Gene detail

Detailed information of XP_032242026.2 in Nematostella vectensis

Genomic Location: NC_064034.1:1300111...1308514
NR annotation: XP_032242026.2, E3 ubiquitin-protein ligase Topors isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516287

ATGGAGGAGTGCAGTGGTAACACGAGCACGAATGAAGGTCAAGGGAATGGTACCACATCAACCACCCCTTCTGACAGGGATGCTAATGACATCGTTACTACTGAGAGCAGTTCATCTGTAAAACATGACCATATCGTGGATGGTAAAACAGTAAAATCTGAAATAGAACAGCCTGTCATAACAGTGAAGTCCCTTGTTCTAAGAAATGCTTCAGATATTGTGGTATCAAGTGATGATGAGGTTGAAATTGTAAATATCATTTCTGCTGAGTCAAAAAAGAAGATAATAGGACCTCCAATAGAGATAAGGTCTGATGGTGAAGAAAAATTGGTGAAAGATGAAATTAAAGTTAGAGCCTGCCCATCACAGGAGAGTAGAACGACATCAGACGATGACGCACCCCAAGATCAGTGCTCAATATGTCTATGTGAATTTGATAACAAGTCTTTCTTAGATCAGTGTTTTCATGCCTTCTGTTTCTACTGCATCCTTCAATGGTCGGAGGTGGTGCGGAAATGTCCTTTGTGTAAAGCAACATTTTTTTCTATTATACACAGTGTCAAGTCTATGGTGGAGTTTGAACAGCATCATCTTCCAGAACCTGCAGAAACGTCTCTCCCCACAGATGCCAATCAGGAGGGTAGGAGGTTCCGTTATCGCACAACCTTGGTTGATGGAAGGCCACCATTGCAAAGAAGAGCGAGACCACCAGTGTTAGATGCATGGCAGAGAAGAGAGCAGCAACGCCAGCTTTATCAGTCCAGGCAGAGACAAAAAGCTGTTATGGCCAAAGAAAAGAGAAGAACTGTATATGCAAACAACCTATGGGTTCAACATGTCCCTCAGAGAGGAAAGCCAAAGTTTAGAGATATTAGTGCTGAGTTCCTCCGTGCAAACCCTGCCTGCATCCATCGTCTTGTTCCATGGTTGTCTCGTGAGCTGCATGTGTTACTGGATGATGACCAAAGCACTGTTGAGCTTGTTATGCCGCTAATAACAAGATTAATCACAAGGGTTGAGATTCAGTCTGATGAATTTGCTGAGCAGCTACAGCAATTTCTTTTCGATAAGTCATACCATTTTGCCCATGAGTTTGCTAGCTTTGCTCGCTCTCCATTTGACATGTCAACTTATGATGACAGGGCAGAGTATAACAAGCCTAAGAACCCTACCTCTGTGGACCCTGGAACGCCCGTGGTATTCCAGAGTAGTTCAACAGGATGGGATAGTCCAGACACAGCTTCACCATTGGCAGTTCTGCCAGCAAGTGATACAACCTGTTTATCTGGTTTTACCAGTTTACCTGGCCCATCTGGAGTGACAGCTTTCTCTCAACCGTCAAGATGGGATGATGGTCAAACGAATCGTCATCTAAGTAACAATTGGTCACCTCCCTCAGAAGCGAATCCGTACATCCCAACGATCCACATCCGAGATGAAAGCACTTCACCAGAGAGTGTAAGAATGCAAGAAGTAAGCCCATCTTCAGAGACTTCAAGAAGGACTGTGTCCGGTCATTCAGCTAAAGAAGATAGAACTTCGAAAAAGCGCAAGAAAGCACGCAAACACAAGCGCAAGCGCAAGCATAGCAAACACAAGAGTGAAAAACAATCGATCGAAAATGGTAGACCCACTCGCACTCAACCTGGAGGGTCACTTAACTCATCTTCGCGGTCACGCACTAAATCGCGTTCGCGATCACGCATTAGATCGCGTTCACCCGCTAGATCACGTTCGTGGTCACACACTAGATCACGTTCGCGGTCACACACTAGATCACGTTCGCGGTCACACACTAGATCACGATCAAGATCTCGCATTAGATCACGTTCGCGATCACAGGAGCTGGATTCACGCACTTTGAGGTCGAAAAAATCTTTCGAGAGGCGGTCTAGGGCATCGCACCGTGAATCAAGATCACGCAGTAAATCACGCACAAAAAGGGAACGATCTCGTAAAAAATCACGTTCACGAAGCAGGCCACGTTCACGGAGCAGATCACGCGGAGATTCTTTGACTGGGTTCCACTCGACTTCATTAAGTGACAGATCACACAAAACGGCTGGAGCATCACGATCACGTCAAGTGGAACCGAACTCCAAGGAGGATCGCTCACTTCCGGCACCGGCGTCTCCAACGGAAGCGGAAATGAAACAAGAGATAGCTGAACTCGAGATACGCATAGCCGCTGACCGCAAAAGGTTGCTTGAACTTTTACAGAAACAGAAAGAGCGAAAGACTGAGGAGGCTCATGAGAATGTGGATGGCTGTGGCGGAGAGGAGACTTGTGACAAGAATATTCTGAGTGACAGCTGA

Transcript

rna-XM_032386135.2

TAAGAATAAGGGCCAAGAAGAAGCCACTTTGATGTGTTATCGTCTTATATACAAAAAGCCATAGGAACAAACTCCTCATAGATCTTTGTTGTTAGTAAGAAGAGAGGGAGAGATTTGTTACAAACTGAAAGATTCTGCATCTTCTAACGGGCTGCGTTTGTTAGCACGTGCTTGTTTGGCTTCTAGCTTGATCATAATGGCTGATCATTTTCTGCTAAGTGACACACTGTGATGGTACATCCTTCTCAAATGCATTTGGCAGTGTCATGGTTCAAAGGGAGTTTTGAGGATGGAGGAGTGCAGTGGTAACACGAGCACGAATGAAGGTCAAGGGAATGGTACCACATCAACCACCCCTTCTGACAGGGATGCTAATGACATCGTTACTACTGAGAGCAGTTCATCTGTAAAACATGACCATATCGTGGATGGTAAAACAGTAAAATCTGAAATAGAACAGCCTGTCATAACAGTGAAGTCCCTTGTTCTAAGAAATGCTTCAGATATTGTGGTATCAAGTGATGATGAGGTTGAAATTGTAAATATCATTTCTGCTGAGTCAAAAAAGAAGATAATAGGACCTCCAATAGAGATAAGGTCTGATGGTGAAGAAAAATTGGTGAAAGATGAAATTAAAGTTAGAGCCTGCCCATCACAGGAGAGTAGAACGACATCAGACGATGACGCACCCCAAGATCAGTGCTCAATATGTCTATGTGAATTTGATAACAAGTCTTTCTTAGATCAGTGTTTTCATGCCTTCTGTTTCTACTGCATCCTTCAATGGTCGGAGGTGGTGCGGAAATGTCCTTTGTGTAaagcaacatttttttctattatacaCAGTGTCAAGTCTATGGTGGAGTTTGAACAGCATCATCTTCCAGAACCTGCAGAAACGTCTCTCCCCACAGATGCCAATCAGGAGGGTAGGAGGTTCCGTTATCGCACAACCTTGGTTGATGGAAGGCCACCATTGCAAAGAAGAGCGAGACCACCAGTGTTAGATGCATGGCAGAGAAGAGAGCAGCAACGCCAGCTTTATCAGTCCAGGCAGAGACAAAAAGCTGTTATGGCCAAAGAAAAGAGAAGaacTGTATATGCAAACAACCTATGGGTTCAACATGTCCCTCAGAGAGGAAAGCCAAAGTTTAGAGATATTAGTGCTGAGTTCCTCCGTGCAAACCCTGCCTGCATCCATCGTCTTGTTCCATGGTTGTCTCGTGAGCTGCATGTGTTACTGGATGATGACCAAAGCACTGTTGAGCTTGTTATGCCGCTAATAACAAGATTAATCACAAGGGTTGAGATTCAGTCTGATGAATTTGCTGAGCAGCTACAGCAATTTCTTTTCGATAAGTCATACCATTTTGCCCATGAGTTTGCTAGCTTTGCTCGCTCTCCatttgacatgtcaacttatGATGACAGGGCAGAGTATAACAAGCCTAAGAACCCTACCTCTGTGGACCCTGGAACGCCCGTGGTATTCCAGAGTAGTTCAACAGGATGGGATAGTCCAGACACAGCTTCACCATTGGCAGTTCTGCCAGCAAGTGATACAACCTGTTTATCTGGTTTTACCAGTTTACCTGGCCCATCTGGAGTGACAGCTTTCTCTCAACCGTCAAGATGGGATGATGGTCAAACGAATCGTCATCTAAGTAACAATTGGTCACCTCCCTCAGAAGCGAATCCGTACATCCCAACGATCCACATCCGAGATGAAAGCACTTCACCAGAGAGTGTAAGAATGCAAGAAGTAAGCCCATCTTCAGAGACTTCAAGAAGGACTGTGTCCGGTCATTCAGCTAAAGAAGATAGAACTTCGAAAAAGCGCAAGAAAGCAcgcaaacacaagcgcaagcgcaagcATAGCAAACACAAGAGTGAAAAACAATCGATCGAAAATGGTAGACCCACTCGCACTCAACCTGGAGGGTCACTTAACTCATCTTCGCGGTCACGCACTAAATCGCGTTCGCGATCACGCATTAGATCGCGTTCACCCGCTAGATCACGTTCGTGGTCACACACTAGATCACGTTCGCGGTCACACACTAGATCACGTTCGCGGTCACACACTAGATCACGATCAAGATCTCGCATTAGATCACGTTCGCGATCACAGGAGCTGGATTCACGCACTTTGAGGTCGAAAAAATCTTTCGAGAGGCGGTCTAGGGCATCGCACCGTGAATCAAGATCACGCAGTAAATCACGCACAAAAAGGGAACGATCTCGTAAAAAATCACGTTCACGAAGCAGGCCACGTTCACGGAGCAGATCACGCGGAGATTCTTTGACTGGGTTCCACTCGACTTCATTAAGTGACAGATCACACAAAACGGCTGGAGCATCACGATCACGTCAAGTGGAACCGAACTCCAAGGAGGATCGCTCACTTCCGGCACCGGCGTCTCCAACGGAAGCGGAAATGAAACAAGAGATAGCTGAACTCGAGATACGCATAGCCGCTGACCGCAAAAGGTTGCTTGAACTTTTACAGAAACAGAAAGAGCGAAAGACTGAGGAGGCTCATGAGAATGTGGATGGCTGTGGCGGAGAGGAGACTTGTGACAAGAATATTCTGAGTGACAGCTGATCGTTATTCCGCTATTTTTGATGTAACATTCGccaaaaattaaacaaaagcGAAAATTATTTTACCATCATGATAATagctaaaataaaattttaagaaAGTTTTGTCTGTGTTATTGTTTTGACCGTTTTGCCTTTGCATTAGTCTCCTTTCGTGACTCGGACACGAGcggctgcaaaggagactaCCTTAGGATCTGATAGACGTCCGGGGCAAATGCAAACAAGCTGAACTCACTTTGCGCGGACTCTTGTCTTTCGGACAACTGCGACTAGCACGGAAAACTCGCCCATTTACTAACATCTAACGCGACATTTTAGACTTCAGTAAACTCTCGCCATcaggaatttccaaccccctggaaaaaaagtaaatacagtaactgttaaggaaaatgGGCAttgatacccctcccccccccggaatttccaatcccctctatgaggggtatggatattttctggaactacacattaaAGATAGCGGCGTTCGAACGCCAGTCCagcgaaatacaaaaaaaagaggcctctgctagcagggaagaaTAGCACTAAAGCCCCATCTACACACtaacaatttttagttgacaactGTATTTGTTGGCATCTACACTAGCAATTTTTCATGTATGAATAGTTGAATTGCCCAAAAAAGCAAACCTGCTAGCTTTTGAGCTACTATAGTTGCCACATTAAAAATTGCCGACTTTGCTGCATCTACACTAGCAAACAAAaattgtcaactaaaaattggTAGTGTAGATGGGGCTTAAATGTATCAAATTTTATAGGCCACTTAAATCatttttcactttttctcCTTGTAACATTTTGCCCTGAACCACCTATACCAACTTAAATCGACAGAATAATTTTTATGCCTTTATTGTCGAATTTGCCTTGCTCGGTAAGCAGGTGTCTAGCTGAAACTAGATTTTCCTTTAAGTAATTACAGGACAATTTGTTCGGTACACAGGAAATCATGAGAGATAAAGTCGAGTATCTATTAGAGGTGTGCTTGTATGTGCTGTTGTTATCAACATTTCAACTCTCGTGCCACCCACTTTCGTATGCAAAATTTACTTTTCTAAGCTTTTGTAAGCAAATAAAACTTGTAAGAATGACACTTGTGAGAGTTAACCTGTGAGCAACCTGTGAGAGTTATTATCAGGATTAAGTAAAGCAACCTTGCTCGcgtaaataaaattatatctAAAGAGAATTAAAAAGATGGCAACCATATCAGTTAAGCATTTAAAATTTGTTAAACATTGACAAGACAAAGGTTTAAATAACTAATGCATCGTGAAATCTACTTGAGAATGGCTTATAAAAGTGCGCGAGTTTCCTCAACGCTTCACAAGCGGTATTGAATTATCCAAGGACGGCCCCCAAAGGACTCAAAGTGTTTCTAGTTACATCGTCAAGATTGTGTTGTCTtcttcatcaccatcagcTGTGCAGGTGAACCCCTTGTTCTAGTGCAGACGCCGTCATGAAAAGCTCTCTGCTGTTCTTACTGGTTCTTCTATGTGTGCTCGATCTAGCACTCACAGAGACATGCAGTTCCTCTAGTCCTATCCGCGAAGTGTATGTGATGAAAAGGCGGCTCCGATTATCTCCGTTCAGTCTCTGCTACATGTCGCACACGGCCCTGCTCGTTCACACCGCTGATAACAAGGATTGCGTGATCGAATACCTCGTGGATGGCCGAGCCCATCTGTATGATGCTAGACCCACGCTCAGATGGCGCTGCTGGTTCAAGAAATGCTATGTAATGCGCATGGCTGACAACCAAGGTCACATGTACTTCTGGGAACGCGACCTGTACAGTCAACATCTGTCCAGGGCCTACTCGAGTATTACCCCACAGGAGGCCCGCGATAAGATGCAAAAACTGATGGGATATGACTACGATTTGCTCAAACACAACTGCCACCACGCGCAGCAAAAGCTGCGAACTAGCTGGGGTTTACATGTCCAGAACCCGTACACAGATGCGAAGTCCGTCTGCACCTGCTTGCCTCGATGGGTCCCTCACTCTCTGAGGAGGTTCTATGAGAAGGTCTCGAGGCTCTGTAAAAAGGTCATTGGacatgacgatgatgatgatgatgacgatgatgataagcGCGCTTTGCGTGAAGGCACTCGCCGTGTTGCAGGCCTAGCACGTGCATGAGGCTATTAATGTTATAGCAGCTATAAACGTGATTATAGAAAAACGTAAGAATATGATTTCACGCTCACTTGTAAAAAGTGCATTTGCATTAATAAAGTTTGGAGAACCCTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NS56	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1
Q80Z37	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1
Q9V8P9	E3 ubiquitin-protein ligase Topors OS=Drosophila melanogaster OX=7227 GN=Topors PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003724 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13639 all species →	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46077 all species →	E3 UBIQUITIN-PROTEIN LIGASE TOPORS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006513 all species →	Biological Process	protein monoubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10631	TOPORS; E3 ubiquitin-protein ligase Topors	EC:2.3.2.27	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242026.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

43TPM > 0

16Conditions

16.2Max TPM

9.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	10.76	11.32
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	9.05	10.30
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	9.74	10.09
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	11.07	11.31
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.92	8.63
whole 6 week old aboral regenerate · regenerate 4hpa	3	3	10.73	11.21
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	7.34	11.45
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	11.77	12.41
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	7.89	12.39
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	11.53	12.50
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	11.13	11.26
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	13.06	16.25
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	12.07	14.14
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	6.82	12.19
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	9.58	11.85
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	4.13	12.39

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	11.32
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	10.76
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	10.20
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.30
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	9.19
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.64
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	10.09
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.68
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.45
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	11.31
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	11.28
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	10.61
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.63
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.89
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.22
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	11.21
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	10.97
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	10.01
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.45
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	10.58
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	12.41
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	12.02
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	10.87
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	12.39
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	11.29
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	12.50
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	11.13
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	10.96
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	11.26
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	11.21
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.92
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	16.25
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	12.97
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.97
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	14.14
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	11.18
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.89
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	12.19
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.28
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.85
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.69
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	5.19
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	12.39
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.