Gene detail

Detailed information of XP_032240671.2 in Nematostella vectensis

Genomic Location: NC_064039.1:14593004...14619922
NR annotation: XP_032240671.2, cytoskeleton-associated protein 5 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515140

ATGGCTGCTGATCTCGATCTGACAAAAATATCCTTAGACGATCGGCTAACGCACAAGGTTTGGAAAGCGAGGGTAAATGGCTACGAAGAACTTGTGCAGATATTTAAAAGGACAGATGATGAGACGAGTAGCGAATTCTCAAAGTACCTTGGGTTTATGAAGAAGATGGTTGTGGACAACAACGCCGTTGCACAAGACAAGGGGCTCGAAGCAGTTCTAGCTTTTCTTGAAGGAGCGGCCCCTTCAATAAGTGGAAGGGTTGCTGGTGACGTTATATGTGGATGTATCACCAAATGTCTCAATGCACGGACAAAGACAAAAGAAAAAGGAATTGAAATTATTCTTATGTATGTAGAAGTGGAAAAACAAGATATAGTCCAGGAAGAGTTATTAAAAGGTCTTGAGAATAAACAGCCCAAAATAGTAGCTGCATGCATTAATGTCTTCACGCAAATCATAAGTTTATTTGGTGGCAAGATTTTCCTTTTGAAGCCTATTGTTAAAGTCTTGCCCAAACTGTTTGACCACAGTGATAAATCTGTCCGTGAGGAGGCCAAACTTCTGGCAATAGAAATTTATCAATGGATCAGAGATGCATTGAGGCAGCAATTACAGAATATCAAACCTGTCCAGTTGAAAGAACTTGATGAAGAGTGGGGTAAGCTACCTCCAGCCCCCCCTGCACCCACTAGACTAACCAGGACGCAGCAGAAGAAGCTTGAAGAGCAGCAAGCACAGGGAATTTCTGATGCTCCTTATGCTGCTGATGAAGATGATGGGGGAGCCGTGGCAGAAACAATAGACATCGATCCTTATGAAATGATGGATGCAGTTGAGATCCTGTCAAAGCTTCCTAAAGATTTCTATGAGAATTTGGAGGCGAAAAAATGGCAGACTAGAAAAGAAGCTTTAGAAGCACTTGAGAAGCTGGCCAGCAACCCCAAACTTGAGGGAGGGCAATACGGGGAACTTATGTCAGCCTTAAAAAAGATCATCAGCAAAGATGCCAATGTGATGGTGGTCACATTGGCTGCAAAGTGTGTGGCGTATCTAGCCACTGGCTTGCGTAAGAAGTTCTCTGCCTATTCTGCTATGATGGTATCAGCCATACTCGATAAGTTCAAGGAGAAGAAAACTACTGTTGTAACAGCTCTCAGAGATGCCATAGACGCTGTCTACCTAACAACTACCTTACCTGCAATGCAGGAAGACCTCTTGGCTGCCCTAGATAATAAGAACCCTAGCATCAAGGAAGAAACTGCCAAATTCTTGACTCGCACATTCTGCAAGAGTGTTCCTTCACAAGTGCCCAAAGCTTTCATGAAGCCAATTTGTGCAAATTTGGTCAAGAAAATGGATGACACCGCTGGTCCTGTGCGAGATGCGGTTGCTGAATCACTAGGAACCCTTACCAAGCTCATAGGAGAAAAAGCGATGACCCCTTACATTGACAAGCTTGATAAGCTCAAGGCTGACAAGGTGAAAGAGTTTGCAGACAAAGCCGAGATCAAGGCAAAACCTGGATCAGGTGGTGGTGGTGGGGGTGGAGAAGGTGCAAAGCCTGTTGCTGCTAGTAAACCTGCAGCTGCTGCACCGGCCAGTAAACCGGCTCCTGTCAAAAGGCCGGCTGCAAAGAAAGGTCCTCCAAAACCCTCAGGAGGGGCGTCAAAAGGGCCTCCGAAAAAGAAGCCTGCTGTTAAGGCCGGTGGCAAGAAGGCTGGTCCATCTGCCACCTTCAATGAAGTCAAAGAGCCTGAGTTGACAGATGAAGACGTTCAAGCTAAAGCTGCCGATCTTTTCCCTGCTGATCTGTTGGAGAAGCTAGCTCATACCAACTGGAAAGAGAGGATGGCGGGTATGGAGGAGCTCCACAAACTGGTGGAGAGCATGGATGACAAAACGATGGAGTGCCAAGTGCTTATCAGAGTGCTCGGCAAGAAACCGGGATGGAAAGACAACAACTTCCAGGTACTCAAGTCAAAGTTTCAGCTGTGTGGGATAATCGCTGGCAAGGGGAAAACATTCTCTAGTCGTAGTGCCGAGTACGCTATTCCAGGACTGGTAGAGAAAATTGGAGACATTAAGCTGAAAGACGCCGTCAAAGAGACGTTGATGATCATATCCGAAAAGCTAAACCTGGGTTATGTCAGTCTTAAGGTCTCACAAATTGCTGGGGGACAAAAGAACCCTAAGGTTATATCAGAGTCTCTTTCTTGGCTTGGCAGTGCTCTCAAGGACTTCGGATTCAAAATTGACCTAAAGCCACATATTCAATGCCTTAAGGATGCTCTGGCTAACACAAACCCTGCCGTGCGAACTGAAGCCATATCTCTCATTGGAGTGTTGCATATGTACGTTGGCCCAACAATAAGGGTGTTCTTTGAGGAAGAGAAGGCGGCTTTGCTGTCTCAAATCGATGATGAGATTGCTAAGGTAAAGGACGAAAAACCTCCTGCACCCACCAGAGGACTGAAGCCTGCAGCTGCCGATGGTGACGATGATGGTGAGGAAGGCGGGGACGATGCAGGCGGAGATGAGGATGATGGCAGCTCAGCAAATCTCGAGGATCTTATTCCTAGAAATGATATTAGTAATGAAATCAAACCTGACCTTATCGATATGCTGGCAGACAAGAACTGGAAAGTTAGAGGCGAAGGCCTGCAAAAGGTTCAGGAGATACTCGCTGCCGCCAAGTTCATCACTCCTGACCTTGGGGATTTGCCGTCTGCCTTGAAGGCACGTCTGGGAGACTCTAACAAGAATCTGGTAATTACAACCCTGAACATCTGCGGCACGATTGCTACGGCGATGGGAGCGAATGTGAAGAGACACTTTGGTACGCTTGGTCCCGCCATGTTCAGCACGCTAGCTGACGCAAAGCCTCACCTTCGCGCTGCCGGTATAACGGCACTCAACGCCTGGCACAAGGAGATAGGCATGGTGGCTTTCATTGAAGGAGAAATACTGTTTGGCGCACTTAGCACTGAGAACCCCTTCCTCAGGATCGAGGTTCTGGGTTGGCTCGAGGAGAAACTCCCTGGGGAACAAAAACTTCCCCCAGCCCTCTCCACTATATTGCCGCCCATGTACTCCTGCTTAGAGGACCGCAACGGGGATGTCAGGAAGAAGGCGCAAGCTGCCGTGCCAGCGGTCATGGCCCATCTTGGCTATGACGTCATGCTCAAACAAGCCAACAAACTGAAGCCTGCCTCCAAGCCTGTGGTGGTTGGCATACTGGAGAAGTTGCGAGGAACCGTCCCTGAGCCCGCGAAGAGCGCAACCAAGGCATCCAGTAAAAGTGCTTCCAGCAAAACCGAATCCGCCTCCACTACAAGCGCAACTCCCGCCGCGAATAGCGGTCCATCTAAACGCCCGAAATCTGCGGTGCAGTCTAGTAAACAGCCAGCCAAAACGAGCAAAAAGAAGGCGAACGTTGAAGAAGAGACTGGACCTCCACTTATTGCCAACAATGAAAAAGACAAGAGGATAAAAGATGAGAAAGATCTCAAGGTCATGAAGTGGAACTTCAGTACGCCCCGCGATGAGTTCATAGAACAGCTCAAGGAACAGATGAGCAAGTGCTTCAGTAAGACAATCATGAGCCAGCTCTTCCACCCGAACGACTTCAAACAGCAGCTGAAAGCCATCGCTACACTCCAACAGTGTGTGGAAGGCGAAGATGCGGAGTACAAGACTGAGGCTATGCAGTCCCTTGACATGATCCTCAAGTACCTGACCCTGAGGTTCTTCGACACCAACACCACGGTGCTCATCAAGTGTCTTGAATTCCTGGTCGCCCTGTTCACCATGCTGGCAGAGTCTGATTACCAGATGTTGGAGCACGAGGCGTCAAGCTTCATCCCCTACCTCGTGACCAAGGTGGGCGATCCTAAAGACGTTGTGCGCAAGATGATACGAAGCCTGTTTAAGTTGATCACCAAGGTTTACCCAGCCAGCAAGATGTTCAACTACGTGTCAGAGGGGATCAGCTCAAAGAACTCTAAGACAAGAATGGAGTGTCTGGAGGAGCTGGGCTGCCTTATCCAAGTGTATGGCATGAACGTGTGCCAGCCCACACCTCCTAAGGCTATCGCTGCCATCGCCTCTCAAATCGGTGACCGTGATAATGGAGTGCGAAACGCGGCACTGAATGCAGTGGTCGAGGCTTACTTCTTGGTTGGAGAAACCGTGTACAAATACGCTGGCAGGCTAAACGACAAGGACATGAGTCTTCTTGAGGAGCGCATCAAAAGGTCGGCCAAGAATCGTCCGTCCACTGCGGCTGCCCCAGAGGAACCTAAACCGGTTGCGAGACAGCGAGGTCCAACCGCCGACAACGATAAGAAACCGGCAAAAGCTCAGCCTGTAGCGAGACCCGCAACTGCGCCTGCCCTCAAGCGTGACGACAACATTAAGCGTGAGTTCGCTCTGGACTATGACACCATCGAGGGCGGCTCGTCAGAAGCGGATGTTTTCGTCCCAAATCTGGTCTCGCACGAGTCTGTCGAAGACTTGATCAGCGAGCCTATACAGCGACCGACTACCAAGACGCCTTCTTCGCCTCACCTTGGCGTATTTAGCCGGACTTCAGCACCCGCTGCCCTCAATTACGTCATCTCACAGATCGCCAGCAATGACATCATGGCTAGCACCCAGGCCCTCGTGCAACTCGAGGTCGTCCTTCGAAATAAGTCTGATGGCGCTATCGTCAAACACGTCGATCAGTTTTTAAACGCGGCTGCTCTTCAACTGAACATAATTCTGACAACACACATCGGCAACGAGGAAGTGGACGAGCAAGCAGTGACCCGTCTCCTTAACTGTCTCGTGGACGCCATCATGTCTCTATTCGCCAACCCGTCCCTTGCTGCCGAGGTGTCTCGCGACACCCTGAAGCACCTAGTCCAAAGCATGTTGACCACCGTGCTGGATGACAGACTGGTTAGCCTGAAGGAAGGGACGCAAATCATTCGCACTTTTAATGTGTTGATGGCAAAAATCATAGATCGAACCAATCCCACAGTTTGCATGGGCGCCCTGATCCGCTTGCTCCAGGACTCTGTCAAGATGCTCCAGGATCACGTCGGCAACTCGCTCAGCTCGCCTAAATTTGTGGAGTTAATAATGAAGGGCATGTGGAAGATGGTCCGTAGTCTTCCTAAGACTATCAAGGACGTGAATGCGGAGCTGGTTCTCCTGGACATCCACAAGTTCCTGGTAGCCCACCCCCCTCAGGTGTGGAGGTCGCGTGCTGACGACACTCCTCTTAGGACCATCCGCAGTGTCCTCCACTCACTCGCCAAACTGAAGGGCATCGACATCCTGGGTTGCACGAATCTCATCGAAGACGCTGAGCAAAGCGAGGTGTACGGATACCTGCACAAGGCACTCAAGACAGGCTACAAGCCGCCGTCCACAAGCGACCCGATCAACAACAGTACGGAGGAGAGCAAGAACGAGAAGAACGGGCATGCCGTGCCGCCCCCGGACTTGCTGGAGGGTGTACAGGGATCCAGGGGTACTTCAGTAACGAAGCTGAACGAAAAGCTCGCCGAGATATTCAGAATGATTGCGTCAAAAGAAAACACCAGAGAGGGTCTAGCTCAACTGTACGATCTCAAGCTACGGTACCCACAGGCGGACACCGACCCCTTCCTCCAAAAGACCTCGCCCTTCTTCCGTAACTACATCGAGAGAGGGCTGCGAAATATCGAGATGGAACGCAAAGGGAAGAAGGGTGCGAACGAAAACACGTCTTCTAGCAGCACGGTGATCAGTAATCCACCAGAGGTCCCCCAGCAGGCCGGCGAGGGTCCCGCGGCATACATGGACAGACTGCGCATACTCAGAATGAAATCGGGCCTCGGCAATAACACCAACATGGACGCCACCAAGGACCGGGAGAACAACCAAAAGCCCATCTCGCAGGAACCGACCGAGGAAAACAAAAACTCCGACACAGAGATCTCGGCAAGCATAACAACGCAGTCAGACGAAAATCAAAGCGTAAACGACCCATCTAATATACAGGACATTAAACGTCGACTGGAGAGAATAAAAATGGCGGCTAGAAACTAG

Transcript

rna-XM_032384780.2

CTCCGTCCATTTCAAATCAATGTGTTGTTCGTTGGTTTGGCCGCGAAAATAAATTACGAAAGCTGTAAAATAGTTCAGTAACAAAATAGAATTCTATGGTTTTCATGAGCAGGAATTTTACTCTACACAATGGCTGCTGATCTCGATCTGACAAAAATATCCTTAGACGATCGGCTAACGCACAAGGTTTGGAAAGCGAGGGTAAATGGCTACGAAGAACTTGTGCAGATATTTAAAAGGACAGATGATGAGACGAGTAGCGAATTCTCAAAGTACCTTGGGTTTATGAAGAAGATGGTTGTGGACAACAACGCCGTTGCACAAGACAAGGGGCTCGAAGCAGTTCTAGCTTTTCTTGAAGGAGCGGCCCCTTCAATAAGTGGAAGGGTTGCTGGTGACGTTATATGTGGATGTATCACCAAATGTCTCAATGCACGGacaaagacaaaagaaaaaggaattGAAATTATTCTTATGTATGTAGAAGTGGAAAAACAAGATATAGTCCAGGAAGAGTTATTAAAAGGTCTTGAGAATAAACAGCCCAAAATAGTAGCTGCATGCATTAATGTCTTCACGCAAATCATAAGTTTATTTGGTGGCAAGATTTTCCTTTTGAAGCCTATTGTTAAAGTCTTGCCCAAACTGTTTGACCACAGTGATAAATCTGTCCGTGAGGAGGCCAAACTTCTGGCAATAGAAATTTATCAATGGATCAGAGATGCATTGAGGCAGCAATTACAGAATATCAAACCTGTCCAGTTGAAAGAACTTGATGAAGAGTGGGGTAAGCTACCTCCAGCCCCCCCTGCACCCACTAGACTAACCAGGACGCAGCAGAAGAAGCTTGAAGAGCAGCAAGCACAGGGAATTTCTGATGCTCCTTATGCTGctgatgaagatgatgggGGAGCCGTGGCAGAAACAATAGACATCGATCCTTATGAAATGATGGATGCAGTTGAGATCCTGTCAAAGCTTCCTAAAGATTTCTATGAGAATTTGGAGGCGAAAAAATGGCAGACTAGAAAAGAAGCTTTAGAAGCACTTGAGAAGCTGGCCAGCAACCCCAAACTTGAGGGAGGGCAATACGGGGAACTTATGTCAGCCTTAAAAAAGATCATCAGCAAAGATGCCAATGTGATGGTGGTCACATTGGCTGCAAAGTGTGTGGCGTATCTAGCCACTGGCTTGCGTAAGAAGTTCTCTGCCTATTCTGCTATGATGGTATCAGCCATACTCGATAAGTTCAAGGAGAAGAAAACTACTGTTGTAACAGCTCTCAGAGATGCCATAGACGCTGTCTACCTAACAACTACCTTACCTGCAATGCAGGAAGACCTCTTGGCTGCCCTAGATAATAAGAACCCTAGCATCAAGGAAGAAACTGCCAAATTCTTGACTCGCACATTCTGCAAGAGTGTTCCTTCACAAGTGCCCAAAGCTTTCATGAAGCCAATTTGTGCAAATTTGGTCAAGAAAATGGATGACACCGCTGGTCCTGTGCGAGATGCGGTTGCTGAATCACTAGGAACCCTTACCAAGCTCATAGGAGAAAAAGCGATGACCCCTTACATTGACAAGCTTGATAAGCTCAAGGCTGACAAGGTGAAAGAGTTTGCAGACAAAGCCGAGATCAAGGCAAAACCTGGAtcaggtggtggtggtgggggtggaGAAGGTGCAAAGCCTGTTGCTGCTAGTAAACCTGCAGCTGCTGCACCGGCCAGTAAACCGGCTCCTGTCAAAAGGCCGGCTGCAAAGAAAGGTCCTCCAAAACCCTCAGGAGGGGCGTCAAAAGGGCCTCCGAAAAAGAAGCCTGCTGTTAAGGCCGGTGGCAAGAAGGCTGGTCCATCTGCCACCTTCAATGAAGTCAAAGAGCCTGAGTTGACAGATGAAGACGTTCAAGCTAAAGCTGCCGATCTTTTCCCTGCTGATCTGTTGGAGAAGCTAGCTCATACCAACTGGAAAGAGAGGATGGCGGGTATGGAGGAGCTCCACAAACTGGTGGAGAGCATGGATGACAAAACGATGGAGTGCCAAGTGCTTATCAGAGTGCTCGGCAAGAAACCGGGATGGAAAGACAACAACTTCCAGGTACTCAAGTCAAAGTTTCAGCTGTGTGGGATAATCGCTGGCAAGGGGAAAACATTCTCTAGTCGTAGTGCCGAGTACGCTATTCCAGGACTGGTAGAGAAAATTGGAGACATTAAGCTGAAAGACGCCGTCAAAGAGACGTTGATGATCATATCCGAAAAGCTAAACCTGGGTTATGTCAGTCTTAAgGTCTCACAAATTGCTGGGGGACAAAAGAACCCTAAGGTTATATCAGAGTCTCTTTCTTGGCTTGGCAGTGCTCTCAAGGACTTCGGATTCAAAATTGACCTAAAGCCACATATTCAATGCCTTAAGGATGCTCTGGCTAACACAAACCCTGCCGTGCGAACTGAAGCCATATCTCTCATTGGAGTGTTGCATATGTACGTTGGCCCAACAATAAGGGTGTTCTTTGAGGAAGAGAAGGCGGCTTTGCTGTCTCAAATCGATGATGAGATTGCTAAGGTAAAGGACGAAAAACCTCCTGCACCCACCAGAGGACTGAAGCCTGCAGCTGccgatggtgacgatgatggtgaggAAGGCGGGGACGATGCAGGCGGAGATGAGGATGATGGCAGCTCAGCAAATCTCGAGGATCTTATTCCTAGAAATGATATTAGTAATGAAATCAAACCTGACCTTATCGATATGCTGGCAGACAAGAACTGGAAAGTTAGAGGCGAAGGCCTGCAAAAGGTTCAGGAGATACTCGCTGCCGCCAAGTTCATCACTCCTGACCTTGGGGATTTGCCGTCTGCCTTGAAGGCACGTCTGGGAGACTCTAACAAGAATCTGGTAATTACAACCCTGAACATCTGCGGCACGATTGCTACGGCGATGGGAGCGAATGTGAAGAGACACTTTGGTACGCTTGGTCCCGCCATGTTCAGCACGCTAGCTGACGCAAAGCCTCACCTTCGCGCTGCCGGTATAACGGCACTCAACGCCTGGCACAAGGAGATAGGCATGGTGGCTTTCATTGAAGGAGAAATACTGTTTGGCGCACTTAGCACTGAGAACCCCTTCCTCAGGATCGAGGTTCTGGGTTGGCTCGAGGAGAAACTCCCTGGGGAACAAAAACTTCCCCCAGCCCTCTCCACTATATTGCCGCCCATGTACTCCTGCTTAGAGGACCGCAACGGGGATGTCAGGAAGAAGGCGCAAGCTGCCGTGCCAGCGGTCATGGCCCATCTTGGCTATGACGTCATGCTCAAACAAGCCAACAAACTGAAGCCTGCCTCCAAGCCTGTGGTGGTTGGCATACTGGAGAAGTTGCGAGGAACCGTCCCTGAGCCCGCGAAGAGCGCAACCAAGGCATCCAGTAAAAGTGCTTCCAGCAAAACCGAATCCGCCTCCACTACAAGCGCAACTCCCGCCGCGAATAGCGGTCCATCTAAACGCCCGAAATCTGCGGTGCAGTCTAGTAAACAGCCAGCCAAAACGAGCAAAAAGAAGGCGAACGTTGAAGAAGAGACTGGACCTCCACTTATTGCCAACAATGAAAAAGACAAGAGGATAAAAGATGAGAAAGATCTCAAgGTCATGAAGTGGAACTTCAGTACGCCCCGCGATGAGTTCATAGAACAGCTCAAGGAACAGATGAGCAAGTGCTTCAGTAAGACAATCATGAGCCAGCTCTTCCACCCGAACGACTTCAAACAGCAGCTGAAAGCCATCGCTACACTCCAACAGTGTGTGGAAGGCGAAGATGCGGAGTACAAGACTGAGGCTATGCAGTCCCTTGACATGATCCTCAAGTACCTGACCCTGAGGTTCTTCGACACCAACACCACGGTGCTCATCAAGTGTCTTGAATTCCTGGTCGCCCTGTTCACCATGCTGGCAGAGTCTGATTACCAGATGTTGGAGCACGAGGCGTCAAGCTTCATCCCCTACCTCGTGACCAAGGTGGGCGATCCTAAAGACGTTGTGCGCAAGATGATACGAAGCCTGTTTAAGTTGATCACCAAGGTTTACCCAGCCAGCAAGATGTTCAACTACGTGTCAGAGGGGATCAGCTCAAAGAACTCTAAGACAAGAATGGAGTGTCTGGAGGAGCTGGGCTGCCTTATCCAAGTGTATGGCATGAACGTGTGCCAGCCCACACCTCCTAAGGCTATCGCTGCCATCGCCTCTCAAATCGGTGACCGTGATAATGGAGTGCGAAACGCGGCACTGAATGCAGTGGTCGAGGCTTACTTCTTGGTTGGAGAAACCGTGTACAAATACGCTGGCAGGCTAAACGACAAGGACATGAGTCTTCTTGAGGAGCGCATCAAAAGGTCGGCCAAGAATCGTCCGTCCACTGCGGCTGCCCCAGAGGAACCTAAACCGGTTGCGAGACAGCGAGGTCCAACCGCCGACAACGATAAGAAACCGGCAAAAGCTCAGCCTGTAGCGAGACCCGCAACTGCGCCTGCCCTCAAGCGTGACGACAACATTAAGCGTGAGTTCGCTCTGGACTATGACACCATCGAGGGCGGCTCGTCAGAAGCGGATGTTTTCGTCCCAAATCTGGTCTCGCACGAGTCTGTCGAAGACTTGATCAGCGAGCCTATACAGCGACCGACTACCAAGACGCCTTCTTCGCCTCACCTTGGCGTATTTAGCCGGACTTCAGCACCCGCTGCCCTCAATTACGTCATCTCACAGATCGCCAGCAATGACATCATGGCTAGCACCCAGGCCCTCGTGCAACTCGAGGTCGTCCTTCGAAATAAGTCTGATGGCGCTATCGTCAAACACGTCGATCAgtTTTTAAACGCGGCTGCTCTTCAACTGAACATAATTCTGACAACACACATCGGCAACGAGGAAGTGGACGAGCAAGCAGTGACCCGTCTCCTTAACTGTCTCGTGGACGCCATCATGTCTCTATTCGCCAACCCGTCCCTTGCTGCCGAGGTGTCTCGCGACACCCTGAAGCACCTAGTCCAAAGCATGTTGACCACCGTGCTGGATGACAGACTGGTTAGCCTGAAGGAAGGGACGCAAATCATTCGCACTTTTAATGTGTTGATGGCAAAAATCATAGATCGAACCAATCCCACAGTTTGCATGGGCGCCCTGATCCGCTTGCTCCAGGACTCTGTCAAGATGCTCCAGGATCACGTCGGCAACTCGCTCAGCTCGCCTAAATTTGTGGAGTTAATAATGAAGGGCATGTGGAAGATGGTCCGTAGTCTTCCTAAGACTATCAAGGACGTGAATGCGGAGCTGGTTCTCCTGGACATCCACAAGTTCCTGGTAGCCCACCCCCCTCAGGTGTGGAGGTCGCGTGCTGACGACACTCCTCTTAGGACCATCCGCAGTGTCCTCCACTCACTCGCCAAACTGAAGGGCATCGACATCCTGGGTTGCACGAATCTCATCGAAGACGCTGAGCAAAGCGAGGTGTACGGATACCTGCACAAGGCACTCAAGACAGGCTACAAGCCGCCGTCCACAAGCGACCCGATCAACAACAGTACGGAGGAGAGCAAGAACGAGAAGAACGGGCATGCCGTGCCGCCCCCGGACTTGCTGGAGGGTGTACAGGGATCCAGGGGTACTTCAGTAACGAAGCTGAACGAAAAGCTCGCCGAGATATTCAGAATGATTGCGTCAAAAGAAAACACCAGAGAGGGTCTAGCTCAACTGTACGATCTCAAGCTACGGTACCCACAGGCGGACACCGACCCCTTCCTCCAAAAGACCTCGCCCTTCTTCCGTAACTACATCGAGAGAGGGCTGCGAAATATCGAGATGGAACGCAAAGGGAAGAAGGGTGCGAACGAAAACACGTCTTCTAGCAGCACGGTGATCAGTAATCCACCAGAGGTCCCCCAGCAGGCCGGCGAGGGTCCCGCGGCATACATGGACAGACTGCGCATACTCAGAATGAAATCGGGCCTCGGCAATAACACCAACATGGACGCCACCAAGGACCGGGAGAACAACCAAAAGCCCATCTCGCAGGAACCGACCGAGGAAAACAAAAACTCCGACACAGAGATCTCGGCAAGCATAACAACGCAGTCAGACGAAAATCAAAGCGTAAACGACCCATCTAATATACAGGACATTAAACGTCGACTGGAGAGAATAAAAATGGCGGCTAGAAACTAGTGGCGGGAACTTGGTTCGTCACTTTGTATATAGCACCGTCCGGGCGATATTGTACAGAGAGACTAGCCCGGATTCGTGGGCCGCCTGTGGCATGAAAGCttcgatcacgtgacttttcaATTGTAGTTGAGATTTGAATACTGAAGTTATGAAGAACCTTCGAGCATCAAGAAATTCTGCTGATTTCTAACGCTGAACGATGTTAGTCTGAACAGGCTGCTTGCAGAGATTTTGTAAAGAAAATGTTATAGTTGTCAAAAGCTATGTTGCGTTTAAAAAATGTTCGCAACGGTGTCCTGATAAGGGTTTAGTGTGTAAACCTACTAGAATTTTAGtgtacaaaatataaaaattccAGTTTACA

Protein

XP_032240671.2

MAADLDLTKISLDDRLTHKVWKARVNGYEELVQIFKRTDDETSSEFSKYLGFMKKMVVDNNAVAQDKGLEAVLAFLEGAAPSISGRVAGDVICGCITKCLNARTKTKEKGIEIILMYVEVEKQDIVQEELLKGLENKQPKIVAACINVFTQIISLFGGKIFLLKPIVKVLPKLFDHSDKSVREEAKLLAIEIYQWIRDALRQQLQNIKPVQLKELDEEWGKLPPAPPAPTRLTRTQQKKLEEQQAQGISDAPYAADEDDGGAVAETIDIDPYEMMDAVEILSKLPKDFYENLEAKKWQTRKEALEALEKLASNPKLEGGQYGELMSALKKIISKDANVMVVTLAAKCVAYLATGLRKKFSAYSAMMVSAILDKFKEKKTTVVTALRDAIDAVYLTTTLPAMQEDLLAALDNKNPSIKEETAKFLTRTFCKSVPSQVPKAFMKPICANLVKKMDDTAGPVRDAVAESLGTLTKLIGEKAMTPYIDKLDKLKADKVKEFADKAEIKAKPGSGGGGGGGEGAKPVAASKPAAAAPASKPAPVKRPAAKKGPPKPSGGASKGPPKKKPAVKAGGKKAGPSATFNEVKEPELTDEDVQAKAADLFPADLLEKLAHTNWKERMAGMEELHKLVESMDDKTMECQVLIRVLGKKPGWKDNNFQVLKSKFQLCGIIAGKGKTFSSRSAEYAIPGLVEKIGDIKLKDAVKETLMIISEKLNLGYVSLKVSQIAGGQKNPKVISESLSWLGSALKDFGFKIDLKPHIQCLKDALANTNPAVRTEAISLIGVLHMYVGPTIRVFFEEEKAALLSQIDDEIAKVKDEKPPAPTRGLKPAAADGDDDGEEGGDDAGGDEDDGSSANLEDLIPRNDISNEIKPDLIDMLADKNWKVRGEGLQKVQEILAAAKFITPDLGDLPSALKARLGDSNKNLVITTLNICGTIATAMGANVKRHFGTLGPAMFSTLADAKPHLRAAGITALNAWHKEIGMVAFIEGEILFGALSTENPFLRIEVLGWLEEKLPGEQKLPPALSTILPPMYSCLEDRNGDVRKKAQAAVPAVMAHLGYDVMLKQANKLKPASKPVVVGILEKLRGTVPEPAKSATKASSKSASSKTESASTTSATPAANSGPSKRPKSAVQSSKQPAKTSKKKANVEEETGPPLIANNEKDKRIKDEKDLKVMKWNFSTPRDEFIEQLKEQMSKCFSKTIMSQLFHPNDFKQQLKAIATLQQCVEGEDAEYKTEAMQSLDMILKYLTLRFFDTNTTVLIKCLEFLVALFTMLAESDYQMLEHEASSFIPYLVTKVGDPKDVVRKMIRSLFKLITKVYPASKMFNYVSEGISSKNSKTRMECLEELGCLIQVYGMNVCQPTPPKAIAAIASQIGDRDNGVRNAALNAVVEAYFLVGETVYKYAGRLNDKDMSLLEERIKRSAKNRPSTAAAPEEPKPVARQRGPTADNDKKPAKAQPVARPATAPALKRDDNIKREFALDYDTIEGGSSEADVFVPNLVSHESVEDLISEPIQRPTTKTPSSPHLGVFSRTSAPAALNYVISQIASNDIMASTQALVQLEVVLRNKSDGAIVKHVDQFLNAAALQLNIILTTHIGNEEVDEQAVTRLLNCLVDAIMSLFANPSLAAEVSRDTLKHLVQSMLTTVLDDRLVSLKEGTQIIRTFNVLMAKIIDRTNPTVCMGALIRLLQDSVKMLQDHVGNSLSSPKFVELIMKGMWKMVRSLPKTIKDVNAELVLLDIHKFLVAHPPQVWRSRADDTPLRTIRSVLHSLAKLKGIDILGCTNLIEDAEQSEVYGYLHKALKTGYKPPSTSDPINNSTEESKNEKNGHAVPPPDLLEGVQGSRGTSVTKLNEKLAEIFRMIASKENTREGLAQLYDLKLRYPQADTDPFLQKTSPFFRNYIERGLRNIEMERKGKKGANENTSSSSTVISNPPEVPQQAGEGPAAYMDRLRILRMKSGLGNNTNMDATKDRENNQKPISQEPTEENKNSDTEISASITTQSDENQSVNDPSNIQDIKRRLERIKMAARN

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14008	Cytoskeleton-associated protein 5 OS=Homo sapiens OX=9606 GN=CKAP5 PE=1 SV=3
A2AGT5	Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1
Q9PT63	Cytoskeleton-associated protein 5-A OS=Xenopus laevis OX=8355 GN=ckap5-a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002782 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21041 all species →	XMAP215_CLASP_TOG	XMAP215/Dis1/CLASP, TOG domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021133 all species →	Repeat	HEAT, type 2	Interproscan
IPR048491 all species →	Domain	XMAP215/Dis1/CLASP, TOG domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR045110 all species →	Family	XMAP215	Interproscan
IPR034085 all species →	Domain	TOG domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12609 all species →	MICROTUBULE ASSOCIATED PROTEIN XMAP215	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007051 all species →	Biological Process	spindle organization	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0030951 all species →	Biological Process	establishment or maintenance of microtubule cytoskeleton polarity	Interproscan
GO:0035371 all species →	Cellular Component	microtubule plus-end	Interproscan
GO:0046785 all species →	Biological Process	microtubule polymerization	Interproscan
GO:0051010 all species →	Molecular Function	microtubule plus-end binding	Interproscan
GO:0051298 all species →	Biological Process	centrosome duplication	Interproscan
GO:0061863 all species →	Molecular Function	microtubule plus end polymerase	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16803	CKAP5; cytoskeleton-associated protein 5	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032240671.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

43TPM > 0

16Conditions

16.4Max TPM

8.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	13.99	15.74
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	9.04	12.36
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	5.85	7.05
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	7.40	9.54
whole 6 week old aboral regenerate · regenerate uncut	3	3	6.57	7.46
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	4.96	7.55
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	13.24	14.11
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	9.27	10.48
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	5.83	9.58
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	9.81	11.83
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	7.28	9.30
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	14.34	16.40
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	12.27	13.71
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	8.99	14.15
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	5.55	8.41
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	5.37	8.27

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	15.74
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	14.16
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	12.07
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	12.36
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	8.05
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.71
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.05
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.96
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.56
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.54
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.36
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.29
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.46
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.43
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.83
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.55
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.34
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	14.11
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	13.97
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.64
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	10.48
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	10.05
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.27
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.58
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	7.89
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.83
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.29
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.33
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	9.30
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.50
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.02
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.40
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	13.46
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	13.15
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.71
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	12.00
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	11.10
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	14.15
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	12.82
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.41
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.23
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	8.27
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	7.84
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.