Gene detail

Detailed information of XP_032240642.2 in Nematostella vectensis

Genomic Location: NC_064039.1:14683842...14699523
NR annotation: XP_032240642.2, mitochondrial proton/calcium exchanger protein [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515135

ATGGGTTTGCAACAGATCTTTGCCATAAATGGCTTTGCCTATAGAAGATGTTTTGTAGTGTCACGACATTTTTCAACGACTTGTAACCGTGGATTTCAGACCGTCTACGGAAGGAATGCAAGGAGGCTGAGTAGCTTGAGCAACAAAACCAATTGCCATGCTCAAAGACGCGGTGCAGCGCATAATGGGCTTAATTTTCCATCAAATAACAAGCTTGGCCAATGGAATAAACATCTTCTATCTCCAATCCAATTAATTCAACTACATAGACATATTATTAGTTCTTCAAGCACAGTTTCATTAGATACAAGAGACGATTTCTATTTGCTTAAAAATGAACAGCCATTGCAAAATCAGTATAAGTTTTCAATTTCTGAGAAGTCACCATTTGTATATGCCAGGGGGGTTTCCACATCCTCCTTTAAATTTCTAAACAGCGTAAATAGTAATTTATCTACAGTAAGTTTCTTAAGGGCTTTGCACACCTCCAATGCATTGTATGATCCACCTGAGACATCAGCCAAGTCAAAAGAGCCTTTGAGACAAGAGGAGAAGTCCCGTGTTGAGGAGACAGTTGAGCAAATTAAAAAGAGAAAGGAGGAAGCAAAAGAGCTAGCTTTCAAGTATGGATGCAGCCCAGAAGATCTGGTAGAGTCCAAGGCAAAAGCTTTGGCACAAGCAGAGAAAAAAAGTCTTTGGGAGAAAGTGAAGCATGAGGCTGTTCATTATTACAATGGATTCAAGTTGTTGTATTTTGAAACAAGAATTTCTTTAAGGTTGCTTTGGCAAGTTATGAATGGGAAGAGCCTGACACGCCGAGAGCGTAGGCAGTTTTTGCGGACAGTGGCAGATATGTTCCGTCTTGTACCATTCCTTGTTTTCCTTGTTATCCCCTTCATGGAATTCTTGCTGCCAGTTGCAGTAAAACTTTTCCCAAACATGCTGCCCAGCACATTTGAAGATAAATCTAAAAAGGAAGAAGCAAGGCGCAAAGAGCTGAAGGGTAAGATAGAACTGGCCAAGTTCTTGCAGGACACTGTGGAAGAAATGGCTGTTACTGCAAAACAGAAGAAGAACCAGGGGGCTGTGGTGTCTTTTGCTAACTTCTTTGATAAGATTCGTACGAGAGGTGAGCAACCCAGCAATGAAGACATCCTGAAATTCTCCAAGCTCTTTGAAGATGAGATCACACTTGATAACATGAGCAGGGGCCAACTCAAGGCAATCAATGGTCTTCTGCTTCTGCCTTCCTATGGAACAAACAACTACCTGAGATTTCAGCTACAGATGAAACTTCGGCAGTTGCGTACTGATGACTTGATGATCAAGAAGGAGGGTGTTGACAGTTTGAATGTCCAAGAATTGCAGTCTGCATGCCAGGCCAGAGGCATGAGGGCCATTGGTGTTCCAGAAGCCAGGCTGAGGTCACAGCTTAGACAGTGGTTGGAGCTCCATCTAGATGAAGAGGTTCCCATTTCCCTGCTTCTGATGTCCAGGGCCTTGTACCTTCCAGAGACAGTCAGCAATGTTGACAAACTGAAGGAGACCTTGTCAAAGCTGCCAAACAATCTGGTTGGAGAGACTGAGGTCAAATTGGCTGAGTTGTCAGGAGAGCTGGTTGACAACAAGCTGCGTCTTGAGATACTAAGACTAGAAGAACAAAAGATCGCGGAGGAGAAGGAAGAAAGCAAAAAAAGGAAGCAAGAAGAAGAGGCGGAAAGAGTCAGAAAGGCCGCTGCTGAGACAAGAGAACTGTTAATTTATGAGGCAGAAGCGATTGCTGTGGATGAAGAAATCTCCAAGAAAGATTGGGAATATGTGAACAAAGCGATTGAAAACCCTCGTGAAGTGCTCGAGAGGATCAAAGGCGACCGCGTGGAATATCAAGAGGAATTGAAAGAGCTCGAGCTTGAAGACGAGGAGAAGCTACTGACTGAATCCCTGGGCTCCACTAGACTTGGCAAGCGTGTTGACAAGATGATATCAAGCATTGAGCAGAAGCTACAAAACCTTGAGATGGAACTGCGGGAGTCGCCGGAGTCTACCAGAATCGATGCTGATGGGGACGGAAAGATCACGACAGACGAGCTGATAATTGCCCTTCAGACACTGCAGAACCACCCGAGCGAGGCCAAGTGCCGCAAGATCGCCGAGATGCTGGACCAAGACCACGACGGCGCTCTGGAACTCGACGATATCGAGACGGTTATTGAGCTGCTTTGCATGGAGGATGTGGACTTGAGCCCGGAGCAAATCGCTGAGATAGTCCAGCTGATAAAGCGAGAGAATGAAATCAAGGGGGCATCTAAAACGACGCCCCCAAACCAACCCCCTGAACCAGATGACGAAACGATGGAGCAACAACCAGAATCTGATGAGCAACAGCCTCAAGAGAAACAGTCCTCGAAGGACCCTTAA

Transcript

rna-XM_032384751.2

CTCAAGTAAAGTTAGCAGTGAAAACACTTCGCGTGCAACAAGCATGAAAGCGGAGCACATGGGTCGTGCTAGTATGTAAAAGGACAGAAACCAACCAAAACATTCACCGCCATCTTTATTATTGTCCTATGATGGAGTCCTGTCCGTAAACAATGGATAAAATATGGGTTTGCAACAGATCTTTGCCATAAATGGCTTTGCCTATAGAAGATGTTTTGTAGTGTCACGACATTTTTCAACGACTTGTAACCGTGGATTTCAGACCGTCTACGGAAGgAATGCAAGGAGGCTGAGTAGCTTGAGCAACAAAACCAATTGCCATGCTCAAAGACGCGGTGCAGCGCATAATGGGCTTAATTTTCCATCAAATAACAAGCTTGGCCAATGGAATAAACATCTTCTATCTCCAATCCAATTAATTCAACTACATAGACATATTATTAGTTCTTCAAGCACAGTTTCATTAGATACAAGAGACGATTTCTATTTGCTTAAAAATGAACAGCCATTGCAAAATCAGTATAAGTTTTCAATTTCTGAGAAGTCACCATTTGTATATGCCAGGGGGGTTTCCACATCCTCCTTTAAATTTCTAAACAGCGTAAATAGTAATTTATCTACAGTAAGTTTCTTAAGGGCTTTGCACACCTCCAATGCATTGTATGATCCACCTGAGACATCAGCCAAGTCAAAAGAGCCTTTGAGACAAGAGGAGAAGTCCCGTGTTGAGGAGACAGTTGAGCAAATTAAAAAGAGAAAGGAGGAAGCAAAAGAGCTAGCTTTCAAGTATGGATGCAGCCCAGAAGATCTGGTAGAGTCCAAGGCAAAAGCTTTGGCACAAGCAGAGAAAAAAAGTCTTTGGGAGAAAGTGAAGCATGAGGCTGTTCATTATTACAATGGATTCAAGTTGTTGTATTTTGAAACAAGAATTTCTTTAAGGTTGCTTTGGCAAGTTATGAATGGGAAGAGCCTGACACGCCGAGAGCGTAGGCAGTTTTTGCGGACAGTGGCAGATATGTTCCGTCTTGTACCATTCCTTGTTTTCCTTGTTATCCCCTTCATGGAATTCTTGCTGCCAGTTGCAGTAAAACTTTTCCCAAACATGCTGCCCAGCACATTTGAAGATAAATCTAAAAAGGAAGAAGCAAGGCGCAAAGAGCTGAAGGGTAAGATAGAACTGGCCAAGTTCTTGCAGGACACTGTGGAAGAAATGGCTGTTACTGCAAAACAGAAGAAGAACCAGGGGGCTGTGGTGTCTTTTGCTAACTTCTTTGATAAGATTCGTACGAGAGGTGAGCAACCCAGCAATGAAGACATCCTGAAATTCTCCAAGCTCTTTGAAGATGAGATCACACTTGATAACATGAGCAGGGGCCAACTCAAGGCAATCAATGGTCTTCTGCTTCTGCCTTCCTATGGAACAAACAACTACCTGAGATTTCAGCTACAGATGAAACTTCGGCAGTTGCGTACTGATGACTTGATGATCAAGAAGGAGGGTGTTGACAGTTTGAATGTCCAAGAATTGCAGTCTGCATGCCAGGCCAGAGGCATGAGGGCCATTGGTGTTCCAGAAGCCAGGCTGAGGTCACAGCTTAGACAGTGGTTGGAGCTCCATCTAGATGAAGAGGTTCCCATTTCCCTGCTTCTGATGTCCAGGGCCTTGTACCTTCCAGAGACAGTCAGCAATGTTGACAAACTGAAGGAGACCTTGTCAAAGCTGCCAAACAATCTGGTTGGAGAGACTGAGGTCAAATTGGCTGAGTTGTCAGGAGAGCTGGTTGACAACAAGCTGCGTCTTGAGATACTAAGACTAGAAGAACAAAAGATCGCGGAGGAGAAGgaagaaagcaaaaaaaggAAGCAAGAAGAAGAGGCGGAAAGAGTCAGAAAGGCCGCTGCTGAGACAAGAGAACTGTTAATTTATGAGGCAGAAGCGATTGCTGTGGATGAAGAAATCTCCAAGAAAGATTGGGAATATGTGAACAAAGCGATTGAAAACCCTCGTGAAGTGCTCGAGAGGATCAAAGGCGACCGCGTGGAATATCAAGAGGAATTGAAAGAGCTCGAGCTTGAAGACGAGGAGAAGCTACTGACTGAATCCCTGGGCTCCACTAGACTTGGCAAGCGTGTTGACAAGATGATATCAAGCATTGAGCAGAAGCTACAAAACCTTGAGATGGAACTGCGGGAGTCGCCGGAGTCTACCAGAATCGATGCTGATGGGGACGGAAAGATCACGACAGACGAGCTGATAATTGCCCTTCAGACACTGCAGAACCACCCGAGCGAGGCCAAGTGCCGCAAGATCGCCGAGATGCTGGACCAAGACCACGACGGCGCTCTGGAACTCGACGATATCGAGACGGTTATTGAGCTGCTTTGCATGGAGGATGTGGACTTGAGCCCGGAGCAAATCGCTGAGATAGTCCAGCTGATAAAGCGAGAGAATGAAATCAAGGGGGCATCTAAAACGACGCCCCCAAACCAACCCCCTGAACCAGATGACGAAACGATGGAGCAACAACCAGAATCTGATGAGCAACAGCCTCAAGAGAAACAGTCCTCGAAGGACCCTTAAACGACGCAACGCTTGTAATTACAATACAAGCtacattgtatttttttccgaCTTACCACCGGCAAAGTGTGCTGTAACTAGAAAATCCAGCGCCTGAGAATAATAAAGTTTATAATTCTCAGGCGCCATTTTCATTTATATAACCTTTGAAGAATACTTTGCCCTTCGCGGTGCTAGCTGTGTGTTTTCTTGCTgttgtgttttcttgtcatttttccgtaattttgaatttgttttatgtCGGGGTGTTTTCAACATGATGTTTTCAACAAACAAGTGCAAAGGCGACTTTTGTGATAAGACAATTATTATGTGGTCCAATAAGGGTCCTCCTTGAACGGTGGAAAAATGCTAGAATGTTCATTCTGATTAAAAGTGTAAGATATCTAGTCAGACCGGGGAAAATACTCAATAAAACAGTTTCTGTGGaagtaaaaaaattttcttGCGCTTCTCATCATTCGACAACTTTAACACCTTTGTTCGCTTGTACATTGAAATTTTCAGAATTGATAAATCTAGGCGTTATTTCTATCTAATATAATATGCAGTTCATATGGATAACATATTTCGGTATTTCGGTAGACCTTCCGGTCCGACTCGAGCAACCCGTTTAGTAGGTAATGGCAATCGAAATACGGTGATCGACAGTGTTTCCAGGCAATTGCCCTTTGTGGAAAGCGCGGAATCAAATAGGGTTTCTCAAAGCATTCGAGAAAAGTAACGAAATGCGTTTGGAAAGCTCTAGATGTTTGATTTCTGTTAGAGGAATATAGAAACTAATGAAAATGATTAATCTGGATGTTGTGCAATAAAAAGATAATGTGACATTTTGGTATTTGTTAAAGTAGTTTGCAATCTTAAATGGAATTCTGTTTAGCATGTTTTCGAACATAATggtggatgttttttttaactattaAAGACTAAACAACTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZK33	Mitochondrial proton/calcium exchanger protein OS=Gallus gallus OX=9031 GN=LETM1 PE=2 SV=1
O95202	Mitochondrial proton/calcium exchanger protein OS=Homo sapiens OX=9606 GN=LETM1 PE=1 SV=1
Q5XIN6	Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005050 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07766 all species →	LETM1_RBD	LETM1-like, RBD	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033122 all species →	Domain	LETM1-like, ribosome-binding domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR044202 all species →	Family	LETM1/MDM38-like	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14009 all species →	LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006875 all species →	Biological Process	obsolete intracellular metal ion homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17800	LETM1, MDM38; LETM1 and EF-hand domain-containing protein 1, mitochondrial	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032240642.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

47TPM > 0

16Conditions

59.0Max TPM

35.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	37.80	41.10
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	26.56	31.85
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	44.50	55.45
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	49.94	59.04
whole 6 week old aboral regenerate · regenerate uncut	3	3	30.06	32.60
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	46.41	49.10
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	34.54	39.64
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	36.60	40.50
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	23.45	36.32
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	35.46	39.30
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	32.27	34.88
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	34.41	41.12
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	35.97	38.28
whole 6 week old aboral regenerate · regenerate 48hpa	3	3	39.46	41.64
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	32.25	36.63
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	32.41	41.47

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	41.10
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	36.22
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	36.07
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	31.85
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	24.54
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	23.30
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	55.45
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	44.17
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	33.87
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	59.04
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	52.26
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	38.53
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	32.60
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	30.88
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	26.69
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	49.10
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	46.21
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	43.91
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	39.64
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	32.13
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	31.86
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	40.50
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	36.42
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	32.89
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	36.32
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	34.02
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	39.30
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	34.22
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	32.87
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	34.88
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	32.56
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	29.37
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	41.12
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	31.84
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	30.27
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	38.28
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	35.44
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	34.18
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	41.64
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	39.25
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	37.48
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	36.63
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	36.28
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	23.85
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	41.47
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	32.02
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	23.74

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.