNA-binding protein OS=Xenopus tropicalis OX=8364 GN=zfr PE=2 SV=1
Q5REX3Zinc finger RNA-binding protein OS=Pongo abelii OX=9601 GN=ZFR PE=2 SV=1
Q96KR1Zinc finger RNA-binding protein OS=Homo sapiens OX=9606 GN=ZFR PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07528DZF_NDZF N-terminal domainDomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF20965DZF_CDZF C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006561DomainDZF domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR049401DomainDZF domain, N-terminalInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR049402DomainDZF domain, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45762ZINC FINGER RNA-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13203ZFR; zinc finger RNA-binding protein-Spliceosomeko03041deepkoala

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