Gene detail

Detailed information of XP_032240063.2 in Nematostella vectensis

Genomic Location: NC_064039.1:3435538...3464891
NR annotation: XP_032240063.2, zinc finger protein 420 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5514682

ATGGCTAGGACTAAAACAACACCAGTCAAATCTGCTCAAAAACAAAAAAAGGAACGAGCTTCTTCGCGGAAACGCGAGAAGTCATCGGTCGCTGGAACGGCGGATCTACAAAGTCCTGCGAGCAAAGCGTCATCTCGGGTTAGCTCAAGCTCTTCGCGAAGACGTTCTACGAGGAAGAATACTTCTCATGGAAAAGGCAAAAAACTAGTTAACAACAATGACAATCTGCCACCGGAGCTGCGTCAGGCTGGGCTCATCGCACACCAAGGCATGTCCCAAGGCAAATGCTTTGGCCCTTTTAGAGGAGAAATAATAAAGAAGAAACGCCCTCCATCTGAGATGCATTCCTTGATATGCGATGTTGGGAGCGTTGATGGCTGTACCTATCATTTCTATGCTCACAAAGATCACCAAGACCAATGCAAATGGCTGCAGCAAATGCAGACAGCACCAAATCCAGAACAGCAGAACATTGTCGCTCATAACTCAGCTGCAGGTGTCAGTTATGAGGTTGCAAGGGATATCAAACAAGGGGAGGAGCTTCTTGTTCTCTTTAATGACAGCTATGGAGGAAAAAAGTACCCAGCTTACATTGAAAATATGCCAGTCCAGTTTGTGCCACAACCTGAGCTACTAACAGTAGTCCCTCTTGAGTATAAGAAGCAGCTTGGTGTTACCACAAGTGACAAGTCCCCAATGCAGGAAGCCAGTGGTGAGACATTGAGTGATGGCACATGTGGTGAGGAAGACACTACTGCTGATGATGATGATGCTGGTGATGACAATGGTTATATTGATTCTGATGGTGATGAGAACGATGAGTATGACGAAGGTTGCGAAGGTGATGATGATGTTCAAGAAGATGATGATGTTGAGGAGGGTGATGATGCTGATGCTTCTGAATCTGATGGTGAAGAAGATACTGATCAGGCTGAGGAACCAGAATGGACAAACAAATCATCAAAAGCCACAGGGAAGAAAAAAACAAATACTTCCAAAAAGACGATTAAAAATGCAAAAGAGCCCAAGAAGAGGCGCAATGCTTTGACAGTGTTGGAAATCAAGTCAACAAATGAAATGACTAAAACAGAGAGCGTGGTATTCAAGTGCAGTTACTGTGCGATCGAGAGTAGCGATAAGGAGGTTGCCGAAAAACACGTGAGCTCCGGGGACTGCTTGTCTCTAGAGTTCAGTTGCCCCACGTGTGGGCGCACTTTCCAAAGCAAACACACGCAGGTGAAGCACGTGTGTGCTGGAAAACCAAAGTGTTCTGTTTGTGATAAAGAGTTCCATGACTGGAATGCCCTTATGACACATATTCGTAATCAGAAAAACAACCCCGAGCACAAGAACAGTTGCAAGGAGTGTAATGTCGAATTTGCCGACAAGCGAGAAAAGCGTCGTCACGTGCGTGTGTCTCACCCACCCCCCCAGGGGGAGCTGAAGTGTCATATATGCGAAAAGGTGTACAGTAACAAGCACTACTTGCGTGACCACATCAAGACGCACAACCCAGACGGATTCAAGTGTCCGGAGTGCGGGAAAAACTTCTCGTCTGGTAGCAACTTGCGCAAACACGTGCGAAAACATAAGCCGGGATACAAGCCGTACAAAGACAAACGCGTGCATTTGCCGAGAGAGAGAAAACACGAATGCATGGAATGTCAGAAGCTCTTTGACTCCCCGAATGCACTAGAAGTTCATTTCCGTACCCATACCGGAGAGCGGCCATACCTGTGCGAGAAATGCGAGTGGAAATTCTCTCAAAAGGGTCATCTAGAGCGTCATATGCGGACAGTGCACCGTCCGCTCACCTCAGAAGAGGGATCTGAAAGCCAGAGGCGCATTCCCCCTGCTGAACAGCCTCAGACATGTGACATCTGCAAGAAGGTGTATGCGAGCGCACGAGTGCTCAAGGTACACGTACAGACCGTGCACGAAGGGGAGCGACCACACAAGTGCAAGTACTGCGAAGCCACGTTCACACAGAGAGGTCACCTGTGGCGTCACAAGCACACCGTGCACCCGGACTGCGAGGAGGTGCAGCAGAAGATCATGTCTGGGGAGCACGTGTGCAGTGTGGAGGGGTGTGGTCTTAGGTTCCCTTGCGGCTCAGACCTCACCGTCCATATGTCCTCCAAACACAACACTACCTGGCCCTTCGCTTGTGAACAGTGTGGCGTAACGTTCGCAAACAGAAGCAACCTAAGTAAGCACATTCGGCGGCGTCACTCTGACCCGAACGTTGACCAGAACACGTGCGGGACGTGCTACCAGACGTTCGAGAACACCCTGGAGCTTATGCAGCATAGAAGGTCACATACAGGAGATAAAGGCTTTCAATGCGAGCTGTGTGGACAAGGCTTTGTGCAGAGATCAGGGCTCAACAAACATCTCAGGTGTCGAAGATGTCCAAACATCGAAGGCTCTGCTGTGAAGATAGCACTAAGGAAGTACGAGTGTAACGTCTGCAATCGCATGTTCCCCGGCCCGTCCGACCTGAAGGCCCACCGCCGGACACACACTGGCGAGAAACCGTTTGAGTGTCCAGTATGTCATAAAGCCTTTAGTCAAACAGGGAACCTTAGCAAACATGTCAGGTACGTCCACGAGAAGCAGCAACGACCAAAAGAGAAACCACGAGACAAGAAGTACTTCTGTAGTTTGTGCGGCAAGGCGTTTCTGTGCCCAAGCAGTCTGTCAATGCACTGTAGGACCCACTCCGGCGACAAGCCATACGCATGTGAACAGTGCGACGCCTGCTTCGCGCAGGCGGGAAACCTGAAGAAGCACCTAAACAGGTGGCACAACCCTGACAACCCCGTGAAACGAGGGACGCGCAAGCGAGGGCGTAAACGGAACAGCGTGGACAAACAGGAAAGCGGTAAACTTCAAAAGGAGACTGGGTTTAACCTAGAAACCGCTGACCAAAGCCAGGGGGCGGCTCTCGCTAGCGAGGACGACGAGAGCTACAGTGGCGACGAGAATCAGACCAAGACCAATGAAAGCAGAGAACAACATGGAGACCCGGATGTCGCAGTCACGAGCTCTCTCCAGCCATACACAGGGAATCCACGAGCCTGCACTCCGTTGAATAGTGTGAATCAAGGTCACGTGACCCCACTAAACACAGCACTAGCCTCGATTGCATGTAGCACCACATTCCAAAGGAACCCCATCATCATGAGCCACTTTGTCAACACGACTACTGTCCCACTTACTCAGGCGGTTCCCTCGGTCCATGTTACTCAAGGTGTCCTGCAGCCCCAGCAGGTGGAGGTGTCGTGCCCCCCAGGGACGGTCCCTAGCAGCTCCGTGGTCCTCCCACACATGCACACGATATTTTCTCAGCAGATGTCAAACGCGCCGTTCGTGCCCCCTGCCATCTTAATGGGACAGGGGACCCAGCCAGACATGACGATATTCCCTTTCTCGCCCTCTGCGCTATTCCAGCAATGA

Transcript

rna-XM_032384172.2

TGACTCGAGTGAAACAGGAGACTCTTCGGAACGGACGTCGGCTGAAAAGCGGAGTGTGCGAACATGAGCTAACAAATGTCCGATCAAAAGTGTTTTATGTGgtctttttcttgcttttAACTATAGAGAGAAAGGCTGATGGCTAAATAATGGCTAGGACTAAAACAACACCAGTCAAATCTgctcaaaaacaaaaaaaggaacGAGCTTCTTCGCGGAAACGCGAGAAGTCATCGGTCGCTGGAACGGCGGATCTACAAAGTCCTGCGAGCAAAGCGTCATCTCGGGTTAGCTCAAGCTCTTCGCGAAGACGTTCTACGAGGAAGAATACTTCTCATGGAAAAGGCAAAAAACTAGTTAACAACAATGACAATCTGCCACCGGAGCTGCGTCAGGCTGGGCTCATCGCACACCAAGGCATGTCCCAAGGCAAATGCTTTGGCCCTTTTAGAGGAGAAATAATAAAGAAGAAACGCCCTCCATCTGAGATGCATTCCTTGATATGCGATGTTGGGAGCGTTGATGGCTGTACCTATCATTTCTATGCTCACAAAGATCACCAAGACCAATGCAAATGGCTGCAGCAAATGCAGACAGCACCAAATCCAGAACAGCAGAACATTGTCGCTCATAACTCAGCTGCAGGTGTCAGTTATGAGGTTGCAAGGGATATCAAACAAGGGGAGGAGCTTCTTGTTCTCTTTAATGACAGCTATGGAGgaAAAAAGTACCCAGCTTACATTGAAAATATGCCAGTCCAGTTTGTGCCACAACCTGAGCTACTAACAGTAGTCCCTCTTGAGTATAAGAAGCAGCTTGGTGTTACCACAAGTGACAAGTCCCCAATGCAGGAAGCCAGTGGTGAGACATTGAGTGATGGCACATGTGGTGAGGAAGACACtactgctgatgatgatgatgctggtgatgacaatggttATATTGATTCTGATGGTGATGAGAACGATGAGTATGACGAAGGTTGcgaaggtgatgatgatgttcaagaagatgatgatgttgaggagggtgatgatgctgatgcttCTGAATCTGATGGTGAAGAAGATACTGATCAGGCTGAGGAACCAGAATGGACAAACAAATCATCAAAAGCCAcagggaagaaaaaaacaaatacttcCAAAAAGACGATTAAAAATGCAAAAGAGCCCAAGAAGAGGCGCAATGCTTTGACAGTGTTGGAAATCAAGTCAACAAATGAAATGACTAAAACAGAGAGCGTGGTATTCAAGTGCAGTTACTGTGCGATCGAGAGTAGCGATAAGGAGGTTGCCGAAAAACACGTGAGCTCCGGGGACTGCTTGTCTCTAGAGTTCAGTTGCCCCACGTGTGGGCGCACTTTCCAAAGCAAACACACGCAGGTGAAGCACGTGTGTGCTGGAAAACCAAAGTGTTCTGTTTGTGATAAAGAGTTCCATGACTGGAATGCCCTTATGACACATATTCGTAATCAGAAAAACAACCCCGAGCACAAGAACAGTTGCAAGGAGTGTAATGTCGAATTTGCCGACAAGCGAGAAAAGCGTCGTCACGTGCGTGTGTCTCACCCACCCCCCCAGGGGGAGCTGAAGTGTCATATATGCGAAAAGGTGTACAGTAACAAGCACTACTTGCGTGACCACATCAAGACGCACAACCCAGACGGATTCAAGTGTCCGGAGTGCGGGAAAAACTTCTCGTCTGGTAGCAACTTGCGCAAACACGTGCGAAAACATAAGCCGGGATACAAGCCGTACAAAGACAAACGCGTGCATTTGCCGAGAGAGAGAAAACACGAATGCATGGAATGTCAGAAGCTCTTTGACTCCCCGAATGCACTAGAAGTTCATTTCCGTACCCATACCGGAGAGCGGCCATACCTGTGCGAGAAATGCGAGTGGAAATTCTCTCAAAAGGGTCATCTAGAGCGTCATATGCGGACAGTGCACCGTCCGCTCACCTCAGAAGAGGGATCTGAAAGCCAGAGGCGCATTCCCCCTGCTGAACAGCCTCAGACATGTGACATCTGCAAGAAGGTGTATGCGAGCGCACGAGTGCTCAAGGTACACGTACAGACCGTGCACGAAGGGGAGCGACCACACAAGTGCAAGTACTGCGAAGCCACGTTCACACAGAGAGGTCACCTGTGGCGTCACAAGCACACCGTGCACCCGGACTGCGAGGAGGTGCAGCAGAAGATCATGTCTGGGGAGCACGTGTGCAGTGTGGAGGGGTGTGGTCTTAGGTTCCCTTGCGGCTCAGACCTCACCGTCCATATGTCCTCCAAACACAACACTACCTGGCCCTTCGCTTGTGAACAGTGTGGCGTAACGTTCGCAAACAGAAGCAACCTAAGTAAGCACATTCGGCGGCGTCACTCTGACCCGAACGTTGACCAGAACACGTGCGGGACGTGCTACCAGACGTTCGAGAACACCCTGGAGCTTATGCAGCATAGAAGGTCACATACAGGAGATAAAGGCTTTCAATGCGAGCTGTGTGGACAAGGCTTTGTGCAGAGATCAGGGCTCAACAAACATCTCAGGTGTCGAAGATGTCCAAACATCGAAGGCTCTGCTGTGAAGATAGCACTAAGGAAGTACGAGTGTAACGTCTGCAATCGCATGTTCCCCGGCCCGTCCGACCTGAAGGCCCACCGCCGGACACACACTGGCGAGAAACCGTTTGAGTGTCCAGTATGTCATAAAGCCTTTAGTCAAACAGGGAACCTTAGCAAACATGTCAGGTACGTCCACGAGAAGCAGCAACGACCAAAAGAGAAACCACGAGACAAGAAGTACTTCTGTAGTTTGTGCGGCAAGGCGTTTCTGTGCCCAAGCAGTCTGTCAATGCACTGTAGGACCCACTCCGGCGACAAGCCATACGCATGTGAACAGTGCGACGCCTGCTTCGCGCAGGCGGGAAACCTGAAGAAGCACCTAAACAGGTGGCACAACCCTGACAACCCCGTGAAACGAGGGACGCGCAAGCGAGGGCGTAAACGGAACAGCGTGGACAAACAGGAAAGCGGTAAACTTCAAAAGGAGACTGGGTTTAACCTAGAAACCGCTGACCAAAGCCAGGGGGCGGCTCTCGCTAGCGAGGACGACGAGAGCTACAGTGGCGACGAGAATCAGACCAAGACCAATGAAAGCAGAGAACAACATGGAGACCCGGATGTCGCAGTCACGAGCTCTCTCCAGCCATACACAGGGAATCCACGAGCCTGCACTCCGTTGAATAGTGTGAATCAAGGTCACGTGACCCCACTAAACACAGCACTAGCCTCGATTGCATGTAGCACCACATTCCAAAGGAACCCCATCATCATGAGCCACTTTGTCAACACGACTACTGTCCCACTTACTCAGGCGGTTCCCTCGGTCCATGTTACTCAAGGTGTCCTGCAGCCCCAGCAGGTGGAGGTGTCGTGCCCCCCAGGGACGGTCCCTAGCAGCTCCGTGGTCCTCCCACACATGCACACGATATTTTCTCAGCAGATGTCAAACGCGCCGTTCGTGCCCCCTGCCATCTTAATGGGACAGGGGACCCAGCCAGACATGACGATATTCCCTTTCTCGCCCTCTGCGCTATTCCAGCAATGAAACATTATTGGTACATTACGAAAGCATCCCATGACATGACCATATTTCTCGTCCTCTCCGTTATTCCAGGGTCGAAGCATTAGTGGCACAAAAGGAAGTGTATAACTAGGGGCGTGGCAGGGTAAGGGGGCACATTCCCCcattataaaagaaaataagggATTTACCAATTGGGGCATGGCTGTTCCCCCAATATTCTTAATATTCTGTTTcatgccctccccccccccccccccccgcctatTATTTCTAGCCGGGATACAGCTCTGATACCACACAAATAATTGCATATTTGTACATGGCCATGACATATTGGCATTGTACAAGGGTATAGTGTTAAAACGGCATAAGCTCGCGTGTAAAACATAAGCTCATGTCATAGAACATAAGAGCGAGCATAAGCTGAAATCTAGAACGTAACGGCATAATGCCATAAGCATTAGCATGTAAAACGTTTTTAGACCATTCATTGTACTAGTGTGTTATAACGTGATATAACATAGGGACGCCATTCAGTATCCAGTAAAcacattttataaaaaagtaataaaatagGAACCAACCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7Y7X5	Zinc finger protein 711 OS=Danio rerio OX=7955 GN=znf711 PE=1 SV=1
A2ANX9	Zinc finger protein 711 OS=Mus musculus OX=10090 GN=Znf711 PE=3 SV=1
Q9Y462	Zinc finger protein 711 OS=Homo sapiens OX=9606 GN=ZNF711 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003780 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan
PF13912 all species →	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24379 all species →	KRAB AND ZINC FINGER DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032240063.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032240063.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

40TPM > 0

16Conditions

7.8Max TPM

4.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	7.15	7.59
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	4.65	6.57
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	5.05	5.74
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	4.67	4.92
whole 6 week old aboral regenerate · regenerate uncut	3	3	4.84	4.94
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	1.82	4.32
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	4.58	7.55
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	6.03	7.80
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	3.05	4.94
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	5.52	6.50
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	4.89	5.82
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	4.25	6.57
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	5.87	6.62
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	4.65	7.18
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	4.31	6.48
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.80	5.41

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.59
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.07
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	6.80
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.57
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.14
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.25
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.74
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.25
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.17
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.92
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.76
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.35
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.94
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.89
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.68
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	4.32
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	1.14
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.55
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	6.18
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.80
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	5.98
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	4.32
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.94
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.20
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.50
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.43
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	4.63
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	5.82
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.46
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.37
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.57
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.19
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.62
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.02
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	4.98
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	7.18
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	6.78
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	6.48
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	6.46
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	5.41
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.