Gene detail

Detailed information of XP_032240547.2 in Nematostella vectensis

Genomic Location: NC_064039.1:7027699...7039412
NR annotation: XP_032240547.2, uncharacterized protein LOC5515026 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515026

ATGCCGAAAACGGGAAGAAATCGCGTCTATCCTGACTTGAAGTACAAATTTATAAGAGGTCTGATTAAGGCTGAGCATTCACAGCGTCGTCACCAGTTTAATAAACAGGCTGCTGAGTGGACTTCTAAAGCTATTGTATCATTGTCTCTGGCTGAAGGACCTATAAAGTCACCCAAACAGGCTTCTCAACTCGAAGGGATTGGGAAAATAATTAAAACTAGGTTGGACGAGATCATAAAAGATGATAAGTACAGTGTTGAGCCACCAAATCCAGGTTGTCATGCCAGCACAGGATCAGGGCTGCTTGTGGCATTACTGAATGAAAGTGAAGCAATAGGCTTGTCCGACGGTGGTAGGCCTCTTGTTCCTGAAGATGATTTAAAAGAGGCATGTGCATGTATCTGTGATGAGAAATTCAACATCGTTTCTACCTTAGATGGAGCTGCAGCTATGTGCCCTGCCTGGTGGAGAATCAATGTCTTGATTAGTAGGGGATACATCAAAAAAAGAAGCAGAGGCAAGAAGACAGTTTATGAGTTGTTGCCACCTGGGGAAGATGTTGCTCATCGTCTGAGAGGAACACATATACTTCCTGCCCCACAAAGACTAACTGTCTCAAAGAACACTGCCAAGAATATATCGGCACAGTCAAGTAGCAAGCAATTTGACTCTCTCTACTGCACAGATACAGGAGATGACGGGGTCACTCTACTGGTTGATATCCATGAGCTTGGAGGTGATAATGTGCGATTAGGAGAGTTAAGTAGACGACTAAATGATTGGGGCGTACAGCACAAGTCCCGTTCCCTCCTCTGTGGGGATTACCAGTGGCTTTGGAGAGCTAATGGCTGTGAGTATACACTTCCAGTTTTGCTTGAGCGTAAGAGGGCAGATGACTTGGCTGACAGCATCAAGGATGGTCGATACACCAAGCAGAAAGATAGGATGCTAGCTTGGAGGGACAAGTTTGGGATCCTGTCAGATGATGTAAGCCTGCAGTACTTGGTAGAGTCTACACCAGCGGCTTACCGTGTGGGCTGTATGGATGGCTGTAATGGCGTTGGAAAGTGTGGGAACCCGAGCGTTGAGCAAGTTGAGGCTGCTGTAGAAGATCTTCGTGCCAGTAGAGATTTTACCCTTGTTGAGACACGCAGCATAGAAGGGTCCGTTGAATACTTAGCCAGCGTCACCACGGACCTGAAACGAAGGGTGTCTCGAGGTGATTTTGAAGCTTTGCGCCTGCTCAACAAGGGTACAGCGGCCTCTACTGCTGGTGGCGTGCGCGAAAGGTCATCCATTAAACGAATGGATCCCTCTGCAACAATTTCTAAGTCATGCTCACAATTTGATCAATATGATGAGCTGAACAGCCCATCTTGCATGAGAACCACTCATTCGGGGACCAAGGTAGAAAAAGGTGAAACAGGAGGGGAGAAAGATATTGCTTTGGTGCGTGCAATTCAGGCCAGTCTTCAAGACACGTACCCAAAGTTCGGTTATGATGATGGCTTTGACCACTCGCCGCGTAAGAGAAGCCTTAATAAAGGAAATCATACTGAAGTGAGTAGGCAACTAAAAGAAACAGAAGATAGTGATCTTACGCGCGCAATTCAGACTAGTCTAGAGGACACCAAAAAAGCCACTAACACTTGTCCAAAATTTAATGAAGAAGATATTTTGGAACACTCTCCACGATTTTATTTGAGGACTAAAGAAAATCGTACAGATCTAATAGAAAAGGAAGACAGTGCTTTTGTCAGTGCAATTCAGGCTTGTTTAATGGACTCAATCAAAACGTCTAACATATGTTCAAAATTGGATGATGAATGCATGTCAAAATACTCACCGCGAATCAGAAGCGTTAAGGCAAAGACAGATCTAAAAGATGTGAAAGGGGAGGCAGAGATAACGGAAGAAAGAGAACTAGCGCGTGCCATAAAGGCTAGTCTAAACGACACCACCAAACCTTTTAGCACTTGTTCTAAGGTTGATGACGACGATTTAATTGAATACTCAGCGCACAAGAGAAACCTCCATTCAGAGGTAGATCTGAGCGATTTGAATGGGGTAAAAGTGACGGACGGAGAACTAGCGCGAGCAATCCAGGCTAGCCTAAATGATACCCCCAAGACTAACATTTGGCCAACATCTGTTGGCCGCGATAACTTGGTTTACTCTCCGCGCGGAGAAGGCGTGAAAAGGGAAAACGGAACGGTGGATACTAATGATGCACAATGTCACAATAATGCTTCGTGTGCAAGCCAGGTGTCTGCTGACCAGAAAAGACGGAAACGATACAGGGCGATACAGATCGACGACTTATTCGATGACTGTGTGAAAAAACGGCCGAAGTCTGAGGTTGAAGCAGCTCCTCGATTAAATATCGCTATCACTTTAAACGAGATGGGATCTCATCAAGAAAAAAAACAGATTGAAATCCTTGACTCACAAGAAGAAGGCGCTTTTAACCCATTCGTGGATGGAGCTGTCTATGTCTTTGACGCGAGGTCAGATAAATACCATGGAAGAGGGACTAGCGACTGGAGCAACACGTGCACTGGTAAGGCATCGTCAGGCAATCAAGGGCTGTTGACAGAAGAGAGTGTGCGGAATCTTCCCGAGAACAGCCTCACAAAGCAAGAATCAAACTTATCTTCTAGTGTTTGTGTGACGGGGGAAGACTCTAGTGATATTTACGTTGAGCCTCAGGCTTTCTATGACAAGGAGAAGATCGGTTTGGTAATCGGCGTAATGCATGACTGCAGCCAGGCAGCAGTTCAGAACGCGCTGTTTCAAACGAAAGGAAGTGTTGAAGAAGCAATCGTGGTGTTGCTTGATAACAAAAGTGACTCCACTCCATGTGATGTCATCGATCTCACGTAA

Transcript

rna-XM_032384656.2

ACGAAGGGGGCGCGAACCGTTAAACTACAAACGTCTAAACATTTGTTTGTGCTAGTGAAATGAGGCATAAAAGCGTTTCTTTTTGAAAAGCAAAGTCGAGAAACGAATTTTATGTGGTCTATATCCCCAAGATGAAAATATGCCGAAAACGGGAAGAAATCGCGTCTATCCTGACTTGAAGTACAAATTTATAAGAGGTCTGATTAAGGCTGAGCATTCACAGCGTCGTCACCAGTTTAATAAACAGGCTGCTGAGTGGACTTCTAAAGCTATTGTATCATTGTCTCTGGCTGAAGGACCTATAAAGTCACCCAAACAGGCTTCTCAACTCGAAGGGATTgggaaaataattaaaactaGGTTGGACGAGATCATAAAAGATGATAAGTACAGTGTTGAGCCACCAAATCCAGGTTGTCATGCCAGCACAGGATCAGGGCTGCTTGTGGCATTACTGAATGAAAGTGAAGCAATAGgCTTGTCCGACGGTGGTAGGcctcttgttcctgaagatGATTTAAAAGAGGCATGTGCATGTATCTGTGATGAGAAATTCAACATCGTTTCTACCTTAGATGGAGCTGCAGCTATGTGCCCTGCCTGGTGGAGAATCAATGTCTTGATTAGTAGGGGATACATCAAAAAAAGAAGCAGAGGCAAGAAGACAGTTTATGAGTTGTTGCCACCTGGGGAAGATGTTGCTCATCGTCTGAGAGGAACACATATACTTCCTGCCCCACAAAGACTAACTGTCTCAAAGAACACTGCCAAGAATATATCGGCACAGTCAAGTAGCAAGCAATTTGACTCTCTCTACTGCACAGATACAGGAGATGACGGGGTCACTCTACTGGTtgatatccatgagcttgGAGGTGATAATGTGCGATTAGGAGAGTTAAGTAGACGACTAAATGATTGGGGCGTACAGCACAAGTCCCGTTCCCTCCTCTGTGGGGATTACCAGTGGCTTTGGAGAGCTAATGGCTGTGAGTATACACTTCCAGTTTTGCTTGAGCGTAAGAGGGCAGATGACTTGGCTGACAGCATCAAGGATGGTCGATACACCAAGCAGAAAGATAGGATGCTAGCTTGGAGGGACAAGTTTGGGATCCTGTCAGATGATGTAAGCCTGCAGTACTTGGTAGAGTCTACACCAGCGGCTTACCGTGTGGGCTGTATGGATGGCTGTAATGGCGTTGGAAAGTGTGGGAACCCGAGCGTTGAGCAAGTTGAGGCTGCTGTAGAAGATCTTCGTGCCAGTAGAGATTTTACCCTTGTTGAGACACGCAGCATAGAAGGGTCCGTTGAATACTTAGCCAGCGTCACCACGGACCTGAAACGAAGGGTGTCTCGAGGTGATTTTGAAGCTTTGCGCCTGCTCAACAAGGGTACAGCGGCCTCTACTGCTGGTGGCGTGCGCGAAAGGTCATCCATTAAACGAATGGATCCCTCTGCAACAATTTCTAAGTCATGCTCACAATTTGATCAATATGATGAGCTGAACAGCCCATCTTGCATGAGAACCACTCATTCGGGGACCAAGGTAGAAAAAGGTGAAACAGGAGGGGAGAAAGATATTGCTTTGGTGCGTGCAATTCAGGCCAGTCTTCAAGACACGTACCCAAAGTTCGGTTATGATGATGGCTTTGACCACTCGCCGCGTAAGAGAAGCCTTAATAAAGGAAATCATACTGAAGTGAGTAGGCAACTAAAAGAAACAGAAGATAGTGATCTTACGCGCGCAATTCAGACTAGTCTAGAGGACACCAAAAAAGCCACTAACACTTGTCCAAAATTTAATGAAGAAGATATTTTGGAACACTCTCCACGATTTTATTTGAGGACTAAAGAAAATCGTACAGATCTAATAGAAAAGGAAGACAGTGCTTTTGTCAGTGCAATTCAGGCTTGTTTAATGGACTCAATCAAAACGTCTAACATATGTTCAAAATTGGATGATGAATGCATGTCAAAATACTCACCGCGAATCAGAAGCGTTAAGGCAAAGACAGATCTAAAAGATGTGAAAGGGGAGGCAGAGATAACGGAAGAAAGAGAACTAGCGCGTGCCATAAAGGCTAGTCTAAACGACACCACCAAACCTTTTAGCACTTGTTCTAAGGTTGATGACGACGATTTAATTGAATACTCAGCGCACAAGAGAAACCTCCATTCAGAGGTAGATCTGAGCGATTTGAATGGGGTAAAAGTGACGGACGGAGAACTAGCGCGAGCAATCCAGGCTAGCCTAAATGATACCCCCAAGACTAACATTTGGCCAACATCTGTTGGCCGCGATAACTTGGTTTACTCTCCGCGCGGAGAAGGCGTGAAAAGGGAAAACGGAACGGTGGATACTAATGATGCACAATGTCACAATAATGCTTCGTGTGCAAGCCAGGTGTCTGCTGACCAGAAAAGACGGAAACGATACAGGGCGATACAGATCGACGACTTATTCGATGACTGTGTGAAAAAACGGCCGAAGTCTGAGGTTGAAGCAGCTCCTCGATTAAATATCGCTATCACTTTAAACGAGATGGGATCtcatcaagaaaaaaaacagattgaaatCCTTGACTCACAAGAAGAAGGCGCTTTTAACCCATTCGTGGATGGAGCTGTCTATGTCTTTGACGCGAGGTCAGATAAATACCATGGAAGAGGGACTAGCGACTGGAGCAACACGTGCACTGGTAAGGCATCGTCAGGCAATCAAGGGCTGTTGACAGAAGAGAGTGTGCGGAATCTTCCCGAGAACAGCCTCACAAAGCAAGAATCAAACTTATCTTCTAGTGTTTGTGTGACGGGGGAAGACTCTAGTGATATTTACGTTGAGCCTCAGGCTTTCTATGACAAGGAGAAGATCGGTTTGGTAATCGGCGTAATGCATGACTGCAGCCAGGCAGCAGTTCAGAACGCGCTGTTTCAAACGAAAGGAAGTGTTGAAGAAGCAATCGTGGTGTTGCTTGATAACAAAAGTGACTCCACTCCATGTGATGTCATCGATCTCACGTAAGGCTGTgacaaaattattaaaataatgccGTCTCTTGGTGCCATTGCCTtgacagagaaaaaaagaacttCAATGAAGTCATTTGCGCGGCATGCTCTGTTATCATTTCACGTGGAGTGCACGTCCTTAATTGATAGCGTCACTTGGATGGCATGATGACGTCAGCTGGATGAAGGCCTGTGTTGATGTCACTTGGTACACAAGCCTTATGACGTCACTTGGACGAAATGCCCTGTCATGAGTaactataaatcaacacaattatatatttagaatttaaaaaaaaattagcaacTTTCTCATCAAAGGTCTACGGTCCGACTATCTCATCGGAATAAAAGTTAATACTGTTCATGTTTCAGATGTGAAGATATTTTGTTAACacaattttatatttaaagaaagttagtattttaaataaaaaaatttgtaATTTTACTTAAAATGGTCACTATATTTgacgcaaaaataaaaacatataacgTAGAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6CPQ8	Crossover junction endonuclease MUS81 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MUS81 PE=3 SV=1
Q59NG5	Crossover junction endonuclease MUS81 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MUS81 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013602 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|UIM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02809 all species →	UIM	Ubiquitin interaction motif	Motif	Interproscan
PF02732 all species →	ERCC4	ERCC4 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003903 all species →	Conserved_site	Ubiquitin interacting motif	Interproscan
IPR033309 all species →	Family	Crossover junction endonuclease Mus81	Interproscan
IPR006166 all species →	Domain	ERCC4 domain	Interproscan
IPR027421 all species →	Homologous_superfamily	DNA polymerase lambda lyase domain superfamily	Interproscan
IPR047416 all species →	Domain	MUS81, XPF-like nuclease domain	Interproscan
IPR011335 all species →	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13451 all species →	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000712 all species →	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000727 all species →	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006308 all species →	Biological Process	DNA catabolic process	Interproscan
GO:0008821 all species →	Molecular Function	crossover junction DNA endonuclease activity	Interproscan
GO:0031573 all species →	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0048257 all species →	Molecular Function	3'-flap endonuclease activity	Interproscan
GO:0048476 all species →	Cellular Component	Holliday junction resolvase complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032240547.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032240547.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

38TPM > 0

16Conditions

8.2Max TPM

2.9Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	4.17	5.11
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	3.31	4.49
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	2.00	2.28
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	3.31	3.85
whole 6 week old aboral regenerate · regenerate uncut	3	3	2.07	2.54
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	4.54	8.16
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	2.81	4.32
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	3.45	5.00
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	2.26	3.71
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	2.46	3.82
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	3.64	4.29
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	2.72	4.33
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	4.55	5.65
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	1.24	3.73
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	2.67	4.79
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.21	3.62

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.11
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.83
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.56
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.49
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.79
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.65
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.28
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.10
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.64
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.85
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.72
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	2.36
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.54
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.52
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.15
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.16
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	5.45
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	4.32
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	4.10
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	5.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	3.02
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.32
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	3.71
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	3.09
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	3.82
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	3.57
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.29
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	3.36
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	3.27
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	4.33
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.84
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.65
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	4.28
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.72
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	3.73
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	4.79
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.20
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	3.62
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.