Gene detail

Detailed information of XP_032240954.1 in Nematostella vectensis

Genomic Location: NC_064042.1:7879951...7890611
NR annotation: XP_032240954.1, protein O-mannosyl-transferase TMTC4 isoform X3 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515480

ATGCCTGTTAGGACCAGGGCTGGGAATTCTAGACGAAGGGTACCAAAGGAGCTAAACGGAGTTAGCCATTCTGCAAATGAGTCGCCTCAACATCACATAGACGACAACAACAATCTAAACAAACTCCTTCCGCTACCAGAACTATCCCGCCTGCACGCTTCATTAACCATCGCGATCGTCTCTCTACTTTGCTACTGGAATTCTTGTAATGGAGACTTTGTCTTTGACGATTCAGAAGCAATTTTAAATAACAAAGACCTTCGTCCCGAGGCACCTATATGGACGTTGTTTATTCATGATTTCTGGGGTGGTAAGCTTGATTCAAACGAAAGCCACAAGAGCTACCGTCCATTAACAGTGCTAACTTTCAGACTAAATTACTGGCTCGCCAATGGCTACCACCCTTGGGGTTTTCATTTTGTCAATGTGGTATTGCACGCCGTTGTTTCTATGTTATCTTTACGGATTTATGCGGTGTTTTTCGAAGATCGTGTTCGAATGAAGACCGGTCAAGTTTCGCAAGCAAGTTTTCTGTGTTCTCTGATATTTGCGGTGCACCCAGTTCATACGGAAAGCGTGGCTGGTGTAGTTGGCCGTGCTGATCTCTTGTGTGCTTTGTTCTTCTTTCTATCTTTTCTATGCTATGTGAAATGTTGTTCTGCTTCTGCAGATGAGCCCATTCAGAGTTCTTTAAACTACTTGTTGCTAAGTGTTGTACTCTGCGCTGTTGCTATGCTGTGTAAGGAACAAGGGATCACTGCTCTGGGAATTTGCTGTGCATACGACCTTATCATCGTCTGCAAGGTGGATATAGTTAGAGTACTCCAGAATGCCTTCAGGAAAAAAAAGCCACTGCCAACTGAGCAAGAAGATATATCTTGGATGAGAGGGCTGTTCTACCGTCAGTTTGCCCTGGTGTTGACTGGTGTCTCGCTACTTATTGCTCGTTGGCAAATAATGGGTTCTGCACCACCTCGATTCCAAGTCTCTGACAATCCTGCGTCGTTCGAGAAGAGTTTGCTTTCTAGGTTCATCAACTACAACTATATCTACTCGATAAACATCTGGCTCCTTGTTCACCCGTGGTGGCTGTGTTTTGATTGGTCCATGGGCTGCATCCCACTGATACAGAGCGCTAAGGACGTCAGGATTCTCGCAGTGCTTGCCATGTGGGTGTCGCTGGGCGGGCTGATGCTCTACTGCTTTTTTGGGAAAGATCTTTATTTTAGAAGGCTGCTAACAATTGGTCTGGCGTTTCTAATAGTCCCGTTTCTTCCCGCGAGTAATTTCTTTTTTCGGGTCGGGTTTGTGGTCGCAGAGCGCGTACTATACTTGTCCAGTGTTGGGAGCTGTCTCATTGTGGTATTAGGCGCGGTGGCCATCAGCCGCAAACCTCCAATGAGAAAGGCTCTGTCAGTAGCCGTCAGTGCTGTCCTGTTGTTTTACTCGATCAGGACTGTTCAGAGAACATCAGAATGGCTGACTGAAGAGAAGTTATTTACTAGCGGTCAAGCAGTTTGTCCTTTGAATGCAAAGGTTCATTACAATATCGGCAAAGTACGCTCGACTCAACAACGAGATGAAGAAGCCCTTGCTTACTACAGAGAAGCAGTCAGACTCAACCCAACATACAGCGACGCGTTGAATAACTTGGGGAACTTGCTAAAGGAGAAAGGTGAAATATCTGAAGCTGAGAAGTTGTTGGAGAGAGCTGTTGATTCGAGCAAAGCTTTCGCCGCTGGTTGGATGAATCTAGGGACTGTGAAAGCCGCATTGAACAAAATGCAGGAAGCAGAGACGTGTTATAAAAATGCCATTCGCTATAGAAAGAAGTATCCTGATGCGTTCTTCAACCTCGGAAACCTGTATATTGACTGGAACAGGGATGCGGAGGCGGTTGCAGCGTTTAGAAAAGCAGTGAAGCTGAAGAGCGACCACGTTGGCGCATGGATGAATCACATATTACTGCTGGATAAGACAGATAAAAGAACTGAAGGAATAGAGTTGGCATACGAGGCTTTGAAGCACATCCCGGATGAATCCTCGATACATTTTAACCTGGGAAATATGCTGGGGCAGGAAAAGAGATTCAAGGAGGCCGAAAAGCACTTCCTTAGAGCGCTGGAGTTAAATCCTGTACAGCCTGAAATTCGTGGAAACTTAGGTGTTTTATATCATCGCTGGGGCAAGCTGAACGAAGCAGAGAAGTGTTATATGGAAGCCCTAGCTGCTGATCCTCAAAGCGCTAACATACGCGAAAATCTCGAAAAACTCAAAAGAACTAAACGCAACATAAGTAATGGGTTTTGA

Transcript

rna-XM_032385063.2

GAGGGAAGTATTGGTTCATCATTTTCGCGCACAGTTTGAAAATGGCGGACGTGTCTTATATCTGAGAGTCAGTGGAACAAAAAAACTCCCGCAAATTGTGAGAAATGCTTTGATCTGCTTAATATTGCTTGGACAAGATGCCTGTTAGGACCAGGGCTGGGAATTCTAGACGAAGGGTACCAAAGGAGCTAAACGGAGTTAGCCATTCTGCAAATGAGTCGCCTCAACATCACATAGACGACAACAACAATCTAAACAAACTCCTTCCGCTACCAGAACTATCCCGCCTGCACGCTTCATTAACCATCGCGATCGTCTCTCTACTTTGCTACTGGAATTCTTGTAATGGAGACTTTGTCTTTGACGATTCAGAAGCAATTTTAAATAACAAAGACCTTCGTCCCGAGGCACCTATATGGACGTTGTTTATTCATGATTTCTGGGGTGGTAAGCTTGATTCAAACGAAAGCCACAAGAGCTACCGTCCATTAACAGTGCTAACTTTCAGACTAAATTACTGGCTCGCCAATGGCTACCACCCTTGGGGTTTTCATTTTGTCAATGTGGTATTGCACGCCGTTGTTTCTATGTTATCTTTACGGATTTATGCGGTGTTTTTCGAAGATCGTGTTCGAATGAAGACCGGTCAAGTTTCGCAAGCAAGTTTTCTGTGTTCTCTGATATTTGCGGTGCACCCAGTTCATACGGAAAGCGTGGCTGGTGTAGTTGGCCGTGCTGATCTCTTGTGTGCTTTGTTCTTCTTTCTATCTTTTCTATGCTATGTGAAATGTTGTTCTGCTTCTGCAGATGAGCCCATTCAGAGTTCTTTAAACTACTTGTTGCTAAGTGTTGTACTCTGCGCTGTTGCTATGCTGTGTAAGGAACAAGGGATCACTGCTCTGGGAATTTGCTGTGCATACGACCTTATCATCGTCTGCAAGGTGGATATAGTTAGAGTACTCCAGAATGCCTTCAGGAAAAAAAAGCCACTGCCAACTGAGCAAGAAGATATATCTTGGATGAGAGGGCTGTTCTACCGTCAGTTTGCCCTGGTGTTGACTGGTGTCTCGCTACTTATTGCTCGTTGGCAAATAATGGGTTCTGCACCACCTCGATTCCAAGTCTCTGACAATCCTGCGTCGTTCGAGAAGAGTTTGCTTTCTAGGTTCATCAACTACAACTATATCTACTCGATAAACATCTGGCTCCTTGTTCACCCGTGGTGGCTGTGTTTTGATTGGTCCATGGGCTGCATCCCACTGATACAGAGCGCTAAGGACGTCAGGATTCTCGCAGTGCTTGCCATGTGGGTGTCGCTGGGCGGGCTGATGCTCTACTGCTTTTTTGGGAAAGATCTTTATTTTAGAAGGCTGCTAACAATTGGTCTGGCGTTTCTAATAGTCCCGTTTCTTCCCGCGAGTAATTTCTTTTTTCGGGTCGGGTTTGTGGTCGCAGAGCGCGTACTATACTTGTCCAGTGTTGGGAGCTGTCTCATTGTGGTATTAGGCGCGGTGGCCATCAGCCGCAAACCTCCAATGAGAAAGGCTCTGTCAGTAGCCGTCAGTGCTGTCCTGTTGTTTTACTCGATCAGGACTGTTCAGAGAACATCAGAATGGCTGACTGAAGAGAAGTTATTTACTAGCGGTCAAGCAGTTTGTCCTTTGAATGCAAAGGTTCATTACAATATCGGCAAAGTACGCTCGACTCAACAACGAGATGAAGAAGCCCTTGCTTACTACAGAGAAGCAGTCAGACTCAACCCAACATACAGCGACGCGTTGAATAACTTGGGGAACTTGCTAAAGGAGAAAGGTGAAATATCTGAAGCTGAGAAGTTGTTGGAGAGAGCTGTTGATTCGAgCAAAGCTTTCGCCGCTGGTTGGATGAATCTAGGGACTGTGAAAGCCGCATTGAACAAAATGCAGGAAGCAGAGACGTGTTATAAAAATGCCATTCGCTATAGAAAGAAGTATCCTGATGCGTTCTTCAACCTCGGAAACCTGTATATTGACTGGAACAGGGATGCGGAGGCGGTTGCAGCGTTTAGAAAAGCAGTGAAGCTGAAGAGCGACCACGTTGGCGCATGGATGAATCACATATTACTGCTGGATAAGACAGATAAAAGAACTGAAGGAATAGAGTTGGCATACGAGGCTTTGAAGCACATCCCGGATGAATCCTCGATACATTTTAACCTGGGAAATATGCTGGGGCAGGAAAAGAGATTCAAGGAGGCCGAAAAGCACTTCCTTAGAGCGCTGGAGTTAAATCCTGTACAGCCTGAAATTCGTGGAAACTTAGgtgttTTATATCATCGCTGGGGCAAGCTGAACGAAGCAGAGAAGTGTTATATGGAAGCCCTAGCTGCTGATCCTCAAAGCGCTAACATACGCGAAAATCTCGAAAAACTCAAAAGAACTAAACGCAACATAAGTAATGGGTTTTGACAAGGTTCTGAGGTATAAGAGATATCTGGATCTAACGCATCCCGCGCAAAGAATCAGCTTGAGTGAGTTATCCTTTGAACAAAGGGACCTAACGAGCTAACGGTGGGTGTTTCGATGGGTGTGATACTACGCGATCAGATCACGGGTGTGTCAAAAGCGTCATATATGGAAGTGTCCGTACAATCCCGTGGCCAAGTTAGAAAAAGGTATCACCGAGGCAAAAACACTATCCCTATAAAATATGATCAACAGGTCAAACAGAAAATGCCATGCACGAAAATGTAACTAATACATCAGTTATATTTGGGTGTTATGCCTGATGCAAATGACTCAATTCGCCTCATGATAGCTGTAAGCGATATGTAAGGGTGCAATAAGGGCTATTTCTGACAAGCGGGGCGATCGAGCAAACTATGCCTTTTTTgcgctaagaaatcacgtgactgtttgttTTTCACGTGACCAGTCGTTTTCTGGTGTGACTGGCGCAGTAATTTCTGAATTTTTGTTTGtatgattattttgttttgaatttgccaccaaGAAAGGTCATgcgatctcttagcgcaagtccccttcTCTTCTCGGCTAACCAGAGCTCGTAATTTACGAGCGTTGTTGTATAATTATGTGTCGTAATCAGCTTATCACAGAGTAAGAGATAAGGCTAAAGGAATAGAACAGGGCTGTCTGACAGCAGTGAGAATATAACAGTGTGATAAATAATTGAATAACGTGTAACGAGAATGAGGTTTTAATTAAGTTTGGTAATAAATTTAGCTAACAAATTGTAAAATATCATAAAACGTTAAGATATCATTCATCTGTTATATTACGAGAAGAAAAGTAAACCACAATCTCAAATTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5T4D3	Protein O-mannosyl-transferase TMTC4 OS=Homo sapiens OX=9606 GN=TMTC4 PE=1 SV=2
Q8BG19	Protein O-mannosyl-transferase TMTC4 OS=Mus musculus OX=10090 GN=Tmtc4 PE=2 SV=1
Q3UV71	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000831 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13414 all species →	TPR_11	TPR repeat	Repeat	Interproscan
PF14559 all species →	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF08409 all species →	TMTC_DUF1736	Protein O-mannosyl-transferase TMTC, DUF1736	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR052346 all species →	Family	Protein O-mannosyl-transferase TMTC	Interproscan
IPR013618 all species →	Domain	Protein O-mannosyl-transferase TMTC, DUF1736	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44227 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000030 all species →	Molecular Function	mannosyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0035269 all species →	Biological Process	protein O-linked mannosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23424	TMTC; protein O-mannosyl-transferase	EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032240954.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

41TPM > 0

16Conditions

17.0Max TPM

7.1Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	7.11	9.18
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	8.06	11.16
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	10.73	11.40
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	9.01	9.93
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.88	8.98
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	8.20	16.12
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	5.92	9.48
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	7.33	7.68
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	3.73	6.29
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	6.59	8.96
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	6.20	6.39
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	11.06	17.00
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	8.59	9.76
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	5.25	8.57
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	5.65	9.35
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.36	7.08

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.18
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.51
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.64
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.16
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.87
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.14
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.40
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.05
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.74
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.93
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.02
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.06
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.98
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.94
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.73
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	16.12
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.48
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	9.48
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	8.27
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.68
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.35
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.97
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.29
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.88
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.96
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.64
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.19
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.39
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.29
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	5.92
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	17.00
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.09
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.09
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	9.76
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	8.32
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.68
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.57
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	7.18
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.35
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.61
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	7.08
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.