Gene detail

Detailed information of XP_032242249.2 in Nematostella vectensis

Genomic Location: NC_064043.1:2463969...2473557
NR annotation: XP_032242249.2, sterol regulatory element-binding protein 1 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516503

ATGGCTAACAACTGGCAAAATACACCCGGTGTTGACACTACAAAGAAAATGGATTCATCCCTTGCTAATGGAGAGCTTTCACTTGATTTTATGGGAATCCCTCAACAAATATTGTTAGAAATGGAGAAATATTTAATGCCCCACCTTACAGATGAAATGCTTTCTGTTTTGCCTGGGGCCACTAAGCAGGAGCCCCAGCAGTCATCTCTACGCGACCTGCTACAAGACTCACAGCCATTCAGTTCAGGGAAAGCCCCCACAAACGGTGGAAGTGAAGAGGAACTTTTATCAACTGAACAGCAACTCCAACTCGTTCAGCTTCTTCTCAAATCAACCACTGAACAGCAAAACCAGCAAACACAAAATCCACAGTGTCTACCGAATGAGTCCATCCAACATCTTCTCAGGCAGATTATATCAGCACAAGTTGGCAGCTTCCAGAACAACGTTACCCATGCCAAGCCCAGTAGTCCAGAGACTCCTGTCGTAGAGCTCAAAACTGCTGCCGATGGTAGTCCATTTATATCTATCCCAACTTCTGTGTTGCTGAGCCATAACGCTGCACCTGAAAATGCAGAGGACAAATCTAACACAAGAACTAGAGGGAAACAGATTAGGAGCTATTCTCACAATCAGATTGAGAAAAGATACAGGGATAAGATTAGCAACAAAATGAATGAACTAAAGGATGTGGTTTGTGGACCAGAGGCAAAGTTGCACAAAGAAACGGTTCTAAGAAAAGCAGTTGATAAAATTCGCCATCTTGAGAAGGAAAACACTCGGTTGCGTCAGGAAGTTGACAATCTCAGAAAAATGCAACAGCAAACTGATACCTTGTCACAGTTCATTAGGCTTCAATCCACCAACCTTAAGCCTGGGGACAAGGATATTCAACCAAGTTTGTCTGTCAAAAGAGAGCCGACCAGTGATGATACTCAACAATTATCATCATCATCATCAACTAGTTTAGGAGATTCAAATACCAGACAGCCCCCAGAGATCAAGTCTGTTATCTCAGAGGGCATGCAGTGTGATGGGTGTGCTCTGAAAGACAGAACTAGAGTCGCTCTGTGTTCATTCCTCATCATTTTCCTGTTTTTTAGCCCACTGAACTTGCTATTACCAATGTCTAGATCAGAGTCTATGCTTCATTCAGCAAGCTCATACTTTAGACCTCATGGCGGAAGCCGCACCTTGAGCTCGATTGACACCAACTATCAGACATCAGCTATGATCTCTTGGGCAGTGATCATGGGTCTAAAGTGGTTTGTCAATATCATCCTGGTGATCGGGGTGCTTGTCAGAATCTTTGTATTTGGTGAGCCTGTGACAAGGCCAAACTCTGAGAGAGCCACTCTTTTCTGGAGGCATAAGAACAAGGCTGACATTGCGCTGTCACAGGGTAGTAACCTTGTAGCAGCAGAGCATCTTGAGGTGTGTCTACGAGTTCTTGGCCGTCCAACACCGCACACTAAACTGGATGTATTTTGTGGTGTGGTCTGGCATTGTTTACGGCATGCACTGCATCGGCTGGGTGTCGGCAGGCGCCTTGCCTCATCTGGTCTTCAAGTGCTCTTCCGGCAGATTAACCAGGATATTCACTGTGAATATGACAAATTGAATGCACAGGCTGCTGCTGTTGTCTGCCAAAGACTTTTACAGATGCATTTGACGGGTGATGCCCCAAGGAGTTACTGGCGTGCTTGCTTTCTAGGGTTGTCGGCAATAAATCTTGCTGAGAATGCTGGTAATTATGTCAGCACACAGCTCAAGTCTCAGATGTATGTGACTACAGCTATGCAGCTACAGCAGGAGCTACCAAACAGTCTCTGCTTTTTATCGCGTTATTTCCTGATGCGAGCAAGGGATACTTATAGTGAAGCAGGATCTGTTGCCGACCCTGCCATGCAATGGTTGTTCCACCCTCTAGGACACGAGTTCATTGTCAACTGCAAGCTGCCTTGCAGAGAAGGCCAGGCCATGTGGGCCTCTGTAACTAACAAAGCAAACCCTATCGAAAACATCTCTCAAAAATTCAAAGAATCATTGCTTGAGGATATCTTCGCTGGCCTCGCCTTCCCTTGCTCTGGCCATCTGTCCTCAAATAAAGACCAGCCATTATCTTGGCATGGTCCAGAATCTGAGCTTCATCTCCTTCACGAGTGCTGTCGCAGTGCCCCACTCAAGAGTAAGAGGTCTCTTGCCAAGGTTTGGGGCCTTTCAAAGGGAGAAGACTCCCCTTCAAGCATGGGGGGCTGCTCTGTAGATGTCCTGATGAGTAGCATCGCTGATGGGTGTGATCATGGCAGGGACGAGATAGCCGAGTGGTGGGCTGCTTTGGGATTGGTGGCACTTCACTGGCTAAGGGGTGAAGAAGAGGCCGCCAAGAGTTTTTACAGCACTGTAGACCATTTGCCAAAATCTTTATTACTCTCCGAGAATCCTATCCCAAAAGCCCTTTTCCAGGCATTTAATGCTAGAAGAATTATATTGCATGCAGAAAGCCTTACAAGGGAGAGGCTCAAAGAATCAGGAAAACTGTGTGATAAAGCTAGCGTTTACCTTATGCAAAGTATTGAGCTGGCTTCACTTCATCATAGTTTGAATGCCGAAAACTCCTTTGGAATGGAGAAAGACACCAGGTTAGTTCAAGGAGAGGGCACTAGACAGGGCTCCCTTCATTCAGCCAATAGAATGCAAGAGCTTGCTCAGCTTCTGTGCTGTGATTGGTTGTTGGCGACACGCACAGACATCTGGGAAATCAGCCTCGACATCGTGTCTCGCCGAAGCTGTTTGGGGCTGACTGGGTTCCAGCACGACCTTGAAAGCTTGAGGACGATTGCGCACGTGCAAAAGGCTGCTTTGCCTAGGGTTTATCTTTACGAGGCTGTGGCACGACTCGTGACCGACGCAAACCCGGCCCGGACCCTGCAGCTACTACAGCGCGCGGGAACGAGGCAGGCATTCAACCAATCAGCGTGCGGTGCCTTACGTAATGATTGCGTGACAGGCGAGCGTGAGCGTGCTATTGCGTTACTGATGGCATGTCGTCACCTTCCCACTCCCTATCTGTCTGCCCCAGGCCAGCGCAAAGGCATGCTTCTGGAGGCGGCAAGCTGCCTGGAGAAGATGTGCGACAAGCGGACGCTGAAGCGCTGCAAACAAATCCTGCTCAGTCTAAAAGAGTAG

Transcript

rna-XM_032386358.2

TTTCCATTTTGCATTTCAACTTGACAGAACGAAATACTTTTTAGGGAAAATACAATGTTGTTTATTTGACTTTAATCCAGTTTTTACAGCTTTTCTGTgattaaaaatacaaacttttATAGATCATAGAGCAGTTATGACATAATGATCGAACCGAAATTCTATCATagcttctgattggctgaattTGTGTAAGGTGATCTCTATCCCAAACTGCCAGGGTTAGTTATTGATTGGTGCTCCAAGGGAAAATGGCGGCTCTCTCGGCAGTTTTATAGGGATCAAATGTTGTCGGTATTTTGGGTTTGAACGGCAGTGGAATTCCCTTCAAAACAACACCATGGCTAACAACTGGCAAAATACACCCGGTGTTGACACTACAAAGAAAATGGATTCATCCCTTGCTAATGGAGAGCTTTCACTTGATTTTATGGGAATCCCTCAACAAATATTGTTAGAAATGGAGAAATATTTAATGCCCCACCTTACAGATGAAATGCTTTCTGTTTTGCCTGGGGCCACTAAGCAGGAGCCCCAGCAGTCATCTCTACGCGACCTGCTACAAGACTCACAGCCATTCAGTTCAGGGAAAGCCCCCACAAACGGTGGAAGTGAAGAGGAACTTTTATCAACTGAACAGCAACTCCAACTCGTTCAGCTTCTTCTCAAATCAACCACTGAACAGCAAAACCAGCAAACACAAAATCCACAGTGTCTACCGAATGAGTCCATCCAACATCTTCTCAGGCAGATTATATCAGCACAAGTTGGCAGCTTCCAGAACAACGTTACCCATGCCAAGCCCAGTAGTCCAGAGACTCCTGTCGTAGAGCTCAAAACTGCTGCCGATGGTAGTCCATTTATATCTATCCCAACTTCTGTGTTGCTGAGCCATAACGCTGCACCTGAAAATGCAGAGGACAAATCTAACACAAGAACTAGAGGGAAACAGATTAGGAGCTATTCTCACAATCAGATTGAGAAAAGATACAGGGATAAGATTAGCAACAAAATGAATGAACTAAAGGATGTGGTTTGTGGACCAGAGGCAAAGTTGCACAAAGAAACGGTTCTAAGAAAAGCAGTTGATAAAATTCGCCATCTTGAGAAGGAAAACACTCGGTTGCGTCAGGAAGTTGACAATCTCAGAAAAATGCAACAGCAAACTGATACCTTGTCACAGTTCATTAGGCTTCAATCCACCAACCTTAAGCCTGGGGACAAGGATATTCAACCAAGTTTGTCTGTCAAAAGAGAGCCGACCAGTGATGATACTcaacaattatcatcatcatcatcaactaGTTTAGGAGATTCAAATACCAGACAGCCCCCAGAGATCAAGTCTGTTATCTCAGAGGGCATGCAGTGTGATGGGTGTGCTCTGAAAGACAGAACTAGAGTCGCTCTGTGTTCATTCCTCATCATTTTCCTGTTTTTTAGCCCACTGAACTTGCTATTACCAATGTCTAGATCAGAGTCTATGCTTCATTCAGCAAGCTCATACTTTAGACCTCATGGCGGAAGCCGCACCTTGAGCTCGATTGACACCAACTATCAGACATCAGCTATGATCTCTTGGGCAGTGATCATGGGTCTAAAGTGGTTTGTCAATATCATCCTGGTGATCGGGGTGCTTGTCAGAATCTTTGTATTTGGTGAGCCTGTGACAAGGCCAAACTCTGAGAGAGCCACTCTTTTCTGGAGGCATAAGAACAAGGCTGACATTGCGCTGTCACAGGGTAGTAACCTTGTAGCAGCAGAGCATCTTGAGGTGTGTCTACGAGTTCTTGGCCGTCCAACACCGCACACTAAACTGGATGTATTTTGTGGTGTGGTCTGGCATTGTTTACGGCATGCACTGCATCGGCTGGGTGTCGGCAGGCGCCTTGCCTCATCTGGTCTTCAAGTGCTCTTCCGGCAGATTAACCAGGATATTCACTGTGAATATGACAAATTGAATGCACAGGCTGCTGCTGTTGTCTGCCAAAGACTTTTACAGATGCATTTGACGGGTGATGCCCCAAGGAGTTACTGGCGTGCTTGCTTTCTAGGGTTGTCGGCAATAAATCTTGCTGAGAATGCTGGTAATTATGTCAGCACACAGCTCAAGTCTCAGATGTATGTGACTACAGCTATGCAGCTACAGCAGGAGCTACCAAACAGTCTCTGCTTTTTATCGCGTTATTTCCTGATGCGAGCAAGGGATACTTATAGTGAAGCAGGATCTGTTGCCGACCCTGCCATGCAATGGTTGTTCCACCCTCtaggacacgagttcattgtCAACTGCAAGCTGCCTTGCAGAGAAGGCCAGGCCATGTGGGCCTCTGTAACTAACAAAGCAAACCCTATCGAAAACATCTCTCAAAAATTCAAAGAATCATTGCTTGAGGATATCTTCGCTGGCCTCGCCTTCCCTTGCTCTGGCCATCTGTCCTCAAATAAAGACCAGCCATTATCTTGGCATGGTCCAGAATCTGAGCTTCATCTCCTTCACGAGTGCTGTCGCAGTGCCCCACTCAAGAGTAAGAGGTCTCTTGCCAAGGTTTGGGGCCTTTCAAAGGGAGAAGACTCCCCTTCAAGCATGGGGGGCTGCTCTGTAGATGTCCTGATGAGTAGCATCGCTGATGGGTGTGATCATGGCAGGGACGAGATAGCCGAGTGGTGGGCTGCTTTGGGATTGGTGGCACTTCACTGGCTAAGGGGTGAAGAAGAGGCCGCCAAGAGTTTTTACAGCACTGTAGACCATTTGCCAAAATCTTTATTACTCTCCGAgAATCCTATCCCAAAAGCCCTTTTCCAGGCATTTAATGCTAGAAGAATTATATTGCATGCAGAAAGCCTTACAAGGGAGAGGCTCAAAGAATCAGGAAAACTGTGTGATAAAGCTAGCGTTTACCTTATGCAAAGTATTGAGCTGGCTTCACTTCATCATAGTTTGAATGCCGAAAACTCCTTTGGAATGGAGAAAGACACCAGGTTAGTTCAAGGAGAGGGCACTAGACAGGGCTCCCTTCATTCAGCCAATAGAATGCAAGAGCTTGCTCAGCTTCTgtgctgtgattggttgtTGGCGACACGCACAGACATCTGGGAAATCAGCCTCGACATCGTGTCTCGCCGAAGCTGTTTGGGGCTGACTGGGTTCCAGCACGACCTTGAAAGCTTGAGGACGATTGCGCACGTGCAAAAGGCTGCTTTGCCTAGGGTTTATCTTTACGAGGCTGTGGCACGACTCGTGACCGACGCAAACCCGGCCCGGACCCTGCAGCTACTACAGCGCGCGGGAACGAGGCAGGCATTCAACCAATCAGCGTGCGGTGCCTTACGTAATGATTGCGTGACAGGCGAGCGTGAGCGTGCTATTGCGTTACTGATGGCATGTCGTCACCTTCCCACTCCCTATCTGTCTGCCCCAGGCCAGCGCAAAGGCATGCTTCTGGAGGCGGCAAGCTGCCTGGAGAAGATGTGCGACAAGCGGACGCTGAAGCGCTGCAAACAAATCCTGCTCAGTCTAAAAGAGTAGTCTCGGTAAATACTTGGCCATCTTGACATTGGAAACCAATTAAAACCAATAAGGATACAAAATGTATCTATCTGATTGACACAAGGCTCACTAGTCTATCAGATGGACTAAAAGAccgatttagacagcacgatttagtcgtatgcgacctgtcGACGACATATTTTAGCTACGACTTTTGTAGTCGAGCATCGTAGCTGACTTACACTCCACGACTGACTCCACGATTGAAGTTGTAGAGGTGTCGCATACAACTAAATCGCGCTGTCTACTTATAGCTATGAAGCTCGTGTGATCTTGATAAGCCAACTTTATTATTAACGTGGCCGCGATAGCGCGCGTCAATATGAAAAAGCTTGGTATCTCACGCTTTTCACGGAAAAGGGTCTTTATTTTTTCCAATGGAAAATTATGTTGTAGTCGTTAGGATTTTATAATGAAAAATGTTATACTTCTTTGTTATAATATCAAAGGAAACCCGGTTTGATTTGCGTAAGAAACAAAGCCGCATCAACatgaaaattttaaaacacTTCAACGCTCAgtttaaaaatttaaattcTCGTTTTAACGACTCTTGTTGGCTTCACACCCATTGCGAATAAATGAATTCTTGGAACTAtttgcaaataaaatattctttCGTAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O97676	Sterol regulatory element-binding protein 1 OS=Sus scrofa OX=9823 GN=SREBF1 PE=2 SV=2
P36956	Sterol regulatory element-binding protein 1 OS=Homo sapiens OX=9606 GN=SREBF1 PE=1 SV=2
P56720	Sterol regulatory element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Srebf1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005329 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46062 all species →	STEROL REGULATORY ELEMENT-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_032242249.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242249.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

41TPM > 0

16Conditions

19.1Max TPM

8.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	11.93	15.18
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	8.34	10.56
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	9.07	10.50
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	7.36	8.55
whole 6 week old aboral regenerate · regenerate uncut	3	3	7.12	7.35
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	5.21	8.00
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	10.58	11.04
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	14.03	19.12
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	6.71	11.06
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	8.94	9.76
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	8.46	9.20
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	7.36	12.39
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	10.25	10.76
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	8.67	13.55
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	6.58	10.40
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.99	8.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	15.18
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	10.68
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.92
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.56
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.28
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.19
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	10.50
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	8.77
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	7.93
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.55
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.77
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.77
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.35
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	7.18
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.82
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.00
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.62
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.04
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	11.01
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	9.70
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.12
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	13.08
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.88
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	11.06
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.09
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.76
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.62
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.44
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	9.20
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	8.84
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.34
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	12.39
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.68
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.76
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	10.06
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	9.92
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	13.55
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	12.46
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	10.40
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.33
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	8.97
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.