Gene detail

Detailed information of XP_032242340.2 in Nematostella vectensis

Genomic Location: NC_064037.1:12162171...12172119
NR annotation: XP_032242340.2, putative Polycomb group protein ASXL2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516590

ATGAGCGCAGAAAAAAGCGACATTAAGCGAAAAAGCAAGGGTTTAACATGGGCAGAAGCTTCGAAAATGGTTTTGGAACGGAGCGACCGTCCTATGACCCATAAGGAAATCTTAAAGGTGATAAAAGAAGAAAATCTTCGCGATGTAAGTAACCCATCTACTCTGGCCTGCCTAAACGCCATGTTGCACCATCATTCCCGAGGTCCTGATGCTTTGTTCTACAAAGTAGATGGTCGTATGAGCTGCTATGGCATGAAGAAACACAAATTGTTAGAGGAAGGCACAGGTGAGAGCATTCAGAAGGTGGACAGGTCATCTGCCTCACCAAGCAATAGTACTGTATCCAATCCACCATCATTATCATCTGACTCTGAACCCTCTACACCAGCAACAAACGCATTATCTCCACCTCAGAGTATTGACCACCCACCAACACCCATGGAGGTGGAAACCACCCCATCACCTACAGTCATTGAGGTCCCAGATATTGCACGAGAGGAGACTCTTATCTGCGGGTCACCAACTGAGAAGGAGGTTGTATTCCAACCAAAAGTTGCCCAGAATCTTATTCCACCCCAACCAAGAAAGGCAGCTAATAGCAGGTCTAAGGTAGGGGCCAGTAAGCGGAGTCAAAAAGCTAGACCTAGAGGGGGGCAGTCCGCCAAAAAACCACGCCTTAGCAGTACCCGGCCAAGACCTGTAGCTAAAAATGTCCTGAAGAATTTGAAAGTTGGACATTCAAGCCCTGCTGCAGATAGCAAGACAGTAAAGGTAAAGAAGCCGGTCCAGCCACCCCCTTCAGCAGGAAGCAGCCATGTCGATGAAGACATGCATTCCCACACCACTCCCCAGATTGCTGCTGCCAGGAACATGGTCAAGTTCTCAGGGCTAGTCACCAAGAAGCAACGAAGATACAAGAAGATGGGAGTAGCTGACCAAATTAAGAGAACAAAGGAGGGAAGAGTTGATCTTCAGTCCCCAGAATCTATCCTAGCAAGCGTCCCTCTTAGGAGTCTCCTGAATCATCGCACCTTCACCATGTTGCCGCCTGCCTATCAATACCAGCTACTACTGCTACTGCCAAAGTGTGACCGGATTGTTGGACAGGACAATGGACTAAGACCATCTATTACAGCATTTACGAATGAGTTTTTCACTAGTAACTGCCAGATGTGGAGAGAGCGTCTGCGAGACGGTGAATTCACACCAGAGATGCAACAAAGACTAAAGATTGAAGAAGAAAAACAAATAAAACTAGATCCTTGGAAAGCTAAGTATTTTGAACCAATCTGGGGACAGAAGAACTTGTCTCCGCTTGACGCTATGATGCCGCCCCAGTTTCTCTCTCCAAATGGGACCTTTACTGGGTTATTTCCCGACAACTTGACATTGCCTTGGAAACCAGCCGATCCAAACGAGATTGACACAACAGCTACGAAAGCTGAAGCTCTCGTCTCTCCCGGCAAGGCTACGAAGCGCGTGCGCAATAATCTGACACAGCCGCTGACCGTACCGGTGCACAAACTGCCTTCTCAGGTCGCGAAAGGAAGGTATAGCGGCACAAAAGCGGTGAGGGTGTCAGCCTCAAGGAAATCTGACGCCGCTAAAAGACTGGAAAAAGCCAACGCGGTGAGTATTGTACTGACCAAAACCCAAGCAATAGAGGCGTTGACAGCGATCAGGACCACAGAACCCACTGATATGGTGACAGCAGAAGCCTTCCTCACCAGAAAACGAGCCGTCAGGGAACCAGCCATTCAGGTACAGAGCAGGGCGTCAGCCTTAAACCAAAGGAAAACCACAACGTGTACCGAAACCTCCAAAACAGAGGCTAATAATCCAGCCATGTCGTCGAACTCTTTGAGCGAGTCCCAGGCCTCGGTGGCGAGCAGAGCAGTGGCCAACCCACTGCCGCCGACAAAATCAAGAAAGGAGCTGTCCAAAACCTCGGTCAGTAAGTCAATCTCGAGTCTGATGGGCTCCTCGAGCATGGCAACAATTGTAACCAAGAATTTCAAGGGAACTATTCCTAAGAACTGCGTCTGTCGTATGAAGGCGATGAAGGTATGTCGAATGTGCGGCGCCTTTTGTCACGATGACTGCATTACAGCGGCACACCTCTGTTCGACATGCGTAAACTGA

Transcript

rna-XM_032386449.2

CCCCATCACGTGACACGTGCCGTAAGTCGTTCGTTTGTCAAGATGGCGGGCGAAATGATGTCGGAGTAAGCGCTTACTCAACTCTTAAGATGCTATACTCCTAATTTCCACAACAAGCCCGCCATCTATTGATTTTACCATAGCGTTCCTATCGAAGGCTTCCACATGAGCGCAGAAAAAAGCGACATTAAGCGAAAAAGCAAGGGTTTAACATGGGCAGAAGCTTCGAAAATGGTTTTGGAACGGAGCGACCGTCCTATGACCCATAAGGAAATCTTAAAGGtgataaaagaagaaaatctTCGCGATGTAAGTAACCCATCTACTCTGGCCTGCCTAAACGCCATGTTGCACCATCATTCCCGAGGTCCTGAtgctttgttctacaaagtaGATGGTCGTATGAGCTGCTATGGCATGAAGAAACACAAATTGTTAGAGGAAGGCACAGGTGAGAGCATTCAGAAGGTGGACAGGTCATCTGCCTCACCAAGCAATAGTACTGTATCCAatccaccatcattatcatctgaCTCTGAACCCTCTACACCAGCAACAAACGCATTATCTCCACCTCAGAGTATTGACCACCCACCAACACCCATGGAGGTGGAAACCACCCCATCACCTACAGTCATTGAGGTCCCAGATATTGCACGAGAGGAGACTCTTATCTGCGGGTCACCAACTGAGAAGGAGGTTGTATTCCAACCAAAAGTTGCCCAGAATCTTATTCCACCCCAACCAAGAAAGGCAGCTAATAGCAGGTCTAAGGTAGGGGCCAGTAAGCGGAGTCAAAAAGCTAGACCTAGAGGGGGGCAGTCCGCCAAAAAACCACGCCTTAGCAGTACCCGGCCAAGACCTGTAGCTAAAAATGTCCtgaagaatttgaaagttggACATTCAAGCCCTGCTGCAGATAGCAAGACAGTAAAGGTAAAGAAGCCGGTCCAGCCACCCCCTTCAGCAGGAAGCAGCCATGTCGATGAAGACATGCATTCCCACACCACTCCCCAGATTGCTGCTGCCAGGAACATGGTCAAGTTCTCAGGGCTAGTCACCAAGAAGCAACGAAGATACAAGAAGATGGGAGTAGCTGACCAAATTAAGAGAACAAAGGAGGGAAGAGTTGATCTTCAGTCCCCAGAATCTATCCTAGCAAGCGTCCCTCTTAGGAGTCTCCTGAATCATCGCACCTTCACCATGTTGCCGCCTGCCTATCAATACCAGCTACTACTGCTACTGCCAAAGTGTGACCGGATTGTTGGACAGGACAATGGACTAAGACCATCTATTACAGCATTTACGAATGAGTTTTTCACTAGTAACTGCCAGATGTGGAGAGAGCGTCTGCGAGACGGTGAATTCACACCAGAGATGCAACAAAGACTAAAGattgaagaagaaaaacaaataaaactaGATCCTTGGAAAGCTAAGTATTTTGAACCAATCTGGGGACAGAAGAACTTGTCTCCGCTTGACGCTATGATGCCGCCCCAGTTTCTCTCTCCAAATGGGACCTTTACTGGGTTATTTCCCGACAACTTGACATTGCCTTGGAAACCAGCCGATCCAAACGAGATTGACACAACAGCTACGAAAGCTGAAGCTCTCGTCTCTCCCGGCAAGGCTACGAAGCGCGTGCGCAATAATCTGACACAGCCGCTGACCGTACCGGTGCACAAACTGCCTTCTCAGGTCGCGAAAGGAAGGTATAGCGGCACAAAAGCGGTGAGGGTGTCAGCCTCAAGGAAATCTGACGCCGCTAAAAGACTGGAAAAAGCCAACGCGGTGAGTATTGTACTGACCAAAACCCAAGCAATAGAGGCGTTGACAGCGATCAGGACCACAGAACCCACTGATATGGTGACAGCAGAAGCCTTCCTCACCAGAAAACGAGCCGTCAGGGAACCAGCCATTCAGGTACAGAGCAGGGCGTCAGCCTTAAACCAAAGGAAAACCACAACGTGTACCGAAACCTCCAAAACAGAGGCTAATAATCCAGCCATGTCGTCGAACTCTTTGAGCGAGTCCCAGGCCTCGGTGGCGAGCAGAGCAGTGGCCAACCCACTGCCGCCGACAAAATCAAGAAAGGAGCTGTCCAAAACCTCGGTCAGTAAGTCAATCTCGAGTCTGATGGGCTCCTCGAGCATGGCAACAATTGTAACCAAGAATTTCAAGGGAACTATTCCTAAGAACTGCGTCTGTCGTATGAAGGCGATGAAGGTATGTCGAATGTGCGGCGCCTTTTGTCACGATGACTGCATTACAGCGGCACACCTCTGTTCGACATGCGTAAACTGACCATGCGATCACGTGACTCTGAGGGACTCCATAAACCACCCGAACACTGCAAGGAGCTATAGATAACCGTCAGGTTTCCGTAGTGACAAGTGTACGGTCGTCATGTTGGAACACTCTTGGAGTTGAATAGTTTATTTGCACAGACATGCCAGTATACTGCTTCAGAACTTGCTCACGAGAAGAGATCAAAATATTCttctaaaaatgttataagAAAATATTCTGACCATCTTTGTCAGCGGCAAAAAGTTTCTCATGGTGTGGACCTTTATAAGCAGGCCAGGACCCGGTTCCTAGAAACCCAATGAAATTGCTGTCTATATCACATGATGATTTTCTAGGAACTGGCCCCAAATTTCTTCCTTATTGTAAATGCGAAAATATTACTTTTGTTAACACGAACTGTGGccagaataaaaaaactaaCGGGATGATACTTAGGGAAATCGAAATTGACTTTTAGCTCCCTAGAGGCTACCAATTGTCATTCACTTCTACTTGAAGAGCTCAAAATGTTTTTCGAGTTAGCGTGGTTCCATTATAGAATGTAATCTTCGTCCTCATGGATGAATTACTAAAATTCACAGTTAGTGGGACAGATATCACATCTGTGTTAACCCCACCCCCATCCCAGCACCTTTTGTAGGCTCTAAATGAGCTTTTGTGAGCCCTGACCGACGAAGGGGACTACTTCGTTTAACAGCAAGGCTGATTTATAACTGATAATAGCCTTTTTGTTGAAATTTCTCGAGTACACTGTTAGCGTGGTTTACTTGCGGGTTGACATAACGCTTGTGAAATAGGAGATTATTAGTTATAGTGTAATATATTGTTATCAATCGTTGGAATATTTCAAGGATAATTTTTGTAATACGAAAATATTCCGACTGAATGTACATATGAAATATGTCTATTAAAGGACATTGAATATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q76L83	Putative Polycomb group protein ASXL2 OS=Homo sapiens OX=9606 GN=ASXL2 PE=1 SV=1
Q5ZM88	Putative Polycomb group protein ASXL2 OS=Gallus gallus OX=9031 GN=ASXL2 PE=2 SV=1
Q9V727	Polycomb group protein Asx OS=Drosophila melanogaster OX=7227 GN=Asx PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005609 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05066 all species →	HARE-HTH	HB1, ASXL, restriction endonuclease HTH domain	Family	Interproscan
PF13922 all species →	PHD_3	PHD domain of transcriptional enhancer, Asx	Domain	Interproscan
PF13919 all species →	ASXH	Asx homology domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024811 all species →	Family	Polycomb protein ASX/ASX-like	Interproscan
IPR007759 all species →	Domain	ASXL, HARE-HTH domain	Interproscan
IPR026905 all species →	Domain	Protein ASX-like, PHD domain	Interproscan
IPR044867 all species →	Domain	DEUBAD domain	Interproscan
IPR028020 all species →	Domain	ASX, DEUBAD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13578 all species →	ADDITIONAL SEX COMBS LIKE PROTEIN ASXL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0009887 all species →	Biological Process	animal organ morphogenesis	Interproscan
GO:0035517 all species →	Cellular Component	PR-DUB complex	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11471	ASXL; additional sex combs-like protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242340.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

46TPM > 0

16Conditions

38.8Max TPM

26.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	28.29	34.51
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	23.24	32.09
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	24.23	25.29
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	26.05	30.70
whole 6 week old aboral regenerate · regenerate uncut	3	3	22.57	23.86
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	16.56	26.12
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	24.75	29.24
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	29.69	33.21
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	26.64	30.28
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	31.71	37.12
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	29.48	31.18
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	29.68	36.74
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	28.61	29.79
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	21.20	32.14
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	28.90	31.09
whole 6 week old aboral regenerate · regenerate 12hpa	3	3	30.25	38.78

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	34.51
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	26.58
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	23.77
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	32.09
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	19.90
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	17.73
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	25.29
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	24.98
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	22.43
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	30.70
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	24.93
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	22.52
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	23.86
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	23.16
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	20.69
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	26.12
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	23.54
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	29.24
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	23.06
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	21.95
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	33.21
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	30.03
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	25.82
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	30.28
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	27.14
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	22.49
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	37.12
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	32.43
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	25.59
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	31.18
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	30.15
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	27.12
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	36.74
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	28.18
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	24.12
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	29.79
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	28.75
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	27.29
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	32.14
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	31.45
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	31.09
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	29.42
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	26.18
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	38.78
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	30.38
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	21.59

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.