Gene detail

Detailed information of XP_032242038.2 in Nematostella vectensis

Genomic Location: NC_064034.1:2092868...2105996
NR annotation: XP_032242038.2, tubulin tyrosine ligase 3 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516347

ATGTACGCGCGAGAAGAAGATTGGAGGCGGGGATTCTTACGACCAGATCAAAGCCGCTCTCTGGCTAGTCTGTCCCAACAGAGTGAGAATTGTTGTGGTGGCGATGGCGAAGGGTTGTCTATGGAATCACTGTCACTGCCAACCAAACCAGGGGAACTGGCTTTGTACAGGTCTGTTAGAAGACAACCAGAAGATTTGGAATCAGAGGACAACAAATTAAATCCTTTGAAAGAAATTTCGAGAAGTAAAACTATGGTTTCTACGATGAAGCCGCAGCCACGCGTTAGTTTTGAATCGGAGTTGACTTTTGCACCTAAGTTGAACGCCCAAAGCATCAAGTTAGCAAGAGAGAGAGGAGATAGACTTCAACAAGCTTTACACAGAAGGGCTGCCGCCCTGCACGCTGAGACCGAATCAAACTTTACTTTCAAGCCGAAAGTGAGCTCCAATAGTGTCAAGATTGTACAAAATATGAAGATGACTTTCTTAGATCGTCAACAATTGCATGTCGAGAAACAACGAAAGCATACAGAAAACCTGATGGTTGCATATCAAGCAAAAACAAGACTCACTCCTGTTAATGTTTTAAAATCACCCACAAGATCCAAGAAAAGTAAATCGAAGAACTCTGAAAGCTATGAGGGAAGTAGACAAGATTTGCAAGGTAAGAGCTCCTTTGAGTCAATTCCTTCATCACTTTCAAATACTACATCAGAAAATAGAGTCCCTGAAATAGAAGTAATACCAGACAGTACGGATGAGTCTGACTCCCCTGCCTTGTCAACTACTGAATTGACAACAAGGAACTCTAGATCCAAGCCTGGAAAAACCTGTGAAGGTGCAAAAAGAATACTAGAATCAAGCCCTTATAATCAGTCAGTGGAAAACCTTTGTATGAACAAATGTAAAAGAACTATACGGACAGTGCATAAACGAGGCTTAACCCATCCCCAAACAAGAGCAGAAGAGTGTGAGGGATGGAATAATAGCACTAAGGTAGATAATGGACAGGCAACATCCAGACCTGAGAGACCAGCAAGAACCAGCCATAGCAGAACAACCTCACAGCCCTCCCAATATTGTGGCAAAATGAAATATGATGATCCCTTATTTGAAAAAGTCCGGCAAGCAAAAGAGGTAGCTGATATTGCAATAAAGAACAAGAAAGTCTTCATCTGTCATGGGACCTACCCCATTGTGCGTGCTACCCTGAGGAGGCGTGGCTGGGTCGAAAAGCACTTTAAAGGAAGCTTGATATCTAAAAAAGCCAAAAGGAAGCAAACAAATAAGGACTATGATAGCGATGATGATTCTTGTGATAGTGGTGATGATAGTGGTGCAGATACACCATCATCAAATGTCACCCCTAGGGGCAAGAACAAAGATGCAAAGAAAAAACTAGCACCAAAATGTGAAGCTAAAAGGGATGATGGCAGCGATGACAGTGAAAGTGATGATGACAATGATGATGACGATGAGGATTGGAATGCAGGGAAAGAGGATGATCCAAACTGCGAGTTCAATCTCATGTCACGAATGGTCCGTAATGCTGTTCCATCCTTAATTTGGACTGTCAAGAGGGATGACGTCGACTTCAAGTTTTTGAGAAAGGATCAAATAGTGAATCATTACTCCAAGGCGCACTCCTTCACGACTAAGGTTGGTCTATGTATGAATCTTCGTAATCTTCTCTGGTACGAGAACACCGACGCTATGAGCTTCTTCCCGAGATGTCACCGACTTGGCGCAGAGGAAGACATTCTAGATTTTGTCGATGATTTCCGGCTGACGTCAGCTGTTGCGCTTGTGCGTTGGGTTGTGCAAAGACATGAGAATGGACGCTCTTCGCACCAGTCTTCCTCAGAGACGGACACCCAGGGTACCCATGACATGGCTGCTCAGAGCGACTCAGACCACAGTCCCAGGAACGTGCTGTCAGTCAGGGCCCTTACGCTTGCACTTGAAGCATGCCGGGAATTTCTGCATTGCAAGGAACATCTTGATATTGATGACACCACGAGCACGAGTTCCTCCATCACGGAAGTCATGTGGGACGAGATCGTCAACTCATCATATCAGCTCCGGAGTGGCGCAGTGATCGCTAATGCCTCTCCTTTTGCGCGAGAATGCCAAAGTACTCTGAACCAGTTAAGAGAGCATCTGCCTCAGTTTGACATCGACGGAGTAAGAAACGTCTGGATTGTGAAGCCTGGGGCCAAGTCACGAGGTCGAGGTATCGTGTGCATGGATAAACTAGAGGATATAATGAAGCTGACAGGCAACATTGTTGGTCAAAAGGAAGGAAGATGGGTGGTACAGAAATACATAGAACGCCCCTTGTTGATCTACGGCGTCAAGTTCGACATTCGTCAATGGTTCCTGGTCACTGACTGGAATCCACTCACTCTCTGGTTTTATGAGGATTGCTATCTACGCTTTTGCAGTCAGAACTTCTCTCTTGAAGACTTCCACGTGAGCATCCATCTTGCTAATAACTCCATTCAAAAGAACTACGATAATAACAGCACTCGCGACAAGAGGCTACCTGATGAGAACATGTGGAGCTCAGACGAGTTCAAGGCCTACCTCAAGAAGCGTGACCTCGGGCACATGTGGGATTCCGTCATCTACCCAGGGATGAAGCAGGGAGTCATGAATGTGCTACAGTCGTGCCAAGAAGTAGTGGAGTGCCGCAAGAACTCCTTTGAGCTATACGGAGCAGACTTTATCATTGGAGTCGACTACAAACCTTGGCTGATTGAGATAAACTGCAGCCCAACCATGGGCGCCAGTACAGCGGTCACCCGCAAATTGTGTGCCCAAGTGTTGGAGGATACAATGAAAGTTATTCTTGATCGGAAAGAAGACAAGAACTGTGGCACTGGAAGATTTGAGCTCGCCTATAAACAGGCTCACGTGAGTGCGCCCCCATACATAGGGATAAACATGTCCGTGGAAGGGACGGGGATATTTCAAAAGACCGCACCCATCAGGCGCTCAAGCTCAGCAAAACTCACGACCCTTGCGAGGCCGCAAGAGAACAAGAAAGGCTTCCCGTCTCCCCAGCAGCAAGAGTCTACAGACATGACATCTAATAACACCAAAGCAACAAGCAACCGAACAACCTTTGTTAAAAAGTACGAGGGCGCCTGGGCAATGGGGTGTATAAGCACCTCTCAAAAGCCCGCCCCATTACCCAGCCATACGCCACGGCCAAGAGAGGACGATAAACCTGCTAGGAAACTGGTCAAGAGTAAAGCAGAGTTTCAGGTCACGAATGGACAGACTCCGCGTGTGTCACGCACTATGACGATACCAAAAGCGGTGTTGCGTTACTCTAGTGAAGCGGGAATGAAGGAGCGGACCCAGTTGCCCATATCTATTGGTCCAGACTCTCGTGGTAACGCATTCTGA

Transcript

rna-XM_032386147.2

AAGGGACACGAAAAAACGACAACGAGAAAGGAAAAAGCTCCCATAGctctttgtgacgtcatcaatgtcATTTATACGGCGCGCGAGCTAACCATTCAATGTACGCGCGAGAAGAAGATTGGAGGCGGGGATTCTTACGACCAGATCAAAGCCGCTCTCTGGCTAGTCTGTCCCAACAGAGTGAGAATTGTTGTGGTGGCGATGGCGAAGGGTTGTCTATGGAATCACTGTCACTGCCAACCAAACCAGGGGAACTGGCTTTGTACAGGTCTGTTAGAAGACAACCAGAAGATTTGGAATCAGAGGACAACAAATTAAATCCTTTGAAAGAAATTTCGAGAAGTAAAACTATGGTTTCTACGATGAAGCCGCAGCCACGCGTTAGTTTTGaatcggagttgacttttgcACCTAAGTTGAACGCCCAAAGCATCAAGTTAGCAAGAGAGAGAGGAGATAGACTTCAACAAGCTTTACACAGAAGGGCTGCCGCCCTGCACGCTGAGACCGAATCAAACTTTACTTTCAAGCCGAAAGTGAGCTCCAATAGTGTCAAGATTGTACAAAATATGAAGATGACTTTCTTAGATCGTCAACAATTGCATGTCGAGAAACAACGAAAGCATACAGAAAACCTGATGGTTGCATATCAAGCAAAAACAAGACTCACTCCTGTTAATGTTTTAAAATCACCCACAAGATCCAAGAAAAGTAAATCGAAGAACTCTGAAAGCTATGAGGGAAGTAGACAAGATTTGCAAGGTAAGAGCTCCTTTGAGTCAATTCCTTCATCACTTTCAAATACTACATCAGAAAATAGAGTCCCTGAAATAGAAGTAATACCAGACAGTACGGATGAGTCTGACTCCCCTGCCTTGTCAACTACTGAATTGACAACAAGGAACTCTAGATCCAAGCCTGGAAAAACCTGTGAAGGTGCAAAAAGAATACTAGAATCAAGCCCTTATAATCAGTCAGTGGAAAACCTTTGTATGAACAAATGTAAAAGAACTATACGGACAGTGCATAAACGAGGCTTAACCCATCCCCAAACAAGAGCAGAAGAGTGTGAGGGATGGAATAATAGCACTAAGGTAGATAATGGACAGGCAACATCCAGACCTGAGAGACCAGCAAGAACCAGCCATAGCAGAACAACCTCACAGCCCTCCCAATATTGTGGCAAAATGAAATATGATGATCCCTTATTTGAAAAAGTCCGGCAAGCAAAAGAGGTAGCTGATATTGCAATAAAgaacaagaaaGTCTTCATCTGTCATGGGACCTACCCCATTGTGCGTGCTACCCTGAGGAGGCGTGGCTGGGTCGAAAAGCACTTTAAAGGAAGCTTGATATCTAAAAAAGCCAAAAGGAAGCAAACAAATAAGGACTATGATAGCGATGATGATtcttgtgatagtggtgatgatagtggtgcaGATACACCATCATCAAATGTCACCCCTAGGGGCAAGAACAAAGATGCAAAGAAAAAACTAGCACCAAAATGTGAAGCTAAAAGGGATGATGGCAGCGATGACAGTGAaagtgatgatgacaatgatgatgacgatgaggATTGGAATGCAGGGAAAGAGGATGATCCAAACTGCGAGTTCAATCTCATGTCACGAATGGTCCGTAATGCTGTTCCATCCTTAATTTGGACTGTCAAGAGGGATGACGTCGACTTCAAGTTTTTGAGAAAGgATCAAATAGTGAATCATTACTCCAAGGCGCACTCCTTCACGACTAAGGTTGGTCTATGTATGAATCTTCGTAATCTTCTCTGGTACGAGAACACCGACGCTATGAGCTTCTTCCCGAGATGTCACCGACTTGGCGCAGAGGAAGACATTCTAGATTTTGTCGATGATTTCCGGCTGACGTCAGCTGTTGCGCTTGTGCGTTGGGTTGTGCAAAGACATGAGAATGGACGCTCTTCGCACCAGTCTTCCTCAGAGACGGACACCCAGGGTACCCATGACATGGCTGCTCAGAGCGACTCAGACCACAGTCCCAGGAACGTGCTGTCAGTCAGGGCCCTTACGCTTGCACTTGAAGCATGCCGGGAATTTCTGCATTGCAAGGAACATCTTGATATTGATGACACCACGAGCACGAGTTCCTCCATCACGGAAGTCATGTGGGACGAGATCGTCAACTCATCATATCAGCTCCGGAGTGGCGCAGTGATCGCTAATGCCTCTCCTTTTGCGCGAGAATGCCAAAGTACTCTGAACCAGTTAAGAGAGCATCTGCCTCAGTTTGACATCGACGGAGTAAGAAACGTCTGGATTGTGAAGCCTGGGGCCAAGTCACGAGGTCGAGGTATCGTGTGCATGGATAAACTAGAGGATATAATGAAGCTGACAGGCAACATTGTTGGTCAAAAGGAAGGAAGATGGGTGGTACAGAAATACATAGaacgCCCCTTGTTGATCTACGGCGTCAAGTTCGACATTCGTCAATGGTTCCTGGTCACTGACTGGAATCCACTCACTCTCTGGTTTTATGAGGATTGCTATCTACGCTTTTGCAGTCAGAACTTCTCTCTTGAAGACTTCCACGTGAGCATCCATCTTGCTAATAACTccattcaaaagaactacgaTAATAACAGCACTCGCGACAAGAGGCTACCTGATGAGAACATGTGGAGCTCAGACGAGTTCAAGGCCTACCTCAAGAAGCGTGACCTCGGGCACATGTGGGATTCCGTCATCTACCCAGGGATGAAGCAGGGAGTCATGAATGTGCTACAGTCGTGCCAAGAAGTAGTGGAGTGCCGCAAGAACTCCTTTGAGCTATACGGAGCAGACTTTATCATTGGAGTCGACTACAAACCTTGGCTGATTGAGATAAACTGCAGCCCAACCATGGGCGCCAGTACAGCGGTCACCCGCAAATTGTGTGCCCAAGTGTTGGAGGATACAATGAAAGTTATTCTTGATCGGAAAGAAGACAAGAACTGTGGCACTGGAAGATTTGAGCTCGCCTATAAACAGGCTCACGTGAGTGCGCCCCCATACATAGGGATAAACATGTCCGTGGAAGGGACGGGGATATTTCAAAAGACCGCACCCATCAGGCGCTCAAGCTCAGCAAAACTCACGACCCTTGCGAGGCCGCAAGAGAACAAGAAAGGCTTCCCGTCTCCCCAGCAGCAAGAGTCTACAGACATGACATCTAATAACACCAAAGCAACAAGCAACCGAACAACCTTTGTTAAAAAGTACGAGGGCGCCTGGGCAATGGGGTGTATAAGCACCTCTCAAAAGCCCGCCCCATTACCCAGCCATACGCCACGGCCAAGAGAGGACGATAAACCTGCTAGGAAACTGGTCAAGAGTAAAGCAGAGTTTCAGGTCACGAATGGACAGACTCCGCGTGTGTCACGCACTATGACGATACCAAAAGCGGTGTTGCGTTACTCTAGTGAAGCGGGAATGAAGGAGCGGACCCAGTTGCCCATATCTATTGGTCCAGACTCTCGTGGTAACGCATTCTGATCGTCTGGCTTCACGCGTTACGCTACCAGGTCACATAATGAAGACGAGAATCAAGGATCTCTCCGAGAAAAGATTGCTTTAGCGTAGTGGTGTTTAGGGATGTCATAGGCAGATGTATTTAGCTCCACTTAAATTGGCAAATGAAGAAGACAGCGAGGGGGATGGTCAGATACAGAAATATCTATATCGGCTAGACTCAGGAAAGGACTCAAGTGTACGCATATAGTTATTTGGCGTCACACCTTACATATGGCCTGATAGCAAACAGCTTGTCTCTAGTTGTGATTGTGTGCACACTTTCTATGGTATAACTTTGTATTATACACATATTTTATAAGTTTACGTCTCTCAAAGCACTACCAAAACTGTATAAGTCCAACTTCGTCAAATGAAAATTCTTCAATtataaaatgacaaaataaGCTGTTTTGTGGTCAGTATTTAATGgtattttatatattatatgttatagaattttattctattttgttGCATGTTAGAGAATTATATTCTAGTTTTATAGTGTTATAGTGTAAATGGTTGTCTatatattatatgttataGAATTTTATTCTATATTGTTGCGTGTTATAGAATTATATTCTAGTTTTATAGTGTTATTCCAAAAAAGGGATCTGAATATTTAATGGTATTTAAGAATACATATAAACAATAATACATATAGTGTGTGAACCACCATAGAAAGTACCATAGATGTAAAAACGCACGAATTAATATAGTAAATCCCACCACAATGTGGTttaataaaatacattttgtacTTTCCAAGTTTACTGTTCGCAGcggctatatgcccgacagtcggtaaagctcctcaatggactaaaatgcccgacagttttcaatttattcaaataacccaATAAATTGTCGTGAGGacaaagtattctatatttgttgagaaaggggCAAGCAAATTTGAATTGAGATTGTCGGTTTCGAATGTTTTCCTGGGTACCCGAGTATACGTACAGCGTGATTTATGATTTTTGGACGCTGCTATATTTAGGTTTGATACCCCcaccaaaaaatatatatatatatgagcTCTAGAATCTTAAATGCTCCTAAGAAATTCGATGAGAGGAGCTTACGAGAGGTATTTTCTAAAACCTAAGAACACACATCTTCGGATACCCAGGGGTATTTCCCTCTAACGTTTCACTCGCGAGAAAAATAACCCCTTGGGAACAGTAAGGAACAAACTTGGCCAAAAAATTTAGGCCTATGGTGAGCTGTGATTGGTCGACCTCTCGAGGTCGACCAATCACAGGCGCGCTTCGCCTAACAATGCACCAAAAATTTACATAATTGCTCTGTGTTGGCTTGAGATCAAATATGGTTTCTGAACAACTTCTTATATATTCATAGGGCTAATTCTCGACATCATTTCAGCGGTAAAATACACGTTTAGAGCGTCTTCATTGAAGCCAGAACAGCTTTTGGTCCTAAAGGGGTTTTACAATAACAGGATGTTTTTGCTCAACTACCTACAGGGTTTGGAAAGACAAGAGTTTGATTTTTCAAGCCATGCCGGAAATGTGCGAGGGAACCCGATAGTTCTTGTAACTTGTCTTCTCCAGTCGATAATCCGTGACCAGTTGGCCTATCTGAACTCAATCGGGATACGTACCGCCGATATTTCCAACCCAAAGGACACTGACATTCTAGTCAAGGGAAAAGCGGGGATCGTGCTCGGTAGTCCCGATTCATTCGGCAGTGAAGCGGTGAATATATATTACTTGGCACCAAAGTTTAAGCTTACAGAGAGGATGTAGTAGATCCTTGGCTTGAAAAATGTGCAAATAAAGTCCTTAAAGTCAGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2GUB3	Tubulin tyrosine ligase 3 OS=Xenopus tropicalis OX=8364 GN=ttll3 PE=1 SV=1
Q1ECV4	Tubulin monoglycylase TTLL3 OS=Danio rerio OX=7955 GN=ttll3 PE=2 SV=1
A4Q9E5	Tubulin monoglycylase TTLL3 OS=Mus musculus OX=10090 GN=Ttll3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004986 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133 all species →	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051437 all species →	Family	Tubulin tyrosine ligase-like monoglycylase	Interproscan
IPR004344 all species →	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45870 all species →	TUBULIN MONOGLYCYLASE TTLL3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0018094 all species →	Biological Process	protein polyglycylation	Interproscan
GO:0070736 all species →	Molecular Function	protein-glycine ligase activity, initiating	Interproscan
GO:0036211 all species →	Biological Process	protein modification process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16608	TTLL3_8; tubulin monoglycylase TTLL3/8	EC:6.3.2.-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242038.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

39TPM > 0

16Conditions

11.4Max TPM

2.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	3.04	3.39
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	2.42	3.43
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	2.04	2.36
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	4.93	5.60
whole 6 week old aboral regenerate · regenerate uncut	3	3	3.99	6.39
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	2.62	4.41
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	2.26	3.73
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	2.06	2.27
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	2.64	4.63
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	3.41	6.61
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	2.96	4.14
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	5.82	11.36
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	1.76	3.06
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	1.75	3.06
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	2.23	3.55
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.27	3.80

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	3.39
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.95
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	2.77
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.43
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.29
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	1.54
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.36
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.93
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.84
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.60
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.07
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.11
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.39
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	3.43
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.16
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	4.41
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	3.46
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	3.73
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	3.05
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	2.27
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	1.97
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	1.94
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.63
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	3.30
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.61
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	3.61
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.14
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	2.79
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	1.96
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	11.36
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.07
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.02
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.06
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	2.22
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	3.06
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	2.19
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.55
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	3.16
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	3.80
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.