Gene detail

Detailed information of XP_032242247.2 in Nematostella vectensis

Genomic Location: NC_064043.1:2473830...2489858
NR annotation: XP_032242247.2, sterol regulatory element-binding protein 1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516451

ATGGCGGACCAGAGAAATGAGTACTGGTCTTCTATAATGGACAATCCCATACCCGGGTTGGATCAAAACATCAATAGAGATGCGAATATGAGCGAGGCGTTAGATGACTTTGACGACATTGTGTCTTACATCTGCTCCAACCAGAACAATACCTCCATGTCTGAGGATGGATTACTAGCCAACATCAAGACTGAACCAGTAAATAATTTGACACCACCTTATACACCTCCGGATATGATGGACTCCAGCCAAGATGATGTGATGTCAGAAGACATAGATGCATACCTGATGCAATACCAGCATCAGGACCCGATGCTGTCAGCATTTCCATCGCCGCCACATGACAGCTATGCTGAGCAGAAGCCAGTGATCAAACAGGAAGGCCCTGGGTCTCATGTTAGTATTGGGAACCTCAATGCTTCACAGATGCTGCAGCTGTTGCAAGCGGAAAAGATGTTACAAGAACAACAATCCCTGCAGCAGCAGCAACAGTCTTCACACTTGCAACAACAAACTTTACAATCGCAACAGCAGTCTCCACTGCAGCAATCTCAGTTGTCAGACAAGTCATTGGCAGACTTGCTTCAAGAGCCTTCAAAATTGTCAGGACAAAACATTTCCCAAGCTGGACCTCAGCAACCACTTCTTGCCAGTAATCAACAGCTTCAAATACTCCAACTGTTGCTGAAATGCCAACAACAGAAGGAACAGCAACAACAAAAAGCACAGATACTTCAACAACAGAAACTTCAGAATGCAACTATGGCAAATCAAACTAGTCAGCTGCAGCAACTATTGAACCAAGTTATCAAGACAACAACAACAACTAGTAATGCAGGCATGCCTACTGTTATGACAGCCATGCCAAGCTCACCGTTGTCTCAGGCTCAGAGTCCAGGCTCGTCAGCTAGCCAGCAGTTCTCACCCAGCCCATCAGCGTCACCTGGAGGGGCGTCAAGCACAACCTTGTCAAATCCTGCCTCACCACAACAGCCTCAGTCACCCAATTTGCTGACAATGTCAACCTTTTCTTCACAATCTCAGGTGATCCATCTCCCGCCGCAAATAGTGAATTCAGACTCCACTGTGCTTCATGTCAAGGCAGCCAATAACGGCAACCAGGTCATTACCATCCCAGTAGTATTTGACCCTTGCAAGATACCCATCGCTCGTGTACCAACCACACCCCCTAAAACTGATATCAACGCCAAAGGTAACCGGTCCAATCACAATGAGATTGAGAAGCGCTACAGGAATAGCATCAACAATAGGATTAATGAGCTGAAGGACCTTGTGTGCGGCCCAGAAACTAAGATGAACAAGGCAGGCATTTTAAAGAAGGCACTTGACTACATCAGATATCTTCAGAGGGAGAATGGCCGGCTTAAAGAGGAAAACACTGCTCTGAAAGTAGCCCAGCATCAGCAAAATACCATCACAGAGATGATTAAGCTGCAGCAAGACCATAACAAAAGTACAACCCCAACACAAGAGAGCCTGGACGGAAGAAACAGTCCGCAGCAGATGAGCCCAGAGTCTAGTGCCCTCCTCTCGCCGGCATCTATTAGCCCTGTGCCGTCACCAGAGGCCGCCCCACATCCTAAGCCAACCAAGATTGAAGGACTGTCTTTCTCAAGCTGCGGCATGTTGGACAGGACAAGAGTGGCTCTTTGCACTTTCTTATTCTCTTTTCTCCTTATTAGTCCCATAAACTTCCTGCTTCCCCAGCTAGCATCTGATTCCATCTTGTCTTCAAGTTTTGGTGATTCCCCTAATCCTCATGATGGTACTCGTGTTTTGAACTCAGTCGACGCCCCTTTTGACCCCTTGACAGTGATCTCTTGGGCAGCACTTGTTGCGTTTAAGTGGCTCCTTAACGTAGCACTGCTAATAGGAGTTCTCGTCAAGATTTTTGTGTTTGGAGAGCCTGTTACAAGGCCACATTCAGACAGGTCAACACTCTTCTGGCGACACAAGAACCAAGCAGATCTTGACCTATCAAGAGGAGACAACATTTCTGCAGCAAGACAGCTAGAAATTTGCTTGCGGGTTCTGGGACGTCCCATGCCAACTTCCAAGCTAGATGTGTTTTGTGGATTTGTGTGGCATTCTCTCAGGCACATCTTGTTCAGGCTTGGTATTGGCACATGGCTGGCCTCAACAGCATGCGGTGTGTTCTTCAGAAAAGCCAGCGAGGATATCCGCAAGGAGTATGACAAGGTTAATGCTCGTGATGCGGCACTTGTCTGCCACAAGCTTCACCAGCTCAGTCTGACAGGCTATGTGCCAAGAGGCTACTGGCGCTCAAGCGTACTTGGCCTCTCTGCTATCAATCTGGCTGAGACTGCGGGTAGTTACATCAGTGCCCAAGTCAAGGCCCAGATGTATGTGACAGCTGCTGTTCAGATCAGGTCTGCATTACCAGAAGGGCTACACTTTGTTGCTCGCTACTTCCTTCTCCGTGCAAGGGACACTTTAACAGCAAACGGGGCTACCATCCCTCCCTCCATGCAGTGGCTCTTCACACCTCAGGGACACAGGTTTTTCGTCAGCAGCAGCTGGTCTTGCAAGGGCGGGGACAGTATGTGGGCCAGTGTTGCAAACCATGCCGACCCTGTTGCTCATGTTAGCCAAGCATTCCGAGAGCAGATGCTGAAAGAAGCACTAACTGCCATTGCCTTACCCAAAGATACCCTGCCTAATAAAGATGCTAACACCCAGGACACAACAGGAAGCTGGGTAGACGGCCTGAACTTCCTTGACATCCTACACGTCTGCGCTGAGGTCACAGAGGAACCAAAGGAGGGTCCTGCCAATGGCCTCGTGGGTAGCATGGGGGCGGGGTGTGGCCGTAATGGTGATGAGGTGGCCAGGTGGTGGGCAGCTGTGGGGTCGGTGGCGGTGCACTGGTTTCGTGGTGAAGATGAGGCTGCTGAGAGGTTCTATAACACTGTGGGAAGTGTGCCCAAGTGCCTTTGGAATGCTGAAGACCCTGTAGCTAACTGCAGAGAGCCTATTGCAAAAGCCTTGCTTCGGGCATTCAAGGCAAGAAAAGAAATTCTCAACTCCAAGCATCTCACACCCGAAAAGGCAGAAGAATGCCGTCAGCTCTGCAACAAGTCTGGCATGCACCTCCGCGAGAGCATCAGCCTGGCTTCCTATCAATCTGCAAGTAAGCTACGTCAACTTGCCCAGCTCCTTTGCTGTGATTGGCTGTTGGCGACACGAACCGACATCTGGGAATCCAATAACAAGCCAGATGTTCAGCACAAGGTCATAGACTCTGTAGGACTGGCGGCATTCCAGCACGACCTTGAAAGTCTGAGGAAAATAACACATGATCTTCAGGCGGCTCTACCTAGGATGTATCTTTATGAAGCAGTAGCTCGACTCATGGCTGGTGCCAACCCCACCCAGACACAGCAGCTGTTGCAGAGAACAACACTTCGGCAACGAATTGTTGTTAGTAAGGATGATTATTGTTATAACCACACAGAAGAACTAGAGGAGTGTGTGACAGGCGGGCGTGAACGTGCCACTGCGTTACTGATGGCATGTCGACACCTCCCCAACCCCTTTCTGTCTGCCCCAGGCCAGCGCAAAGGCATGCTTCTGGAGGCAGCAAGCTGCTTGGAGAAGATGGGCGACAAGCGGACGCTCAAAGACTGTCACCAGTTATTGCTTCAACTAGGTACCGTCTCTGCTGCTGACTGA

Transcript

rna-XM_032386356.2

GCAGATCTGCTGAAAAAGAAGCAACAAACGCTAAGGTCTGCCAAAATGGCGGACCAGAGAAATGAGTACTGGTCTTCTATAATGGACAATCCCATACCCGGGTTGGATCAAAACATCAATAGAGATGCGAATATGAGCGAGGCGTTAGATGACTTTGACGACATTGTGTCTTACATCTGCTCCAACCAGAACAATACCTCCATGTCTGAGGATGGATTACTAGCCAACATCAAGACTGAACCAGTAAATAATTTGACACCACCTTATACACCTCCGGATATGATGGACTCCAGCCAAGATGATGTGATGTCAGAAGACATAGATGCATACCTGATGCAATACCAGCATCAGGACCCGATGCTGTCAGCATTTCCATCGCCGCCACATGACAGCTATGCTGAGCAGAAGCCAGTGATCAAACAGGAAGGCCCTGGGTCTCATGTTAGTATTGGGAACCTCAATGCTTCACAGATGCTGCAGCTGTTGCAAGCGGAAAAGATGTTACAAGAACAACAATCCctgcagcagcagcaacagtCTTCACACTTGCAACAACAAACTTTACAATCGCAACAGCAGTCTCCACTGCAGCAATCTCAGTTGTCAGACAAGTCATTGGCAGACTTGCTTCAAGAGCCTTCAAAATTGTCAGGACAAAACATTTCCCAAGCTGGACCTCAGcaaCCACTTCTTGCCAGTAATCAACAGCTTCAAATACTCCAACTGTTGCTGAAATGCCAACAACAGAAggaacagcaacaacaaaaagcacaGATACTTCAACAACAGAAACTTCAGAATGCAACTATGGCAAATCAAACTAGTCAGCTGCAGCAACTATTGAACCAAGTTATcaagacaacaacaacaactagtAATGCAGGCATGCCTACTGTTATGACAGCCATGCCAAGCTCACCGTTGTCTCAGGCTCAGAGTCCAGGCTCGTCAGCTAGCCAGCAGTTCTCACCCAGCCCATCAGCGTCACCTGGAGGGGCGTCAAGCACAACCTTGTCAAATCCTGCCTCACCACAACAGCCTCAGTCACCCAATTTGCTGACAATGTCAACCTTTTCTTCACAATCTCAGGTGATCCATCTCCCGCCGCAAATAGTGAATTCAGACTCCACTGTGCTTCATGTCAAGGCAGCCAATAACGGCAACCAGGTCATTACCATCCCAGTAGTATTTGACCCTTGCAAGATACCCATCGCTCGTGTACCAACCACACCCCCTAAAACTGATATCAACGCCAAAGGTAACCGGTCCAATCACAATGAGATTGAGAAGCGCTACAGGAATAGCATCAACAATAGGATTAATGAGCTGAAGGACCTTGTGTGCGGCCCAGAAACTAAGATGAACAAGGCAGGCATTTTAAAGAAGGCACTTGACTACATCAGATATCTTCAGAGGGAGAATGGCCGGCTTAAAGAGGAAAACACTGCTCTGAAAGTAGCCCAGCATCAGCAAAATACCATCACAGAGATGATTAAGCTGCAGCAAGACCATAACAAAAGTACAACCCCAACACAAGAGAGCCTGGACGGAAGAAACAGTCCGCAGCAGATGAGCCCAGAGTCTAGTGCCCTCCTCTCGCCGGCATCTATTAGCCCTGTGCCGTCACCAGAGGCCGCCCCACATCCTAAGCCAACCAAGATTGAAGGACTGTCTTTCTCAAGCTGCGGCATGTTGGACAGGACAAGAGTGGCTCTTTGCACTTTCTTATTCTCTTTTCTCCTTATTAGTCCCATAAACTTCCTGCTTCCCCAGCTAGCATCTGATTCCATCTTGTCTTCAAGTTTTGGTGATTCCCCTAATCCTCATGATGGTACTCGTGTTTTGAACTCAGTCGACGCCCCTTTTGACCCCTTGACAGTGATCTCTTGGGCAGCACTTGTTGCGTTTAAGTGGCTCCTTAACGTAGCACTGCTAATAGGAGTTCTCGTCAAGATTTTTGTGTTTGGAGAGCCTGTTACAAGGCCACATTCAGACAGGTCAACACTCTTCTGGCGACACAAGAACCAAGCAGATCTTGACCTATCAAGAGGAGACAACATTTCTGCAGCAAGACAGCTAGAAATTTGCTTGCGGGTTCTGGGACGTCCCATGCCAACTTCCAAGCTAGATGTGTTTTGTGGATTTGTGTGGCATTCTCTCAGGCACATCTTGTTCAGGCTTGGTATTGGCACATGGCTGGCCTCAACAGCATGCGGTGTGTTCTTCAGAAAAGCCAGCGAGGATATCCGCAAGGAGTATGACAAGGTTAATGCTCGTGATGCGGCACTTGTCTGCCACAAGCTTCACCAGCTCAGTCTGACAGGCTATGTGCCAAGAGGCTACTGGCGCTCAAGCGTACTTGGCCTCTCTGCTATCAATCTGGCTGAGACTGCGGGTAGTTACATCAGTGCCCAAGTCAAGGCCCAGATGTATGTGACAGCTGCTGTTCAGATCAGGTCTGCATTACCAGAAGGGCTACACTTTGTTGCTcgCTACTTCCTTCTCCGTGCAAGGGACACTTTAACAGCAAACGGGGCTACCATCCCTCCCTCCATGCAGTGGCTCTTCACACCTCAGGGACACAGGTTTTTCGTCAGCAGCAGCTGGTCTTGCAAGGGCGGGGACAGTATGTGGGCCAGTGTTGCAAACCATGCCGACCCTGTTGCTCATGTTAGCCAAGCATTCCGAGAGCAGATGCTGAAAGAAGCACTAACTGCCATTGCCTTACCCAAAGATACCCTGCCTAATAAAGATGCTAACACCCAGGACACAACAGGAAGCTGGGTAGACGGCCTGAACTTCCTTGACATCCTACACGTCTGCGCTGAGGTCACAGAGGAACCAAAGGAGGGTCCTGCCAATGGCCTCGTGGGTAGCATGGGGGCGGGGTGTGGCCGTAATGGTGATGAGGTGGCCAGGTGGTGGGCAGCTGTGGGGTCGGTGGCGGTGCACTGGTTTCGTGGTGAAGATGAGGCTGCTGAGAGGTTCTATAACACTGTGGGAAGTGTGCCCAAGTGCCTTTGGAATGCTGAAGACCCTGTAGCTAACTGCAGAGAGCCTATTGCAAAAGCCTTGCTTCGGGCATTCAAGGCAAGAAAAGAAATTCTCAACTCCAAGCATCTCACACCCGAAAAGGCAGAAGAATGCCGTCAGCTCTGCAACAAGTCTGGCATGCACCTCCGCGAGAGCATCAGCCTGGCTTCCTATCAATCTGCAAGTAAGCTACGTCAACTTGCCCAGCTCCTTTGCTGTGATTGGCTGTTGGCGACACGAACCGACATCTGGGAATCCAATAACAAGCCAGATGTTCAGCACAAGGTCATAGACTCTGTAGGACTGGCGGCATTCCAGCACGACCTTGAAAGTCTGAGGAAAATAACACATGATCTTCAGGCGGCTCTACCTAGGATGTATCTTTATGAAGCAGTAGCTCGACTCATGGCTGGTGCCAACCCCACCCAGACACAGCAGCTGTTGCAGAGAACAACACTTCGGCAACGAATTGTTGTTAGTAAGGATGATTATTGTTATAACCACACAGAAGAACTAGAGGAGTGTGTGACAGGCGGGCGTGAACGTGCCACTGCGTTACTGATGGCATGTCGACACCTCCCCAACCCCTTTCTGTCTGCCCCAGGCCAGCGCAAAGGCATGCTTCTGGAGGCAGCAAGCTGCTTGGAGAAGATGGGCGACAAGCGGACGCTCAAAGACTGTCACCAGTTATTGCTTCAACTAGGTACCGTCTCTGCTGCTGACTGATAGAAATAGACACAGCTACAATCACACAGTCTGCCGCCAACTGATAGCAATAGGACCAGCTACAATCACACTACAGTCTGCCACCAACTGATAGCAATAGGACCAGCTACTATCAGACTTGTAGAAAAGTAGATCACCAGGCAAATACAGCATATTTGGTATCTACACTCATAGCATCCTGACTCATTGCAGTCAGCCCTGTGATTACAGCAATAGTCTATGGTATTGTCTTGTGAATTGGTGAGTTCAGTAGGGTTGTTGCAGCTTTTCTTAGACGTGGAGATTTTGCAGATCTGGTTGCAGATAACAATATTTTCTACATTTGGTCACAGAACCCCCACACAACAAAACTGTTTGACCATTCCAGATCTGAAGCCATAGGGtagccccctccctcccaagGACTCTCAACTAAAGAAACTATAATACCACTGCAACCTAGGATGGGTACATTTTGTTTCTCTGAGATAAATGAAATGCTAGAGGAAGAGGGCCCACCCCCTTTCCCACCCAGCCCTGTAATATAATATGTGTCTCAATTGCAATAATTATGCAACTAAACAGTCCATGGTACTGTGTTGTGAATCGGTGTCTTTAGTAGGGTTGTTGCAGTAGGATTTAGCTCTTCTTAGACATGGAGATTTTGTAGATCTGGTTGCAGATAACAATATTTATAGTTAAGAGTCTGTATGGTACATATTCTAAGAACGCATTCTTAGTATTGTAACTTGGATAAGACCTGATTGAAAAGCTTTGTAAGTGTATTGTGCTGTCAGCAAGTGttgttttaaaatgtttataaTATTTACGTCACTATTTAGCTATGCATCTTGCAAGGTGGAGAGGCGTCAGTTCTGCTACGTTGGTGATGTCAGGCATCATACATCCATTTATCTTAGTGTCAGATACATAATGACGCTCTAGAGTGCATGGATTTAACCCATGAAACTATCACAGAATATTATTACAAAATGTTTACTCTAAAATAACTTGATTTTCTACTTGACTGTAGAGGTTCTTACCATCTTCATCATTAATcacatttttaaattaaatctCTGCCAAAATTTTACAGCAATTCAACTGTTTTGGGTTTGATGTGTGCTctctatttctttatttatcaGCGATATtgtatttcatatttttttttaatttaaatatGAGAATTATTTGTATGTAAAAATGCCTCTACATTAATATTcaaattgctttttgtttgaaaCAATTCTTGATTAACACTACATAATTCCCTCACATTTCTTTACGCAGGGATAAAGGTGGGTTTAAATGTAGACGCCTAACCTTTCAGTGCCAGTGAGTAAAAGGATCTAACATAAAAACATGCAACAAAGTCttgatttttcttgttttatggATGTTCAcgtcatgtgtgccccaactTGGGTATATTCCACAATTTCTTTCATTAATTTATTCTGTACTTTGTAGGTTTAGTTGTCAATGAACTGCTTTAGTCAGTTTGTAAaatcattctggtacatcaaGACAAGAATGCTTATATGAAACATTACTTTACTTAAAAAAGTTGATAATTATACATAATGATGTTTTGTAGAAACTGAAATAAACATAATCAATAATGATCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P36956	Sterol regulatory element-binding protein 1 OS=Homo sapiens OX=9606 GN=SREBF1 PE=1 SV=2
Q9WTN3	Sterol regulatory element-binding protein 1 OS=Mus musculus OX=10090 GN=Srebf1 PE=1 SV=4
O97676	Sterol regulatory element-binding protein 1 OS=Sus scrofa OX=9823 GN=SREBF1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005329 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46062 all species →	STEROL REGULATORY ELEMENT-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032242247.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242247.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

46TPM > 0

16Conditions

40.2Max TPM

25.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	27.96	33.21
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	19.70	28.40
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	23.60	27.86
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	31.34	36.57
whole 6 week old aboral regenerate · regenerate uncut	3	3	20.62	23.60
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	19.40	29.31
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	27.30	30.73
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	26.13	28.96
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	27.94	34.13
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	30.88	33.22
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	26.52	28.62
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	28.41	32.34
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	25.39	26.42
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	17.64	31.75
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	21.78	25.92
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	31.18	40.23

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	33.21
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	28.56
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	22.11
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	28.40
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	16.73
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	13.96
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	27.86
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	21.80
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	21.15
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	36.57
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	32.15
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	25.30
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	23.60
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	21.58
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	16.67
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	29.31
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	28.88
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	30.73
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	29.19
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	21.97
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	28.96
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	27.88
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	21.55
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	34.13
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	25.42
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	24.29
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	33.22
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	30.57
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	28.85
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	28.62
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	27.48
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	23.47
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	32.34
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	30.30
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	22.60
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	26.42
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	25.96
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	23.80
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	31.75
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	21.16
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	25.92
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	24.81
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	14.61
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	40.23
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	31.42
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	21.90

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.