Genomic Location: NC_064034.1:17750274...17770528
NR annotation: XP_032239897.2, microtubule-associated serine/threonine-protein kinase 3 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families
| CDS |
| LOC5514393 |
| Transcript |
| rna-XM_032384006.2 |
| Protein |
| XP_032239897.2 |
| UniProt accession | Description |
|---|---|
| Q6P0Q8 | Microtubule-associated serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=MAST2 PE=1 SV=2 |
| Q60592 | Microtubule-associated serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Mast2 PE=1 SV=1 |
| Q9Y2H9 | Microtubule-associated serine/threonine-protein kinase 1 OS=Homo sapiens OX=9606 GN=MAST1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002586 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00595 all species → | PDZ | PDZ domain | Domain | Interproscan |
| PF08926 all species → | DUF1908 | Domain of unknown function (DUF1908) | Domain | Interproscan |
| PF00069 all species → | Pkinase | Protein kinase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023142 all species → | Homologous_superfamily | Microtubule-associated serine/threonine-protein kinase, pre-PK domain superfamily | Interproscan |
| IPR036034 all species → | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR011009 all species → | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR000961 all species → | Domain | AGC-kinase, C-terminal | Interproscan |
| IPR001478 all species → | Domain | PDZ domain | Interproscan |
| IPR000719 all species → | Domain | Protein kinase domain | Interproscan |
| IPR050236 all species → | Family | Serine/threonine-protein kinases, AGC | Interproscan |
| IPR015022 all species → | Domain | Microtubule-associated serine/threonine-protein kinase, pre-PK domain | Interproscan |
| IPR008271 all species → | Active_site | Serine/threonine-protein kinase, active site | Interproscan |
| IPR037711 all species → | Domain | Microtubule-associated serine/threonine-protein kinase, catalytic domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24356 all species → | SERINE/THREONINE-PROTEIN KINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004674 all species → | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006468 all species → | Biological Process | protein phosphorylation | Interproscan |
| GO:0004672 all species → | Molecular Function | protein kinase activity | Interproscan |
| GO:0018105 all species → | Biological Process | peptidyl-serine phosphorylation | Interproscan |
| GO:0035556 all species → | Biological Process | intracellular signal transduction | Interproscan |
| GO:0000287 all species → | Molecular Function | magnesium ion binding | Interproscan |
XP_032239897.2.Transcript abundance of XP_032239897.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole 6 week old aboral regenerate · regenerate 96hpa | 3 | 3 | 20.36 | 24.78 | |
| whole 6 week old aboral regenerate · regenerate 144hpa | 3 | 3 | 14.77 | 20.18 | |
| whole 6 week old aboral regenerate · regenerate 0hpa | 3 | 3 | 18.88 | 19.70 | |
| whole 6 week old aboral regenerate · regenerate 2hpa | 3 | 3 | 14.65 | 17.80 | |
| whole 6 week old aboral regenerate · regenerate uncut | 3 | 3 | 14.75 | 16.01 | |
| whole 6 week old aboral regenerate · regenerate 4hpa | 3 | 3 | 16.24 | 17.89 | |
| whole 6 week old aboral regenerate · regenerate 120hpa | 3 | 3 | 20.22 | 22.25 | |
| whole 6 week old aboral regenerate · regenerate 36hpa | 3 | 3 | 17.99 | 19.91 | |
| whole 6 week old aboral regenerate · regenerate 24hpa | 3 | 3 | 18.36 | 22.33 | |
| whole 6 week old aboral regenerate · regenerate 20hpa | 3 | 3 | 18.06 | 19.39 | |
| whole 6 week old aboral regenerate · regenerate 16hpa | 3 | 3 | 16.01 | 17.69 | |
| whole 6 week old aboral regenerate · regenerate 72hpa | 3 | 3 | 18.06 | 19.33 | |
| whole 6 week old aboral regenerate · regenerate 60hpa | 3 | 3 | 16.25 | 16.62 | |
| whole 6 week old aboral regenerate · regenerate 48hpa | 3 | 2 | 12.74 | 21.46 | |
| whole 6 week old aboral regenerate · regenerate 8hpa | 3 | 3 | 19.67 | 21.20 | |
| whole 6 week old aboral regenerate · regenerate 12hpa | 3 | 2 | 9.66 | 17.78 |
Source: CnidoSite RNA-seq expression matrices (NVECT_TPM,
StringTie quantification over 48 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.