Gene detail

Detailed information of XP_032242128.2 in Nematostella vectensis

Genomic Location: NC_064043.1:3332338...3338220
NR annotation: XP_032242128.2, beta-alanine-activating enzyme isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516405

ATGACCGGGATTAACCAGACGTTGCATTCGCTATTTTTGGACGCAGCTGAGAAATGTCCGGACAACATCGCTCTCACCTACTGCACTAGGGACAATATAGAACACAAAACATACAGACAGCTAGTTGAGGATGCTGATAAAGTAACTTCAAGTCTAATAAAGGTTGTCCAGCACAGTAAGAATGGAGTGATTGGTATATTTTCCAGGCAAAGTCCAGGTCTATTGGAATGCCTAATTGGTGTTCTGCAAATGCCGGCAGCGTTTGCACCTATCGGAACTAGCTGGCCTTCGGCAATGATATGTGAGTTTCTTTCTAATGTGGGAATTGATACAATCCTAGTAGAAGCAAGCCTTCTATTGCAATTTAAAGAGACTCTTCAGAAGTATGATGGCAACTCAAGTGAAAATCATCCAAAGCCATTTAGGATTATCAATGATCAAGCCCTCTCAAGTATTGGATTTACACTGGTAAAGCTCCAAGACATAAAGCAAGAACTGCCAAAGTTGAGTTTGGCTTTTGTAATTCAAACATCTGGAACAACAGGAAAACCGACAACCGTCATGGTGCCACACCAGTGCATAGTCCCCAACATTATCAGCCTGTCTCAGATATTTGCCGTCACACCTGAAGACTCAGTGATAGTGGTATCCCCATATACCTTCGACCCATTTGTTGTCCAGGTATTTCTGGCACTTGAGGCAGGGGCCAGGGCAGTTCTTTTACATGAAACGGATAGGATCTTACCATCAAGACTGTGTTCAGTAATCAAGAGCCAGAATATCACAATCCTTCAGCCAACACCATCCCTCATGAATTACATCGGTCTTGATTTGATAAGGACCAGCCTGCTTGCCCATGATTCACCATTAAGGGTGCTGGCGCTGGGGGGTGAGCCGTTTCCATCGACAAGTGTCCTGTTTCAGTGGAAACACCCTGACTGCACAACTAAAATATTCAACCTCTACGGGATTACTGAAGTCTCAAGCTGGGCAACATGCCAGAAAATCGTGATTTGTTCAAAAGGTGCACAGCAGGTGTCAAAGGATGGAGTGCATCTTTCTGTTGACGAAAGGATTCCAATCGGGGAGCCTCTTCAAGATACACTAGTTGATATAAGAGATGAGGAAGGGAAGAAGATTTCTCATGGCATAGGGCAGATGTATATTGGCGGACATAATCGTATTTGTTTTCTTAACAATGAGATGGATGTTTCACCAGGAACAATGCGCGCATCTGGAGACTGGGCACTGATCAATAATGATCAAATATGGTTCCTTGGCCGGAAAGACCGACAAATAAAGCGATTGGGTCAAAGGACCAACCTACTATGGATAGAGCAAGCACTAGCTAGAGTTTTGCCAAGGCATACATTTGTTGCTGTTGTTGTAAAAAGTAAAGTTAGCTCTGAACAGCAAATGTTTCAACTACCAAAGATGGACCGTCTTCACCTGTTTGTAACATCAAGTGATGACTCATCTTCATGGGATTTGTCTTTTCGAGTTCGGTCTATAATCAAAGATGTCCTTCCAGTTCACGCCCACCCTGATCACATCCATATCGTATCAGACTTACCTCTGACTTCTCACGGTAAAGTTGACATGGAGACTTTACTAGAGGGCATCAGGTCTTATCAACATGTGGAGACGAGTTCTAGAGGACACATCAATAAGATGTGGCTAGAGGCGACAGGGTTTGGCAACAATACTGGCAAATATGCGCCTAGTTCTGAGAAAGACCGCAAGGACGATCTTAAGAAGTCAAGAAGAGAACGAATTACTGAAGGTGATGAAGACTATGACTTGGACACCAGCTCATCATCCCGTCTTACTCTTGTTGAGGCAGGCAGTATGTTTTTAGCAAGTGGGGGGAATTCATTGCAAGCTGTCAAACTAGCGGAAAGTATAACATGGTGGTTGCAAAAGAACAAAAGCGGCAAGTGTTTAGAACTTGACGATTTGTTGGATGTTATCTTGAACAAGCCGTTTGGTGAACTTTGTCGGTATGTCGAGCAAAAATGTTCAGTTTTGCATACTGATGATGAGCGATTGGACAAGGGAGCACACGTGATATCAGAATGGAATGGGAACAGTGGCGTAAGTACAATCAAGGTTGGGAAACTGTCAAGCGGGGAAGATTGTCATCGTCTGCCAGGAAGTGGTGCCCAATTTTCTGTAGGGGAATCCATAACAGATCCTTCAGGGAAACGAAGCTGTTTGCGTAAGCAAGGTTTTAATGTGAAGAGAATAAAGCATGGAGCCACTTCATCAGTGACTGATGTATTTGAGCCAAAGGGTGTTTGCTGCTGTTCTGTACGTAGGGGTGTGCAGATCACAATTTGTAAGCTCTGTGCGGGGTCATCCTCTTCGCAGCCTATAAGTCACAGTGACTGTGTTAGCTACTCTGGAAGACGTCTTGGTAACAGGACTGTACAGCTATCCAAAAAGTGGCGCGCAAATCTTTACAAGTGTACTGACGCATCTCCCCTTGTGGTCGGCTGTAGGGTAGCGGATCTAGATTCTACTGAGAAGGGTTCGGGCGAAGCGGCTCTCTTCCACGTGGAGTCTGGGCTTGTATACGTTGGCTCCCACGCGCACGTGTTCAAAGCTATGCGGCTATCAGACGGTGAAGTTATGTGGGAAACTGAAGTCGGCGATAGAATCGAGTCTTCGGCAGTGTTATCGAGATGCGGGACATGCATTATTTTTGGTTGTTATGACGGGAAGATTTACATCATCAATCGCTTCTCAGGAGTCATCGGGTGGACCTATCAGACACACGCCCCAGTAAAAAGCTCCCCTTGCGTCGACCCTACTACGGGTCTTGTCTGGGTTGGGTCACATGACCACCACCTGTACGCTCTAGATATAACAAATCGTGTAAGCGCATGCGCAATTGACTGTGGTGGCTCATGCTTTAGCTCGCCGCGTCTGAATCCCACATGGGAGAGACTTTTCGCTGCCACACTATCTGGAGTTTTACTTTGCATAAATACTAGCGACATGATGATAGACTGGAGTACTAAGTGCCCAAAGCCTGTTTTTGCTTCTCCTCTTGTGACTGATGTCGGCGTAGTGTGCGGGTGTGTCGACGGTTATTTGTACGCGTTTGATCTAAGCGGAGCTCCTCTATGGAGTCTTGCGACCTCTGGGCCAATATTTAGTTCCCCTGTACTCGCTAGGAGGAGGTCACTTTGCCAGGAAGCCATTGTATTTGGGTGTCACGACTCGCATGTCTATTGCGTTTCTACGCGCGGGGAGCTGGAATGGTCCTTTAAGGCTGATTCTCCCATATACTCTACGCCTTTTATCGTGCCTTTTAATAACATCGTTCAATTGAGAGAGCAGTCCTTTACACCCAATGATATTAGCAAGGTAGTTGGCGTAAAGGTGAGACAAGCAGAGCATTCCTTCTCACCCAATGATATAAGTGATGTAGATGGCAATGTTGAATGCCCCGCCTTTGTACATCTCAATAGTACTTGTAATGAGTCTGTAAGCGAGAACTTTATCTCCACCAAAAGAGACACCTTGGAGGATGAGCTAGTGCTAGTTGCATCTACTCGCGGGACTGTGTACATGTTAACCCTTGACACGGGGTGCTTGCTTGGCTCAATGGCGCTTCCGGGGGAAGTGTTTTCATCACCTGTTATTGGAAGGGGTGCGATATTGATTGGCTGCAGGGATAACTATTTGTACTCCCTCAAGGTTGAGTCGATATGA

Transcript

rna-XM_032386237.2

AtgcaaccacaggaaacccatgaAAACCATATCAAAACGAGAAAAGCAAAACTTCGACGCCAACAAGAAACACGGAAGTctttacaaagaaaacaatataTTTGAATGGGTAAGGATATTCGGTGACAGATTTCTGGTCTTTCGATTGCACGAGAGGTACGTTTTGGCTCTCAAATCTTTTAAAAGAGAAGAGTCCCgcgttttattttgttatgacCGGGATTAACCAGACGTTGCATTCGCTATTTTTGGACGCAGCTGAGAAATGTCCGGACAACATCGCTCTCACCTACTGCACTAGGGACAATATAGAACACAAAACATACAGACAGCTAGTTGAGGATGCTGATAAAGTAACTTCAAGTCTAATAAAGGTTGTCCAGCACAGTAAGAATGGAGTGATTGGTATATTTTCCAGGCAAAGTCCAGGTCTATTGGAATGCCTAATTGGTGTTCTGCAAATGCCGGCAGCGTTTGCACCTATCGGAACTAGCTGGCCTTCGGCAATGATATGTGAGTTTCTTTCTAATGTGGGAATTGATACAATCCTAGTAGAAGCAAGCCTTCTATTGCAATTTAAAGAGACTCTTCAGAAGTATGATGGCAACTCAAGTGAAAATCATCCAAAGCCATTTAGGATTATCAATGATCAAGCCCTCTCAAGTATTGGATTTACACTGGTAAAGCTCCAAGACATAAAGCAAGAACTGCCAAAGTTGAGTTTGGCTTTTGTAATTCAAACATCTGGAACAACAGGAAAACCGACAACCGTCATGGTGCCACACCAGTGCATAGTCCCCAACATTATCAGCCTGTCTCAGATATTTGCCGTCACACCTGAAGACTCAGTGATAGTGGTATCCCCATATACCTTCGACCCATTTGTTGTCCAGGTATTTCTGGCACTTGAGGCAGGGGCCAGGGCAGTTCTTTTACATGAAACGGATAGGATCTTACCATCAAGACTGTGTTCAGTAATCAAGAGCCAGAATATCACAATCCTTCAGCCAACACCATCCCTCATGAATTACATCGGTCTTGATTTGATAAGGACCAGCCTGCTTGCCCATGATTCACCATTAAGGGTGCTGGCGCTGGGGGGTGAGCCGTTTCCATCGACAAGTGTCCTGTTTCAGTGGAAACACCCTGACTGCACAACTAAAATATTCAACCTCTACGGGATTACTGAAGTCTCAAGCTGGGCAACATGCCAGAAAATCGTGATTTGTTCAAAAGGTGCACAGCAGGTGTCAAAGGATGGAGTGCATCTTTCTGTTGACGAAAGGATTCCAATCGGGGAGCCTCTTCAAGATACACTAGTTGATATAAGAGATGAGGAAGGGAAGAAGATTTCTCATGGCATAGGGCAGATGTATATTGGCGGACATAAtcgtatttgttttcttaacaATGAGATGGATGTTTCACCAGGAACAATGCGCGCATCTGGAGACTGGGCACTGATCAATAATGATCAAATATGGTTCCTTGGCCGGAAAGACCGACAAATAAAGCGATTGGGTCAAAGGACCAACCTACTATGGATAGAGCAAGCACTAGCTAGAGTTTTGCCAAGGCATAcatttgttgctgttgttgtaaAAAGTAAAGTTAGCTCTGAACAGCAAATGTTTCAACTACCAAAGATGGACCGTCTTCACCTGTTTGTAACATCAAGTGATGACTCATCTTCATGGGATTTGTCTTTTCGAGTTCGGTCTATAATCAAAGATGTCCTTCCAGTTCACGCCCACCCTGATCACATCCATATCGTATCAGACTTACCTCTGACTTCTCACGGTAAAGTTGACATGGAGACTTTACTAGAGGGCATCAGGTCTTATCAACATGTGGAGACGAGTTCTAGAGGACACATCAATAAGATGTGGCTAGAGGCGACAGGGTTTGGCAACAATACTGGCAAATATGCGCCTAGTTCTGAGAAAGACCGCAAGGACGATCTTAAGAAGTCAAGAAGAGAACGAATTACTGAAGGTGATGAAGACTATGACTTGGACACCAGCTCATCATCCCGTCTTACTCTTGTTGAGGCAGGCAGTATGTTTTTAGCAAGTGGGGGGAATTCATTGCAAGCTGTCAAACTAGCGGAAAGTATAACATGGTGGTTGCAAAAGAACAAAAGCGGCAAGTGTTTAGAACTTGACGATTTGTTGGATGTTATCTTGAACAAGCCGTTTGGTGAACTTTGTCGGTATGTCGAGCAAAAATGTTCAGTTTTGCATACTGATGATGAGCGATTGGACAAGGGAGCACACGTGATATCAGAATGGAATGGGAACAGTGGCGTAAGTACAATCAAGGTTGGGAAACTGTCAAGCGGGGAAGATTGTCATCGTCTGCCAGGAAGTGGTGCCCAATTTTCTGTAGGGGAATCCATAACAGATCCTTCAGGGAAACGAAGCTGTTTGCGTAAGCAAGGTTTTAATGTGAAGAGAATAAAGCATGGAGCCACTTCATCAGTGACTGATGTATTTGAGCCAAAGGGTGTTTGCTGCTGTTCTGTACGTAGGGGTGTGCAGATCACAATTTGTAAGCTCTGTGCGGGGTCATCCTCTTCGCAGCCTATAAGTCACAGTGACTGTGTTAGCTACTCTGGAAGACGTCTTGGTAACAGGACTGTACAGCTATCCAAAAAGTGGCGCGCAAATCTTTACAAGTGTACTGACGCATCTCCCCTTGTGGTCGGCTGTAGGGTAGCGGATCTAGATTCTACTGAGAAGGGTTCGGGCGAAGCGGCTCTCTTCCACGTGGAGTCTGGGCTTGTATACGTTGGCTCCCACGCGCACGTGTTCAAAGCTATGCGGCTATCAGACGGTGAAGTTATGTGGGAAACTGAAGTCGGCGATAGAATCGAGTCTTCGGCAGTGTTATCGAGATGCGGGACATGCATTATTTTTGGTTGTTATGACGGGAAGATTTACATCATCAATCGCTTCTCAGGAGTCATCGGGTGGACCTATCAGACACACGCCCCAGTAAAAAGCTCCCCTTGCGTCGACCCTACTACGGGTCTTGTCTGGGTTGGGTCACATGACCACCACCTGTACGCTCTAGATATAACAAATCGTGTAAGCGCATGCGCAATTGACTGTGGTGGCTCATGCTTTAGCTCGCCGCGTCTGAATCCCACATGGGAGAGACTTTTCGCTGCCACACTATCTGGAGTTTTACTTTGCATAAATACTAGCGACATGATGATAGACTGGAGTACTAAGTGCCCAAAGCCTGTTTTTGCTTCTCCTCTTGTGACTGATGTCGGCGTAGTGTGCGGGTGTGTCGACGGTTATTTGTACGCGTTTGATCTAAGCGGAGCTCCTCTATGGAGTCTTGCGACCTCTGGGCCAATATTTAGTTCCCCTGTACTCGCTAGGAGGAGGTCACTTTGCCAGGAAGCCATTGTATTTGGGTGTCACGACTCGCATGTCTATTGCGTTTCTACGCGCGGGGAGCTGGAATGGTCCTTTAAGGCTGATTCTCCCATATACTCTACGCCTTTTATCGTGCCTTTTAATAACATCGTTCAATTGAGAGAGCAGTCCTTTACACCCAATGATATTAGCAAGGTAGTTGGCGTAAAGGTGAGACAAGCAGAGCATTCCTTCTCACCCAATGATATAAGTGATGTAGATGGCAATGTTGAATGCCCCGCCTTTGTACATCTCAATAGTACTTGTAATGAGTCTGTAAGCGAGAACTTTATCTCCACCAAAAGAGACACCTTGGAGGATGAGCTAGTGCTAGTTGCATCTACTCGCGGGACTGTGTACATGTTAACCCTTGACACGGGGTGCTTGCTTGGCTCAATGGCGCTTCCGGGGGAAGTGTTTTCATCACCTGTTATTGGAAGGGGTGCGATATTGATTGGCTGCAGGGATAACTATTTGTACTCCCTCAAGGTTGAGTCGATATGACTCCAAAGCTAACGAAAACATGAACGTCCTTGGATGATGCATATCTTAATTATGTTTCATGGGGGTAGATCTTTTTATTGCGGTGTGTTGGTGGAGGTGCATCGTCGGATCACTCATGTGTAAACTTCCGGTGTGTAAACTTCCGGTTAACTTTTGTTGGATGGTCCATCgatcatccgtaaactttttgtggtctttctgtgctcTTGCAACACAGCAATCCTTAGATCATATAAACTTCCAGTGttcaacttccggttaaagcCTAGTACTGTAAAAGGGCTTCGTCATAGAACTGTGGTCCTCTACGGTCGCTGCCTAGTATGACTGTAAAGTATATACTagaagtttctaatagaaagtgaATGCTCGGGGGACGGGACGAACATGTTTCAGTACAGGGGTTCTCGAAAAAGACCGCTGGTCAGCATGAAaccaaaatacaaatcagccgactgggaagcctgtggtgtggacacgaaaagctgcatccactatatgaaactcgcgcatgcgttaaaaagaccgctgatccgcatgaaataaaaacacaaataagccgactgggaagcctgtggtttGGACACAAAAAATTGCATCcactatatgaaactcgcgcatgcgctaaaaagACCACTGATCAGAAtacaatcaaaatacaaatcagccgactgggaaacctgtggtgtggacacgaaaaatcgcatccactatatgaaactcgcgcatgcgccaaAAAGACTGCTTAGAAATTGTCTAGAATAAATTTTCTCCTCTACGATGATATTTTTGGAGATATAGGGGTTATTTGCCCAAAAGACttagcagttttattatttcacatATCATTAACCTCATTGAGACTAATCATTCGATACCAATTATGGCAGTtactgttgctatggtaaccaAGCCACACCCAAAATACATGATTTTAATGCTCTTACGGTAACAGCTCTAGCTCTGAAACTATAATTGGAACACAAACCAAACTAAGGATATTCATTGCTAATACCTCAAACTATGTAATGAACCTAAAATTGCTATATAGTTGACATAAATGGAAAATTAtcaagtaaacaaacaaaaagcttaTAATTTTAACCAGCATTCTTTGGTAAAAAGCCTTCATATTACTAAGCATTGTAAAAATTTCAAGGTTTTTGAGGTTCATTACACTACTACAATATCAATAATTATTCCTGCCAAATTTCatgcaataatattaaaaacacaGGAACTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4L235	Beta-alanine-activating enzyme OS=Homo sapiens OX=9606 GN=AASDH PE=1 SV=3
Q80WC9	Beta-alanine-activating enzyme OS=Mus musculus OX=10090 GN=Aasdh PE=1 SV=1
Q5RG49	Beta-alanine-activating enzyme OS=Danio rerio OX=7955 GN=aasdh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004449 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan
PF13570 all species →	PQQ_3	PQQ-like domain	Repeat	Interproscan
PF13360 all species →	PQQ_2	PQQ-like domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR002372 all species →	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR052091 all species →	Family	Beta-alanine Activation and Resistance	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR018391 all species →	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44394 all species →	BETA-ALANINE-ACTIVATING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0043041 all species →	Biological Process	amino acid activation for nonribosomal peptide biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00142	AASDH; acyl-CoA synthetase	EC:6.2.1.-	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242128.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

33TPM > 0

16Conditions

1.8Max TPM

0.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	2	0.93	1.82
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	0.70	0.88
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	0.98	1.27
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	0.77	0.89
whole 6 week old aboral regenerate · regenerate uncut	3	3	0.81	0.99
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	0.29	0.88
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	0.58	1.08
whole 6 week old aboral regenerate · regenerate 36hpa	3	2	0.46	0.89
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	0.57	1.07
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	0.54	0.83
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	0.60	0.72
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	0.50	0.80
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	0.67	1.18
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	0.39	1.17
whole 6 week old aboral regenerate · regenerate 8hpa	3	1	0.25	0.75
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.33	0.98

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	1.82
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.97
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	0.00
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	0.88
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	0.69
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	0.52
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	1.27
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.86
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.81
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.89
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.73
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.70
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.99
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.86
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	0.58
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.88
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	1.08
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.66
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.89
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.49
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.00
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	1.07
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.64
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.83
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.78
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.72
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.58
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.52
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.80
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.70
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	1.18
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.84
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	1.17
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.75
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.98
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.