Gene detail

Detailed information of XP_032242268.2 in Nematostella vectensis

Genomic Location: NC_064037.1:11089483...11104058
NR annotation: XP_032242268.2, uncharacterized protein LOC5516524 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516524

ATGAGCACAATGGCTCCCAGCCGAGGCTCCAGTTTTGAGGGACGCATGTTCTTTGTCTATGACTGTGAGGCTTGCAAGAAAGAAGAGGACCCCCCTGAGAGTGCGATCATATATTTCTACCCTCATGGGGCGACAATTGAAGATCAAGTATCAATTTGTGGTCAGATTGTTGGCATGTCAAAATTCCTGACTGATTTTCACCATGCATCACCAGTCCTATTCAAATTGAAGACAGAAAAGATTGTTATCTCTATTATTGGTGATTACATCTTGGCCCTCGGCGGTGATCTAGGTGAACCAGACTCCCTATTGATCAGACAACTGGAGACTCTTTACCAGCTGTTTGCTTTTTACCATGGCAGCATTGATATTGTACGAAAGATGTGCAGAAGCCAGGCTTCATTTCTGACTCAGCTGTGTATAATATGGGATTGCTATTTGCCATTTGTGCGGCATTATGGAGATACTCTGCCTGCTGTTTTTGATCCTTTACAATTCCTTGAGACTCCTAAGAACTCTTCTGGTTGTTTTCTGAAAGCATCCCACATCTTACAGGCCTTCCAGAGACGCCCACACATCCTTGGTGGATGTATTCTCTACAGCAATAGTGTACTTTGTACCCATTTGGACCCCTCTGTGACCAGGCGCCTGCTTCTGTTGAAGCCAAACCAGAGTCATCATCCGGCCAAGCCAGTAACAACAGATATCAAGCTTCCATTTGGAGTGCGTATCCTCAACTCTTACGTCACACTCTTAGAGTTCCAGGGCCTACTTGAATCCATGTCCCAGTCTCCTTACCGCCAGCAAACAGCACAGGTAGCCAAGAAGTTCAGTAACGTCAGTACCTGTTTGACTCCTGTGTCCAGTACCTCCGAGCGGACCTCGGAATCTCCTTCATCCATGGACGGTCTTCTTAATGAAAGAGCCCTTGAGACTGAGAGCTCACAAGCCGTAGCTGAGCCCATAAATGAATTGGAAGGCAAGAAACCTGACAATTTAAGACCGGAGTGCGGGGAGAGTTCACCTGGATATAGACGCAGAGCTGAGAGTAGTGGAGGAAAAGTTAGGACTCAAAGAGGGAGGGCACGTCGGACGCAGTCCTTGCCAACCGATGGCAAGAGAGAGAAGAGGGAGGATCAGAGGAGAGGTTTACGGGCCCAGAAAACACTTGATTCTACGGTTATAGAAACAGGGAGTGGGAAGCAACCTGATGGTATAGAGATTGAACTGCATAAAGAAATGTGCTCTTCTTCTTCTCCTCTGCATCAGGATACGTCAGAAGAAAGTGAAATAGAGCATGCGGAAATTCCTTTGACGAATTCTTCTAAGCATGAAAAACCTGTTGAAAATGCTTACATTCCTGACTTGGATGCGATTAGAAGTGGAAGCAATTCTGAAAAATTTGCTAGTATTGGTGCTGTAACATCGATCACAAATTCTCGTTGGTCTTTGGGAAATTGCGAATCAAATGAAATTGATGGAACTAACGGAAAATACTTACAGAGAAACTCCTATTGTAGGGGAAATGTAATTAGTTTATCTTCTGGGTCTCATGTTAAAGATGGTTTAAGTAGAGAGTTTTTTAATTGTGAGGATAACGGGGAAGAGAGTAACCATCAGTCGTCTGGTCAAGACGTTGAGGATCTCCAGTGTACCGAACCAGGTGTTTCAGGTGATGGGATTGGTACGATATGTACGTGCTCCGATAATGGACCTGTCAATAAAGAAACTGCATGCTCTCTGGACGTCAGCGACGATAATCAATCTGTAGATGAGGCCATGCTTGTCATGGATGGCATCGATACTAATGGTCTGTTAGTCACGCAGCATGAGAGAAGCTTCCCAGTAGAAAACATGCAGCTTTTTACGACAGAAAATAACGCGGGAATAATGGAAGAGGGTGTGAACAACTCGATAGGAAGTGAGGGGATGATCCTGAGTTCAGAAGAAATGTTGAAAGACGGTAGAGATTTACAAAATCCTTCAGCCTCTTGTTTATCACCTGATGTTGGGCGCCAGGAAGACCTGCCTGAGGATAAGTCTAGTGATTTGGACCCGTGCGCTGGAGATGATGAGGGTAATTATTTACTGGGGCTAGACGTATTTACAAACACTGTCCAGGAAAGTAAGGTTTCTGAAGGCCTTACTTACAAGGAGGGATGTGACACTGTGGAAAGGGAGAATCTACTGACGGCCGCGGATGAAAGTGGCCCTGAATTTACAGAGAGAAATCGGACTAAAGAACCTTTAGTAACAATATTAGACAAGGATGGATGTGACATGGATGATGAGAGTCTCCAACCAGCCACAGGAGCAGATAGAAATTCTGATAAGGTAGACTCCATGCTACCTGATTATGATATGACACACTCGAGTACTGTACTCATTTCTGAGAAATCAGAGACTTCTGAGAATCTTGAATGCATTGGGCAAAAGACATCAGAGAATTTTGAGCAAGGGGCTGCTGAAAAGTCTCACTGCTCGGAACAAGAAACGTTTGAGTATTCTGAACTTGTGACTTCTGACAAATCTGAACGATCTAAGCAAGAGCAAGATAGCAAGTGCTATCAACATGAAGGTTATGAGAGACCTAACTGCTATGAACATAAATTTTCTAACAATTCTGAATGCTCCACGGCAGACGCTTCAAGGCACCATGGACAGAATACAGAGAGAAAATACCATTCTACTGAGGAGACTTGCGACAGCTGCACTGTCGATGATATGGGGTCTCCTGGAAAATCTCCTTCAGGCACATGCATTACTGGATCCAAGATTCAAGCATCTGCGTTTGGTACAGATGAAGCAGAGAAATCACAAACACACATGATGACCCGCGAAGAGTCCGTTTACGAAGACTGTCCTGGGGAATTCGAAGACGAAAGACCTCAATTAGGAGCATCTAAGATCAGTGTACCCTTTGAGGACCTACGAGTCTCCACAGGGAGCCCAAGCGTGTACCATGACACGGTAGAAGACATGGTCCCGGATGTAGGGCATCGAGATTACCTCCATGAGATCACCACGGAAATTTATAAAGATTTCTCGTGCTTTGATGAGGCTGATAACTTAAGGTATGCAACCAAGTATTCTGAAAAGAACCTGAATGTGTACCAGGAGAAAAGCGTCGACAAGTGTCTCTTTAAAGACATAACCCATAAGGATAGTAATCTTGGCCGCGTTGTAGCATTACTGGATGACCAGGGGGGTGCTTCTCATGGTACTGAGGAGGGGAGGCTGGGTGTGCCAAGCTCTAGCAGTGCCGAGTCCTCAGTTGCAAGTACCAACCGCGCAGAAAAAGGGGAGTTTGTCGATGCCCAATCAGAGCATTCCAATCAAGATTTCTCTGGCGTAAATGAAGGTGACTGTTCCCTGGGAGGGAAAGGGGAAGGGGCGTTGGCCGCAGCAGAGGGACAGAGCTCCAAGAATGTCACTGATGCTGGGAAGTCTCACAAACCGCATGATGACATTGGTAATGATTATGATGATGATCAATTCGGTGAAGAAGATCCTGGCGAAGAATACTCAAATCATAGGGTTGACGGAATGGTCCATATCAACCTGTATGTTCAAGCCCACTCGGAAATAGTGCTGATACTACTCGCCGAGCCCGCTCTGCATAAGGACCCTGACACCATCAAGGCCCTGTGGAAGGCAACGGTGAACGAGCTGGGAGACTTGGAGTTTCGAATACAACAAGCAATGACAAGCTCATCTAAAAAGCCTATAGCGGAGGAGTATAGCTTCCTGGTTTATGATGGCTTCAGCAAAACAATGAAAGGGAATCAACGCGAACCGGTGTCTGTGATTGATCACATGTTCTGCGACACAGCCAAGACCGTCCATGAGCATTTTAATAACAGTCCGTCTCTCAGGAGTATTACTCTCAGGGGACAGACTTCTGCAGTACACGGCCAGCGGAGTCTCGACCAAGAAGTTTTCTACCAAAAGAAGGGCTCTCTCCGTGCTGCTCAAGGCGTGCCAAACATACGGGATCCTGTCTACAGCCTCGAAAGTCGTGCTGGGAAGGTCCTACACAGGGAACACGGAGTCAACGTATTTTGA

Transcript

rna-XM_032386377.2

GCTTGGTTCCTCACTTGGTCTCGTGACGAGCCATGTTTTTGTTTCCGCGCTAACTTTACGCGGTTCTCTAgttgtttcttgtttttaccAAGATCATAGAATTTTGTTGATTCTGCTTCGTCTTCAATGAGCACAATGGCTCCCAGCCGAGGCTCCAGTTTTGAGGGACGCATGTTCTTTGTCTATGACTGTGAGGCTTGCAAGAAAGAAGAGGACCCCCCTGAGAGTGCGATCATATATTTCTACCCTCATGGGGCGACAATTGAAGATCAAGTATCAATTTGTGGTCAGATTGTTGGCATGTCAAAATTCCTGACTGATTTTCACCATGCATCACCAGTCCTATTCAAATTGAAGACAGAAAAGATTGTTATCTCTATTATTGGTGATTACATCTTGGCCCTCGGCGGTGATCTAGGTGAACCAGACTCCCTATTGATCAGACAACTGGAGACTCTTTACCAGCTGTTTGCTTTTTACCATGGCAGCATTGATATTGTACGAAAGATGTGCAGAAGCCAGGCTTCATTTCTGACTCAGCTGTGTATAATATGGGATTGCTATTTGCCATTTGTGCGGCATTATGGAGATACTCTGCCTGCTGTTTTTGATCCTTTACAATTCCTTGAGACTCCTAAGAACTCTTCTGGTTGTTTTCTGAAAGCATCCCACATCTTACAGGCCTTCCAGAGACGCCCACACATCCTTGGTGGATGTATTCTCTACAGCAATAGtGTACTTTGTACCCATTTGGACCCCTCTGTGACCAGGCGCCTGCTTCTGTTGAAGCCAAACCAGAGTCATCATCCGGCCAAGCCAGTAACAACAGATATCAAGCTTCCATTTGGAGTGCGTATCCTCAACTCTTACGTCACACTCTTAGAGTTCCAGGGCCTACTTGAATCCATGTCCCAGTCTCCTTACCGCCAGCAAACAGCACAGGTAGCCAAGAAGTTCAGTAACGTCAGTACCTGTTTGACTCCTGTGTCCAGTACCTCCGAGCGGACCTCGGAATCTCCTTCATCCATGGACGGTCTTCTTAATGAAAGAGCCCTTGAGACTGAGAGCTCACAAGCCGTAGCTGAGCCCATAAATGAATTGGAAGGCAAGAAACCTGACAATTTAAGACCGGAGTGCGGGGAGAGTTCACCTGGATATAGACGCAGAGCTGAGAGTAGTGGAGGAAAAGTTAGGACTCAAAGAGGGAGGGCACGTCGGACGCAGTCCTTGCCAACCGATGGCAAGAGAGAGAAGAGGGAGGATCAGAGGAGAGGTTTACGGGCCCAGAAAACACTTGATTCTACGGTTATAGAAACAGGGAGTGGGAAGCAACCTGATGGTATAGAGATTGAACTGCATAAAGAAATGtgctcttcttcttctcctcTGCATCAGGATACGTCAGAAGAAAGTGAAATAGAGCATGCGGAAATTCCTTTGACGAATTCTTCTAAGCATGAAAAACCTGTTGAAAATGCTTACATTCCTGACTTGGATGCGATTAGAAGTGGAAGCAATTCTGAAAAATTTGCTAGTATTGGTGCTGTAACATCGATCACAAATTCTCGTTGGTCTTTGGGAAATTGCGAATCAAATGAAATTGATGGAACTAACGGAAAATACTTACAGAGAAACTCCTATTGTAGGGGAAATGTAATTAGTTTATCTTCTGGGTCTCATGTTAAAGATGGTTTAAGTAGAGAGTTTTTTAATTGTGAGGATAACGGGGAAGAGAGTAACCATCAGTCGTCTGGTCAAGACGTTGAGGATCTCCAGTGTACCGAACCAGGTGTTTCAGGTGATGGGATTGGTACGATATGTACGTGCTCCGATAATGGACCTGTCAATAAAGAAACTGCATGCTCTCTGGACGTCAGCGACGATAATCAATCTGTAGATGAGGCCATGCTTGTCATGGATGGCATCGATACTAATGGTCTGTTAGTCACGCAGCATGAGAGAAGCTTCCCAGTAGAAAACATGCAGCTTTTTACGACAGAAAATAACGCGGGAATAATGGAAGAGGGTGTGAACAACTCGATAGGAAGTGAGGGGATGATCCTGAGTTCAGAAGAAATGTTGAAAGACGGTAGAGATTTACAAAATCCTTCAGCCTCTTGTTTATCACCTGATGTTGGGCGCCAGGAAGACCTGCCTGAGGATAAGTCTAGTGATTTGGACCCGTGCGCTGGAGATGATGAGGGTAATTATTTACTGGGGCTAGACGTATTTACAAACACTGTCCAGGAAAGTAAGGTTTCTGAAGGCCTTACTTACAAGGAGGGATGTGACACTGTGGAAAGGGAGAATCTACTGACGGCCGCGGATGAAAGTGGCCCTGAATTTACAGAGAGAAATCGGACTAAAGAACCTTTAGTAACAATATTAGACAAGGATGGATGTGACATGGATGATGAGAGTCTCCAACCAGCCACAGGAGCAGATAGAAATTCTGATAAGGTAGACTCCATGCTACCTGATTATGATATGACACACTCGAGTACTGTACTCATTTCTGAGAAATCAGAGACTTCTGAGAATCTTGAATGCATTGGGCAAAAGACATCAGAGAATTTTGAGCAAGGGGCTGCTGAAAAGTCTCACTGCTCGGAACAAGAAACGTTTGAGTATTCTGAACTTGTGACTTCTGACAAATCTGAACGATCTAAGCAAGAGCAAGATAGCAAGTGCTATCAACATGAAGGTTATGAGAGACCTAACTGCTATGAACATAAATTTTCTAACAATTCTGAATGCTCCACGGCAGACGCTTCAAGGCACCATGGACAGAATACAGAGAGAAAATACCATTCTACTGAGGAGACTTGCGACAGCTGCACTGTCGATGATATGGGGTCTCCTGGAAAATCTCCTTCAGGCACATGCATTACTGGATCCAAGATTCAAGCATCTGCGTTTGGTACAGATGAAGCAGAGAAATCACAAACACACATGATGACCCGCGAAGAGTCCGTTTACGAAGACTGTCCTGGGGAATTCGAAGACGAAAGACCTCAATTAGGAGCATCTAAGATCAGTGTACCCTTTGAGGACCTACGAGTctccacagggagcccaagcgTGTACCATGACACGGTAGAAGACATGGTCCCGGATGTAGGGCATCGAGATTACCTCCATGAGATCACCACGGAAATTTATAAAGATTTCTCGTGCTTTGATGAGGCTGATAACTTAAGGTATGCAACCAAGTATTCTGAAAAGAACCTGAATGTGTACCAGGAGAAAAGCGTCGACAAGTGTCTCTTTAAAGACATAACCCATAAGGATAGTAATCTTGGCCGCGTTGTAGCATTACTGGATGACCAGGGGGGTGCTTCTCATGGTACTGAGGAGGGGAGGCTGGGTGTGCCAAGCTCTAGCAGTGCCGAGTCCTCAGTTGCAAGTACCAACCGCGCAGAAAAAGGGGAGTTTGTCGATGCCCAATCAGAGCATTCCAATCAAGATTTCTCTGGCGTAAATGAAGGTGACTGTTCCCTGGGAGGGAAAGGGGAAGGGGCGTTGGCCGCAGCAGAGGGACAGAGCTCCAAGAATGTCACTGATGCTGGGAAGTCTCACAAACCGCATGATGACATtggtaatgattatgatgatgatcaatTCGGTGAAGAAGATCCTGGCGAAGAATACTCAAATCATAGGGTTGACGGAATGGTCCATATCAACCTGTATGTTCAAGCCCACTCGGAAATAGTGCTGATACTACTCGCCGAGCCCGCTCTGCATAAGGACCCTGACACCATCAAGGCCCTGtgGAAGGCAACGGTGAACGAGCTGGGAGACTTGGAGTTTCGAATACAACAAGCAATGACAAGCTCATCTAAAAAGCCTATAGCGGAGGAGTATAGCTTCCTGGTTTATGATGGCTTCAGCAAAACAATGAAAGGGAATCAACGCGAACCGGTGTCTGTGATTGATCACATGTTCTGCGACACAGCCAAGACCGTCCATGAGCATTTTAATAACAGTCCGTCTCTCAGGAGTATTACTCTCAGGGGACAGACTTCTGCAGTACACGGCCAGCGGAGTCTCGACCAAGAAGTTTTCTACCAAAAGAAGGGCTCTCTCCGTGCTGCTCAAGGCGTGCCAAACATACGGGATCCTGTCTACAGCCTCGAAAGTCGTGCTGGGAAGGTCCTACACAGGGAACACGGAGTCAACGTATTTTGAAAAGTGGACTGGACCGCACAACATACCACGTGACTCTTTCTACAGGCTCGACAGGCGAACTGGAAGGGGACTACACAAGGAACACAGAGTGTTTTGAGAGGTGGACTGGACCGCACAACATACCACGTGACTCGAAAGGCGTGCTGGGAAGGTACAGTACTACACAAGGAACACGGAGTGTTTTGAGAGGTGGACTTGACCGCACAACACACCACGTAAATCTGACTACAGGCTCGAAAGGCGTGCTGGGAAGGTACTACACAAGGAACACGGAGTGTTTTGAGAGGTGGACTGGACCGCACAACACACCACGTAAATCTGACTACAGGCTCGAAAGGCGTGCTGGGAAGGCCCTACACAAGGAACACGGAGTCAACGTATTTTGACTCCGTGGACTGGACCGCACAACATACCACGTGACTCTTTCTACAGGCTCGAAAGGCGTGCGGGGAGGGACTACACTAGAAACACGGAGTGTTTTGAGAGGTGGACTGGACCGCACAACAAGTGCATCATCTCGTGACGCTGCACACAACCCTGAGAGGTGCCTTGTGGGGCTGTGTGCAAAGATTATGGAGTTTATGTTGTATATGAACCAGCAAGCGAATCAACTGAACATCAGTATTTAGGAAATTTTAGTAAAACGCACTTTTTTAGGAAAAGATCATTTTAGGAATGAATATATTTCAgaaatggaataaaaaaacCCTTCTTCCTGTGATATGGGTTTAACGTAGCAACTATTAGAGTTACAAAAAGCTGTCTTGCGGCGATAAATCTTTGTCGGCCTGAGTTCCGAGGATGATATAATagctagcaaaagcaaaaggcTGCCGCTGCCTCAGGCTAGGGTTTTGCAATGCCGGTACCGTCGCAATACAATCGCGGGAGTGACGGAAGTTTGTGTCACGCGCGCGTTAAACAGGTTCAAACCTCCCCCCGTGCATGCGTGTGGTCGTGTGTGAGGCCTCGCTTGATTCTGTCGCAAGTTTAACAAAGACCTTGACCGAGAGAAGTGAATTGTTTTCCCCGAAAGCCTTTCGTATCAAATGTTCCAGCACTGTGATCGAAGATAAAGCTATTCAATAGGGACTGCCTTCATTGTGTGCAGTTTTGTAGATTGTGTTAGGATATAGACCGCAAAATTGCGATATTCTTATTAATTAAGTTATACAcaataaaatatgttttagAATTTAATATAAAGCGAAtatttgtaaaaacaaaaatatattttttgattATTAAAAATTGTCGAAACTGTA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005674 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19031 all species →	Intu_longin_1	First Longin domain of INTU, CCZ1 and HPS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026091 all species →	Family	BLOC-3 complex member HPS4	Interproscan
IPR043987 all species →	Domain	CCZ1/INTU/HSP4, first Longin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14407 all species →	HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0006605 all species →	Biological Process	protein targeting	Interproscan
GO:0017137 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0031085 all species →	Cellular Component	BLOC-3 complex	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:1903232 all species →	Biological Process	melanosome assembly	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20194	HPS4; Hermansky-Pudlak syndrome 4 protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242268.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

15.0Max TPM

5.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	7.04	8.16
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	5.19	7.41
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	5.84	6.67
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	7.32	8.97
whole 6 week old aboral regenerate · regenerate uncut	3	3	5.65	6.92
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	6.10	9.80
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	7.56	10.18
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	6.30	6.44
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	3.75	6.44
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	5.32	5.93
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	5.19	6.14
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	9.65	15.03
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	6.25	6.54
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	4.84	7.59
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	4.67	7.13
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.99	5.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.16
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.48
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.47
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.41
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.18
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.98
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	6.67
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.81
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	5.05
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	8.97
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.53
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.45
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.92
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.77
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.27
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	9.80
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	8.51
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	10.18
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	6.76
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.74
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.44
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.38
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.09
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.44
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	4.81
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.93
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.34
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	4.70
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.14
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.99
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.45
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	15.03
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.21
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.72
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.54
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.52
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.71
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	7.59
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	6.92
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.13
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	6.89
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	5.97
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.