Gene detail

Detailed information of XP_032241709.2 in Nematostella vectensis

Genomic Location: NC_064047.1:6885758...6913519
NR annotation: XP_032241709.2, dystrophin isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515967

ATGTATTCTGCTCAAAATGTCGAGAGTTCGAAGCAAAATGCGACGCTAGCACGTCGTTATCTCAATGTTACACAGAGGGAGGAAGTGCACAAGAAGGCCTTTACCAAATGGGTAAACTCCAGGCTCGCTCAGGCAGATCCACCTATCGAAATTAAGAATCTGGATCGGGATTTCTGTGATGGCATAGCGCTCCTAAGTTTGCTGGAAGTTCTTCTCGATATTCGCACGCAACGAGACGCAGGAAAAACAAGGGTCCATAGGCTGAACAATGTACAGCGTGCTCTACAGATCTGCAGCGAACACGGGATCCAGCTGTTTGGTATCAGCGCGTCTGATATTGTCAACGGTACTCGCAAAACAACGCTAGGGTTGATATGGAATATCATCCTTCATTTCCAGCTACAAAACCCAACAAAGAGCGACTCCAAGGACTTCAGCGTAGAGCGCGCCCTTCAGGAGTGGTGCCAGGAAAGACTTGAACGGTACAAAGATCTCGTCACAATACGGGATTTCTCCAAAAGTTGGCGTGACGGCCTGGCGTTTAATGCAATACTGCACTCGTATCGCGGGAGTTTGTTCGACTTCGGGAAAATCATTCAGCAGGACACCTTCACAAGACTGGATAACGCGTTCAGCACCGCAAACCTCGTCTGGTCGGTGCCCAAACTACTAGACCCGAGCGATGTGGATGTAGAGAAGCCCGACAAGAAGATGATCACCATGTATCTGAGTTGTTTGTACGAGAAGATCATAGCAAACCCTCATGGTAACCTACCGGAAGGAATCACAAGCTCGGAGGAAAGCATCGCGTTACCGTCACGTGACGCGGAATCCGCCAATCAGGAAGAGGCTCCGGACGACATTGAAGGACTTCCGGTTAAGACGAAGAAGGTTCTAGAAGCTTCCCCTGCACGTATGGAACAGATATCTCCGTTGGACATTAATCTGAATAATATAGAAAACATAAATAGAGTTGATGAAACACACCACCTTTATTCTAAAGCTGATAACGAAACTTCTGCACATGACAAATCAAACGCAAATAACACTCAAGAACTACCGCTGGAAATTAGTACTGCTGGCCCTATGTCACAAACTTCCACAGCTGTAACTGAAAACGATCGAAAAACAGATTTTAAAGACATTTATCAGCTTCCGACTACCAAGGCTGATTCCAGTGCGCATGTCACAAAGGAAAAAGTACAAGTTATCAGAACTTCGGGCGGTCAAGGAATATCTGAAGGGTCACGTGTAACTCGAATAATAACAAAACGTACTGTGACAACTCACAAAGTGCCTTCTTTCACTAACCCGCAAAGCACGAGGTCTAATCCTCGAGTGAAGAAAAAGGTGTTTTATCTAAAGAAGAATACACCCCGTAGCTCCCACGCAAGAAGCTCGCCCCAGTTTCCGCCAATTTCTATAGAAGAGACGAAGACAATAAGAATAAACTCCGTCTCCAGCTGCACGCCATCAACTTCCTCGGTTTCTTTAGACGGTCAGGCTACTGATGGCAAAAAAAATCGGACGCGTAAAAGAAATCGCCACAGAAAGCAACTAACTCCGCTAACATACCCGTACAGCCGGCTGCAAACACTAGACGAGGACTCGGATCTTCTCGAAAGAAGAGTCGATCACAGCAAGATGTACAGCTTCTCCTCTATATCTGATTCAGAGTCTTCCCCAGAAAATAATGATGATGATCTCCTCAGTCAAGATTCTGCTATCGGCGACATGGGGACGATCATTTCCCGAGGGCCTCAAACTCCTTATTCAGCCAATTTAGCGAAATCAAAGTCGGATACGACGATACACCGTTTACGCGGCGAACCCGACCCGATTGCTTCACGAGAACAGAGGTCAAAGCTGTTAAGCTCTTCAAAATCAGAATCCGTCCCTTTGATGAACGAATCTTGCCGAGATTTCCCCTACAGTCCTAAAGATAAAACTTATAATAAAACAGTTTTGCTTGCTGATTTGAAAAAGCGAGGCTTTAGAACAAGTAATTTCCCTTGCAGTGGCAGTAACACTAACATCGACTATGAAGCATACTTAGACAGACGCCTAGAAGACGCCGAGTCATCCATTACTGATCTGGAACAGTGCCTTCCCATGTCGCATAGCGACAGCATTGACCTTGGCTTCGCAAAGAAGACCCTCGACGAAACTAAGGTCGTCGTGTACACACTAGACAAACTAAAGTTTGGGGTACAAGACGTCATCAGACTTGGACGCGGATTAGTTGACGACGGTTATTTTGACGAGAAAACGTCACACGGTTTCACTCGGAGAATCAACATCCTTGAGAATCGTCTGAATGATTTGAGAGCACATAGTAGCAAGGAGATGGCAAGGCTGTACGATCTGTACGTCATCCTGCTGAGACAGAACATCGACAGGATACATGATTGGCTTTTACGAGCGGAGTCCCGGATGACGCTGGACGACGGTATTGGTCCAACGCACGACGACGTTCTACAGCAACAAAAAGAACATTTCGAGTTCCAGAAGGATCTTGGTGTCTTTTCCTCGATCAATATGATTTTTGAGATCGACGTAGAAGATCTACTTCTAGACAAGCATCTGAGTGAGGAGGTACAGTCGGCGAGTGAGCGGTGGGCGAAGGTGTTTAACTGGGCGGAGGAGAGGAAACAGCGACTGAACGAAGTGCTGTTTGACTGGGAGCAATTACGAAACTCGGAGCGGGAAATATTGGAATGGATGAGGGAGCGCGAATATGAACTTGAGGTCGTGGGGAGTACTGATATAACGAATGGCGAAGAAGTTGCTGAACACATTCGAGTTCTACAGGACGCGGTAGACCAATTGAATCAAGGTGGTCGACGGTTGGACACACTTCGTAACATCAGCGTACGTCTCATAGCAGATGCGCAGTACAGCGACTCAGTGGCTCAGCGAATCAAGAGCGAGGTGCAAGATTTTGATGACTGCTGGCGATCAGCACTCGAAAACACAACCAGCCGCATCGCCCAGCTAACATGTGCTCGAGAAAGGTTCTTGGAAATGTCTGCTTTGGTACAAAACGTCAAGGAGTGGCTGTGTGGAGTCGAGGATATTCTTAGAAAATCTAACGAGTCTACTGGAAAACAGAAAGACGAGGAGAGGTCGTGTTTACATGAGATTGAGCTGAAATACGACCAACGATACGAAAAGCACCTAAAGGTTGACAGAATTACTCAACTCGAGGCGGCCATTGCCGAAGAGATCGATCAGCCTTCCCATGATGCAATGCACTTGGTCACCACTAATTTGATCAAAAGATACCAAGAGGCGTGCGAGGGACTGGAGAGGAGAAGAGAGGGATTACCGCTGCCTCAGCACGATGACTGTTGTCTCATGAAATATCTTAAAAGGAGAATAATGTTCGGCGGCTATCCTGAGAAGTTCGCAAACTTTTTCACTAAATGA

Transcript

rna-XM_032385818.2

TATCGAATAAGACGTTTCGTTTACAAAAACGTGACACATCATTTTGCTGTCCCCCAAACGTACAACGGACTCTGTGTTCATGTATTCTGCTCAAAATGTCGAGAGTTCGAAGCAAAATGCGACGCTAGCACGTCGTTATCTCAATGTTACACAGAGGGAGGAAGTgcacaagaaggcctttaccAAATGGGTAAACTCCAGGCTCGCTCAGGCAGATCCACCTATCGAAATTAAGAATCTGGATCGGGATTTCTGTGATGGCATAGCGCTCCTAAGTTTGCTGGAAGTTCTTCTCGATATTCGCACGCAACGAGACGCAGGAAAAACAAGGGTCCATAGGCTGAACAATGTACAGCGTGCTCTACAGATCTGCAGCGAACACGGGatccaGCTGTTTGGTATCAGCGCGTCTGATATTGTCAACGGTACTCGCAAAACAACGCTAGGGTTGATATGGAATATCATCCTTCATTTCCAGCTACAAAACCCAACAAAGAGCGACTCCAAGGACTTCAGCGTAGAGCGCGCCCTTCAGGAGTGGTGCCAGGAAAGACTTGAACGGTACAAAGATCTCGTCACAATACGGGATTTCTCCAAAAGTTGGCGTGACGGCCTGGCGTTTAATGCAATACTGCACTCGTATCGCGGGAGTTTGTTCGACTTCGGGAAAATCATTCAGCAGGACACCTTCACAAGACTGGATAACGCGTTCAGCACCGCAAACCTCGTCTGGTCGGTGCCCAAACTACTAGACCCGAGCGATGTGGATGTAGAGAAGCCCGACAAGAAGATGATCACCATGTATCTGAGTTGTTTGTACGAGAAGATCATAGCAAACCCTCATGGTAACCTACCGGAAGGAATCACAAGCTCGGAGGAAAGCATCGCGTTACCGTCACGTGACGCGGAATCCGCCAATCAGGAAGAGGCTCCGGACGACATTGAAGGACTTCCGGTTAAGACGAAGAAGGTTCTAGAAGCTTCCCCTGCACGTATGGAACAGATATCTCCGTTGGACATTAATCTGAATAATATAGAAAACATAAATAGAGTTGATGAAACACACCACCTTTATTCTAAAGCTGATAACGAAACTTCTGCACATGACAAATCAAACGCAAATAACACTCAAGAACTACCGCTGGAAATTAGTACTGCTGGCCCTATGTCACAAACTTCCACAGCTGTAACTGAAAACGATCGAAAAACAGATTTTAAAGACATTTATCAGCTTCCGACTACCAAGGCTGATTCCAGTGCGCATGTCACAAAGGAAAAAGTACAAGTTATCAGAACTTCGGGCGGTCAAGGAATATCTGAAGGGTCACGTGTAACTCgaataataacaaaacgtaCTGTGACAACTCACAAAGTGCCTTCTTTCACTAACCCGCAAAGCACGAGGTCTAATCCTCGAGTGAAGAAAAAGGTGTTTTATCTAAAGAAGAATACACCCCGTAGCTCCCACGCAAGAAGCTCGCCCCAGTTTCCGCCAATTTCTATAGAAGAGACGAAGACAATAAGAATAAACTCCGTCTCCAGCTGCACGCCATCAACTTCCTCGgTTTCTTTAGACGGTCAGGCTACTGATGGCAAAAAAAATCGGACGCGTAAAAGAAATCGCCACAGAAAGCAACTAACTCCGCTAACATACCCGTACAGCCGGCTGCAAACACTAGACGAGGACTCGGATCTTCTCGAAAGAAGAGTCGATCACAGCAAGATGTACAGCTTCTCCTCTATATCTGATTCAGAGTCTTCCCcagaaaataatgatgatgatctCCTCAGTCAAGATTCTGCTATCGGCGACATGGGGACGATCATTTCCCGAGGGCCTCAAACTCCTTATTCAGCCAATTTAGCGAAATCAAAGTCGGATACGACGATACACCGTTTACGCGGCGAACCCGACCCGATTGCTTCACGAGAACAGAGGTCAAAGCTGTTAAGCTCTTCAAAATCAGAATCCGTCCCTTTGATGAACGAATCTTGCCGAGATTTCCCCTACAGTCCTAAAGATAAAACttataataaaacagttttgCTTGCTGATTTGAAAAAGCGAGGCTTTAGAACAAGTAATTTCCCTTGCAGTGGCAGTAACACTAACATCGACTATGAAGCATACTTAGACAGACGCCTAGAAGACGCCGAGTCATCCATTACTGATCTGGAACAGTGCCTTCCCATGTCGCATAGCGACAGCATTGACCTTGGCTTCGCAAAGAAGACCCTCGACGAAACTAAGGTCGTCGTGTACACACTAGACAAACTAAAGTTTGGGGTACAAGACGTCATCAGACTTGGACGCGGATTAGTTGACGACGGTTATTTTGACGAGAAAACGTCACACGGTTTCACTCGGAGAATCAACATCCTTGAGAATCGTCTGAATGATTTGAGAGCACATAGTAGCAAGGAGATGGCAAGGCTGTACGATCTGTACGTCATCCTGCTGAGACAGAACATCGACAGGATACATGATTGGCTTTTACGAGCGGAGTCCCGGATGACGCTGGACGACGGTATTGGTCCAACGCACGACGACGTTctacagcaacaaaaagaacATTTCGAGTTCCAGAAGGATCTTGGTGTCTTTTCCTCGATCAATATGATTTTTGAGATCGACGTAGAAGATCTACTTCTAGACAAGCATCTGAGTGAGGAGGTACAGTCGGCGAGTGAGCGGTGGGCGAAGGTGTTTAACTGGGCGGAGGAGAGGAAACAGCGACTGAACGAAGTGCTGTTTGACTGGGAGCAATTACGAAACTCGGAGCGGGAAATATTGGAATGGATGAGGGAGCGCGAATATGAACTTGAGGTCGTGGGGAGTACTGATATAACGAATGGCGAAGAAGTTGCTGAACACATTCGAGTTCTACAGGACGCGGTAGACCAATTGAATCAAGGTGGTCGACGGTTGGACACACTTCGTAACATCAGCGTACGTCTCATAGCAGATGCGCAGTACAGCGACTCAGTGGCTCAGCGAATCAAGAGCGAGGTGCAAGATTTTGATGACTGCTGGCGATCAGCACTCGAAAACACAACCAGCCGCATCGCCCAGCTAACATGTGCTCGAGAAAGGTTCTTGGAAATGTCTGCTTTGGTACAAAACGTCAAGGAGTGGCTGTGTGGAGTCGAGGATATTCTTAGAAAATCTAACGAGTCTACTGGAAAACAGAAAGACGAGGAGAGGTCGTGTTTACATGAGATTGAGCTGAAATACGACCAACGATACGAAAAGCACCTAAAGGTTGACAGAATTACTCAACTCGAGGCGGCCATTGCCGAAGAGATCGATCAGCCTTCCCATGATGCAATGCACTTGGTCACCACTAATTTGATCAAAAGATACCAAGAGGCGTGCGAGGGACTGGAGAGGAGAAGAGAGGGATTACCGCTGCCTCAGCACGATGACTGTTGTCTCATGAAATATCTTAAAAGGAGAATAATGTTCGGCGGCTATCCTGAGAAGTTCGCAAACTTTTTCACTAAATGATAATTGTTGTTGAATGAATAATAAATGCATTTGTTTTGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46939	Utrophin OS=Homo sapiens OX=9606 GN=UTRN PE=1 SV=2
P11533	Dystrophin OS=Gallus gallus OX=9031 GN=DMD PE=2 SV=1
G3V7L1	Utrophin OS=Rattus norvegicus OX=10116 GN=Utrn PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001145 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR018159 all species →	Repeat	Spectrin/alpha-actinin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11915 all species →	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030018 all species →	Cellular Component	Z disc	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030054 all species →	Cellular Component	cell junction	Interproscan
GO:0030864 all species →	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0042995 all species →	Cellular Component	cell projection	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0055001 all species →	Biological Process	muscle cell development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032241709.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032241709.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

46TPM > 0

16Conditions

34.3Max TPM

17.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	12.86	13.52
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	11.64	16.03
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	12.83	14.02
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	13.13	13.56
whole 6 week old aboral regenerate · regenerate uncut	3	3	12.15	13.86
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	10.70	16.84
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	15.36	16.14
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	18.95	21.19
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	26.65	28.33
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	28.92	30.47
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	26.13	27.84
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	18.27	25.79
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	14.17	15.19
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	10.54	17.84
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	19.67	24.19
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	27.62	34.28

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	13.52
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	12.78
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	12.28
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	16.03
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.10
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	8.79
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	14.02
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	12.78
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	11.70
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	13.56
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	13.37
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	12.46
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	13.86
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	12.54
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.05
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	16.84
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	15.26
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	16.14
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	16.04
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	13.91
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	21.19
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.37
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	16.29
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	28.33
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	27.04
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	24.58
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	30.47
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	29.34
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	26.96
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	27.84
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	26.95
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	23.61
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	25.79
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	15.83
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	13.19
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	15.19
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.92
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.39
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	17.84
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	13.78
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	24.19
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	19.05
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	15.78
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	34.28
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	25.55
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	23.04

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.