Detailed information of XP_032242361.2 in Nematostella vectensis

Genomic Location: NC_064037.1:11340069...11363141
NR annotation: XP_032242360.2, ATPase MORC2A isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y6X9ATPase MORC2 OS=Homo sapiens OX=9606 GN=MORC2 PE=1 SV=2
Q69ZX6ATPase MORC2A OS=Mus musculus OX=10090 GN=Morc2a PE=1 SV=2
Q8C5W4ATPase MORC2B OS=Mus musculus OX=10090 GN=Morc2b PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004737 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17942
all species →
Morc6_S5Morc6 ribosomal protein S5 domain 2-likeFamilyInterproscan
PF13589
all species →
HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF07496
all species →
zf-CWCW-type Zinc FingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036890
all species →
Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR041006
all species →
DomainMorc, S5 domain 2-likeInterproscan
IPR011124
all species →
DomainZinc finger, CW-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23337
all species →
ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24135MORC; MORC family CW-type zinc finger protein-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242361.2 across 48 RNA-seq samples of Nematostella vectensis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples
0TPM > 0
16Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole 6 week old aboral regenerate · regenerate 96hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 144hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 0hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 2hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate uncut 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 4hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 120hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 36hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 24hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 20hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 16hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 72hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 60hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 48hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 8hpa 3 0 0.00 0.00
whole 6 week old aboral regenerate · regenerate 12hpa 3 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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