Detailed information of XP_032239448.2 in Nematostella vectensis

Genomic Location: NC_064037.1:16265786...16278815
NR annotation: XP_032239448.2, M-phase phosphoprotein 9-like [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6H5Y1M-phase phosphoprotein 9 OS=Mus musculus OX=10090 GN=Mphosph9 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008921 (this species only)

 Pfam domain
No Pfam domain signature was detected for XP_032239448.2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026636
all species →
FamilyM-phase phosphoprotein 9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14926
all species →
M-PHASE PHOSPHOPROTEIN 9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005814
all species →
Cellular ComponentcentrioleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_032239448.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032239448.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples
39TPM > 0
16Conditions
8.7Max TPM
3.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole 6 week old aboral regenerate · regenerate 96hpa 3 3 4.91 5.51
whole 6 week old aboral regenerate · regenerate 144hpa 3 3 3.33 4.22
whole 6 week old aboral regenerate · regenerate 0hpa 3 3 2.54 3.07
whole 6 week old aboral regenerate · regenerate 2hpa 3 3 2.71 2.99
whole 6 week old aboral regenerate · regenerate uncut 3 3 2.38 2.58
whole 6 week old aboral regenerate · regenerate 4hpa 3 2 2.41 4.09
whole 6 week old aboral regenerate · regenerate 120hpa 3 2 2.72 4.49
whole 6 week old aboral regenerate · regenerate 36hpa 3 3 3.09 4.01
whole 6 week old aboral regenerate · regenerate 24hpa 3 2 1.83 3.00
whole 6 week old aboral regenerate · regenerate 20hpa 3 2 1.91 2.88
whole 6 week old aboral regenerate · regenerate 16hpa 3 3 2.82 3.20
whole 6 week old aboral regenerate · regenerate 72hpa 3 3 6.12 8.71
whole 6 week old aboral regenerate · regenerate 60hpa 3 3 5.31 7.05
whole 6 week old aboral regenerate · regenerate 48hpa 3 1 1.83 5.48
whole 6 week old aboral regenerate · regenerate 8hpa 3 2 2.55 4.00
whole 6 week old aboral regenerate · regenerate 12hpa 3 1 1.03 3.08

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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