Gene detail

Detailed information of XP_032241614.2 in Nematostella vectensis

Genomic Location: NC_064034.1:13722377...13743037
NR annotation: XP_032241614.2, early endosome antigen 1 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC116620132

ATGTTTAAACGCTGGAGAAAGAAGGACAATGCAGAGAAATCGGACGATGAAAAGAATACAAGTCGTGCAGACAGAACCGTTACCGAGGAAACATCGGGTTTTATTTGTCCAATTTGCATGCTTGCATTTGAGTCCCAGGACGCCCTTCAGATCCATTTTGTTATGGCTCACGCTGAGGAAGAGGCTATGGCTACATCTTTAAGTGATTTTATTTGTCCAATGTGTAACAAAAGCTTCTTTGCTGCTGAAGAATTGCAGTCCCACTTTGATCTAGAGCACAGTGCAAGTCAGGATTTTATTCCAGAAACACATGCTGAACAGCTTGAAGCTGGAAGTAAACTACCAGAATCAAACGAAGGCTCTCTTATCTCATTTGATGATGATAGCTCTCCTCGTAAAGAATCTGAAGTCTCTCGTCTTTCTCTTCATCTTAAAGAGCTAGAGGATAAAACTCAAGAAATTCTTAATTTACAGCAAGAGCTTAATGATGTAAATGCTTCTCTGAAGGAGGAAAGGTGGTACAGTACTGCTCTCAAAGATGAAGTGGAAAAACTCAACAACCAGAACAAAGCATTGCAAGATCAGCAAAAACAAGTTGAACAGGAAAAGGAACAAATGCGGAAAGATTTTGAGAAGAGGTTGATTGAAGAAAAAGAAAGAAATGTTCAAGGAACCATGGCAGAGTTTGGTCAACTGAAAGTGGAACTAGCACAGTCCCTTGAGGCACACAGTAGTAGCCAGAGTGAGCACTTGACACTTGCACAGCGAGTTGCACAACTGGATTCTGAGAATGATAGTCTGAAATCAAAGCTTGAAGAAGAACGATCCAAAAGAGAATCTGCTGAAGAGAAGATTGTTGGATTAACGGCTGAGTTGGACAAAATAGGCCAACTTGTTGAAAATCTTGAACACCAGATATCCCAAAGGCCCTCTGGAAATGATGTGGTGGCTCTTGAAAACAAGGTTTCCACTTTGGAACAGAAGCTGTCTACCCTACAACTGGAAAAGGATGAGGAACAGAAAGAACTACAGACCAAGCACAATGCCGCCTTGCAGGACTTAAACAATTTGCAGATGAAAATAAAAGAGACAGAAGTAGAGAAGAGTTCAAAAGTTGAACAGGTCCAAAGGTTGGCATTCCTTCAGACGGCACTGTCTGCGGCGACAGACAACAGAAGGCAAGTACAGGAGCAGCTCAAGGAGAAGCAGCAACTTGTCATAAGCTTGCAGCATGATCTCAACCAGGCGAATGTACTTGTTAAGGAGAAGAACAGTTTTGTTGAATATCTACAAAAACAGCATGAAGAGTTGAAAGGGAAGCTGAACAAAGAAGTATCATCCAAAGAAGCTGAAAGCCAGCAGGTCCGTAATCTGCAGAACCTGCTTGAGGAGACCAAGCGACAGCTTGAAAACAGAGAAAAAACAGTTCTTGAATTAGAGTCAGGCTTAAAGGAGAAGAAAGAAGATGTGTCAAGGCTTGAGCTTGAGCGTGCTGACCTGATGGCGAAGATCGAGGCAGGCGAGGGCACAGAGACTGCAATACATCAATTGAAGAAGGAGAATGAAAGCCTTCAAACAAGGCTCAGTGATGCTCAAGCGCTGAGCCAAAAACAGCTCAAGGAGAGCTCATCCAGACTGGAGGAGATGCACCAACAACACAACAAGGTAGAGGAAGAACTGGCTAAGTCAAAGGAACAGTGCTCCAGACTAGAGACGATGCTTCAGGAGGCAAAAGGGCAGATCGAAGAGATGACCCAGAAAAATGCAAGAATAAAAAGCAGTTTGAAGGAAAAGTCTGATGCTCTAGTTGCCCTGGAAGCCGCTAAATCAGCAGAAAATAACGTCTTGAGTGAGCAGGTCACTTCACTTCAAGACTCACTGCAGCATAGACTGGTAGAGTTGAGTGCTTTACAGCAACAACACGCACGGGCCAAGGAGGATCTGAGTGCAATTCGTGACTTGCAAGCGCAGACGGAGACCAAGGTCCAGTCAGCAACCTTGGAGCTGGAAAACAAGAACAAAAACTGCACAAAACTTGAACAGGAACTGCAACAAAAGGCATCCGCTATTACAAATCTTGAACAAAAGAGTCACAATGAAAAGTCATCCTTGGAGAAACAGCTCTACAATGCAAAAGCTGCTTTAGAAGGCAAAGAAGCACAACTATCTACCTTTCAGAAGGACTTGGAAACATTACGAGAGGAGAGCTCAAACAAGGTCAAGGAGCTGGAATCTGCCATAAGTCAATTGAGATCTGATCTATCCACGGCAAACACTCGACTTAAGGAAAAGGAAGATATCATAAGCAGCACTCGAACCGAATTGGGAAGCACACGGGAGGAGAAAGCAGACCTTGACAGACAACTGGCTCTAGCTAACCAAAGTTTACAAGAAAAGAATCAAGAACTTGAAAGAAGTTCCAAGGAATTTGAGGACAATAAGCTTCAAATGTCCAACATGGAAGCTGCCGGAAAACAAGAGAGATCAGAACTCATGACAACGCTAAAGAACGTGAAAGAAAAGCTAGAAGAATCAAAGAATTTGTATGCCAAGAAACTCGAGAGTGAGAAGGAACTACAAGACAAGATCAATGAATTGAATACAGAAATCTCAAGCCTTCAGGAAGGAATGCAAGAGCTGGGAACGGCTCATCAGAACAAGGTCGTGGCGATGGAAAACGAGTTTAGTACAAAGATCGCAGAAAAGGAAATAAGTTTGGATGAGATGCAAAAATGTCTTGAAGAGAAGGAAGATAAACTAACGCAACTACAGAGGCGTGTGGAGGTATTGGAGGCTGAATTAAAGAAAGAATGCGAGAGCTGTAAGAATTATGAATCGCAATTATGTCGGACGCAAACCCAGTTAAAGGAGGAACAAACCAAACTCTGTAATTTGGAGTCTCAGTTGCTGGTTCTCAACTCTGAACTAAGAGATTTTCAAGAGCAGATCAGCTCGTCAGAAGAGGAGCTGTCTCGCGTGAGATTAAACGCTCAGGAAACTGAAGCGAACCTTCGGCAGATGGTTGAGCAACTAAATGAGGTTAAGAATACTCTTGAGACTCAAGTTATGAACATTGAGAATGAGCTGCAGTCAACGAGAGTCACCCTTGAGAGCGTGACATCTGACAAGGACGCATTAGAAACAGAGTTGAAAAGCCAAAAGGAAGCATTTGCCTCGATGAAGGGCTCATTAGAAGATCGTATCAACGAACTGGTTGGACAAGCTGAGGCCGACAGACAGCAAAAAGAAAAAGAACTCGAGGAAGCGAGTGACAAACTCCAGCTTCTTATAACGCAAAAGTTGGCTATTGAGAATCAGTTATCAAGTACTGAGAAAGACCTGAACAAGACCCGTGAAGAGTTCGAAGAGAGCAAAGAAGTTGCCAAACGTGTGCAGATGTTACTTAAAGAAGAGACGGCAGCCATGCAAACTAAACTGACCAATGAGACCCGTGATAAAGAAGAACAAGCCCAGAAGATGGAGGAGATGGAAACGAGGCTTAACATTCAGATCGCTTCACTGACAGAGAATATGAGTGCTGCGCGCGCAGAGGCCGAGGCCAGTGAACAGAAAGCCACTGAGATCGCCGCCAAACACAAGGAAGAAATGAAAAATAGTGACTCACTGAGAGTAGAAATTGCAGTGTTAGAAGCAACAGTGCAAAGTAATCTAGATGAAAGAAGAAAGCTGCTAGAAAGGTGTGTAGCCGACGAGGAATGCATTGAGAAGCTCAGAAAAGAGCAGGCGTTGTTAAAAAAGCAACTAGAAGACTCAAAGGCAGCAATGATGGAATTGACACAAGAGAACCAAAACCTTCAGGTATTGAATAACCAAATGAGCACACGGCGATGGGAGGAAGATAGTGACGTCACAAACTGTAATAGTTGTGACAAGGTTTTCTCAATAACCCTAAGAAAGCACCATTGCCGGAACTGTGGACTTATCTTTTGCTCAGACTGTACCTCTAAAACAGTAACTCTTGCAGCCAGTAAGAAGCCGGCTCGAGTGTGCGAGACTTGTTACCATGAAGTGACAACAGGTTCCATAAAGAAATACCAGCTTCAACCAAACCAAGGTTTTAGCTAG

Transcript

rna-XM_032385723.2

GGCTGAGAAACCTCGCCTTGTGTTGGACGGAGGGGCTATTATTTTTCTCTGTTCACActtttattttgattgccaCTCTAATTTGCCgcaattattgttttattctGATCACTTATATAATCTACTTCAGAACTCTTTTTTTCCACGATGTTTAAACGCTGGAGAAAGAAGGACAATGCAGAGAAATCGGACGATGAAAAGAATACAAGTCGTGCAGACAGAACCGTTACCGAGGAAACATCGGGTTTTATTTGTCCAATTTGCATGCTTGCATTTGAGTCCCAGGACGCCCTTCAGATCCATTTTGTTATGGCTCACGCTGAGGAAGAGGCTATGGCTACATCTTTAAGTGATTTTATTTGTCCAATGTGTAACAAAAGCTTCTTTGCTGCTGAAGAATTGCAGTCCCACTTTGATCTAGAGCACAGTGCAAGTCAGGATTTTATTCCAGAAACACATGCTGAACAGCTTGAAGCTGGAAGTAAACTACCAGAATCAAACGAAGGCTCTCTTATCTCATTTGATGATGATAGCTCTCCTCGTAAAGAATCTGAAGTCTCTCGTCTTTCTCTTCATCTTAAAGAGCTAGAGGATAAAACTCAAGAAATTCTTAATTTACAGCAAGAGCTTAATGATGTAAATGCTTCTCTGAAGGAGGAAAGGTGGTACAGTACTGCTCTCAAAGATGAAGTGGAAAAACTCAACAACCAGAACAAAGCATTGCAAGATCAGCAAAAACAAGTTGAACAGgaaAAGGAACAAATGCGGAAAGATTTTGAGAAGAGGTTGattgaagaaaaagaaagaaatgttCAAGGAACCATGGCAGAGTTTGGTCAACTGAAAGTGGAACTAGCACAGTCCCTTGAGGCACACAGTAGTAGCCAGAGTGAGCACTTGACACTTGCACAGCGAGTTGCACAACTGGATTCTGAGAATGATAGTCTGAAATCAAAGCTTGAAGAAGAACGATCCAAAAGAGAATCTGCTGAAGAGAAGATTGTTGGATTAACGGCTGAGTTGGACAAAATAGGCCAACTTGTTGAAAATCTTGAACACCAGATATCCCAAAGGCCCTCTGGAAATGATGTGGTGGCTCTTGAAAACAAGGTTTCCACTTTGGAACAGAAGCTGTCTACCCTACAACTGGAAAAGGATGAGGAACAGAAAGAACTACAGACCAAGCACAATGCCGCCTTGCAGGACTTAAACAATTTGCAgatgaaaataaaagagaCAGAAGTAGAGAAGAGTTCAAAAGTTGAACAGGTCCAAAGGTTGGCATTCCTTCAGACGGCACTGTCTGCGGCGACAGACAACAGAAGGCAAGTACAGGAGCAGCTCAAGGAGAAGCAGCAACTTGTCATAAGCTTGCAGCATGATCTCAACCAGGCGAATGTACTTGTTAAGGAGAAGAACAGTTTTGTTGAATATCTACAAAAACAGCATGAAGAGTTGAAAGGGAAGCTGAACAAAGAAGTATCATCCAAAGAAGCTGAAAGCCAGCAGGTCCGTAATCTGCAGAACCTGCTTGAGGAGACCAAGCGACAGCTTGAAAACAGAGAAAAAACAGTTCTTGAATTAGAGTCAGGCTTAAAGGAGAAGAAAGAAGATGTGTCAAGGCTTGAGCTTGAGCGTGCTGACCTGATGGCGAAGATCGAGGCAGGCGAGGGCACAGAGACTGCAATACATCAATTGAAGAAGGAGAATGAAAGCCTTCAAACAAGGCTCAGTGATGCTCAAGCGCTGAGCCAAAAACAGCTCAAGGAGAGCTCATCCAGACTGGAGGAGATGCACCAACAACACAACAAGGTAGAGGAAGAACTGGCTAAGTCAAAGGAACAGTGCTCCAGACTAGAGACGATGCTTCAGGAGGCAAAAGGGCAGATCGAAGAGATGACCCAGAAAAATGCAAGAATAAAAAGCAGTTTGAAGGAAAAGTCTGATGCTCTAGTTGCCCTGGAAGCCGCTAAATCAGCAGAAAATAACGTCTTGAGTGAGCAGGTCACTTCACTTCAAGACTCACTGCAGCATAGACTGGTAGAGTTGAGTGCTTTACAGCAACAACACGCACGGGCCAAGGAGGATCTGAGTGCAATTCGTGACTTGCAAGCGCAGACGGAGACCAAGGTCCAGTCAGCAACCTTGGAGCTggaaaacaagaacaaaaactGCACAAAACTTGAACAGGAACTGCAACAAAAGgCATCCGCTATTACAAATCTTGAACAAAAGAGTCACAATGAAAAGTCATCCTTGGAGAAACAGCTCTACAATGCAAAAGCTGCTTTAGAAGGCAAAGAAGCACAACTATCTACCTTTCAGAAGGACTTGGAAACATTACGAGAGGAGAGCTCAAACAAGGTCAAGGAGCTGGAATCTGCCATAAGTCAATTGAGATCTGATCTATCCACGGCAAACACTCGACTTAAGGAAAAGGAAGATATCATAAGCAGCACTCGAACCGAATTGGGAAGCACACGGGAGGAGAAAGCAGACCTTGACAGACAACTGGCTCTAGCTAACCAAAGTTTACAAGAAAAGAATCAAGAACTTGAAAGAAGTTCCAAGGAATTTGAGGACAATAAGCTTCAAATGTCCAACATGGAAGCTGCCGGAAAACAAGAGAGATCAGAACTCATGACAACGCTAAAGAACGTGAAAGAAAAGCTAGAAGAATCAAAGaatttgtATGCCAAGAAACTCGAGAGTGAGAAGGAACTACAAGACAAGATCAATGAATTGAATACAGAAATCTCAAGCCTTCAGGAAGGAATGCAAGAGCTGGGAACGGCTCATCAGAACAAGGTCGTGGCGATGGAAAACGAGTTTAGTACAAAGATCgcagaaaaggaaataagtTTGGATGAGATGCAAAAATGTCTTGAAGAGAAGGAAGATAAACTAACGCAACTACAGAGGCGTGTGGAGGTATTGGAGGCTGAATTAAAGAAAGAATGCGAGAGCTGTAAGAATTATGAATCGCAATTATGTCGGACGCAAACCCAGTTAAAGGAGGAACAAACCAAACTCTGTAATTTGGAGTCTCAGTTGCTGGTTCTCAACTCTGAACTAAGAGATTTTCAAGAGCAGATCAGCTCGTCAGAAGAGGAGCTGTCTCGCGTGAGATTAAACGCTCAGGAAACTGAAGCGAACCTTCGGCAGATGGTTGAGCAACTAAATGAGGTTAAGAATACTCTTGAGACTCAAGTTATGAACATTGAGAATGAGCTGCAGTCAACGAGAGTCACCCTTGAGAGCGTGACATCTGACAAGGACGCATTAGAAACAGAGTTGAAAAGCCAAAAGGAAGCATTTGCCTCGATGAAGGGCTCATTAGAAGATCGTATCAACGAACTGGTTGGACAAGCTGAGGCCGACAGacagcaaaaagaaaaagaACTCGAGGAAGCGAGTGACAAACTCCAGCTTCTTATAACGCAAAAGTTGGCTATTGAGAATCAGTTATCAAGTACTGAGAAAGACCTGAACAAGACCCGTGAAGAGTTCGAAGAGAGCAAAGAAGTTGCCAAACGTGTGCAGATGTTACTTAAAGAAGAGACGGCAGCCATGCAAACTAAACTGACCAATGAGACCCGTGATAAAGAAGAACAAGCCCAGAAGATGGAGGAGATGGAAACGAGGCTTAACATTCAGATCGCTTCACTGACAGAGAATATGAGTGCTGCGCGCGCAGAGGCCGAGGCCAGTGAACAGAAAGCCACTGAGATCGCCGCCAAACACAAggaagaaatgaaaaatagtGACTCACTGAGAGTAGAAATTGCAGTGTTAGAAGCAACAGTGCAAAGTAATCTAGATGAAAGAAGAAAGCTGCTAGAAAGGTGTGTAGCCGACGAGGAATGCATTGAGAAGCTCAGAAAAGAGCAGGCGTTGTTAAAAAAGCAACTAGAAGACTCAAAGGCAGCAATGATGGAATTGACACAAGAGAACCAAAACCTTCAGGTATTGAATAACCAAATGAGCACACGGCGATGGGAGGAAGATAGTGACGTCACAAACTGTAATAGTTGTGACAAGGTTTTCTCAATAACCCTAAGAAAGcaccATTGCCGGAACTGTGGACTTATCTTTTGCTCAGACTGTACCTCTAAAACAGTAACTCTTGCAGCCAGTAAGAAGCCGGCTCGAGTGTGCGAGACTTGTTACCATGAAGTGACAACAGGTTCCATAAAGAAATACCAGCTTCAACCAAACCAAGGTTTTAGCTAGGCtactgaagaaaaaaaagttgtcaAGCTTCTAAAGAATAACCAATGGACTGAAGAGAGACAAGGGATAAGGATAAGCTGCTAGAATCAAATCACTGTTCGTGTTGTAgaaataaaattgtaaaaatatCTAGGTAATttctataaataaataaaatatttctatcTTCACAAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BL66	Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2
Q15075	Early endosome antigen 1 OS=Homo sapiens OX=9606 GN=EEA1 PE=1 SV=2
Q96T51	RUN and FYVE domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RUFY1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002357 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23164 all species →	EARLY ENDOSOME ANTIGEN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005545 all species →	Molecular Function	1-phosphatidylinositol binding	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12478	EEA1; early endosome antigen 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032241614.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

44TPM > 0

16Conditions

23.5Max TPM

14.2Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	17.38	19.00
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	14.79	18.40
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	11.98	12.66
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	11.30	12.28
whole 6 week old aboral regenerate · regenerate uncut	3	3	12.83	14.35
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	7.64	12.95
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	17.59	18.59
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	17.85	19.10
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	10.17	17.11
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	15.12	16.07
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	15.85	17.28
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	18.90	23.47
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	17.16	19.01
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	11.69	21.01
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	17.62	18.73
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	9.31	16.27

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	19.00
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.83
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	16.30
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	18.40
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	14.73
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.25
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	12.66
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.93
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.35
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	12.28
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	11.66
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	9.96
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.35
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	13.24
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.89
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	12.95
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	9.96
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	18.59
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	17.99
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	16.20
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.10
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	18.58
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	15.86
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	17.11
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	13.41
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	16.07
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	14.96
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	14.33
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	17.28
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	16.54
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	13.74
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	23.47
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.91
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.32
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	19.01
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	16.46
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	16.02
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	21.01
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	14.07
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	18.73
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	18.33
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	15.81
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	16.27
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	11.66
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.