Gene detail

Detailed information of XP_032242682.2 in Nematostella vectensis

Genomic Location: NC_064045.1:3315504...3328045
NR annotation: XP_032242682.2, HAUS augmin-like complex subunit 2 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_032386791.2

CCACTGAATCGTTAACGCGGGAAGACTAAAACTTTGTTTATCGTTCGAAACGAAAGAAAAGCAGATTCAAACCTCGTAATTTTCCCCGCGCTGTACCCTTGCAAAAATCCTTAGTTATAGTCTTCGCAAAAAAAAGTTCCTTATTAAGACTACGGCTACCCCATAATCTGAAGATGCTTCGTAACTCTACGCTTGATAGTCTAAATACGAGCGCGACAGTTAATCCTTGGTCGCCATCCTCGACGTTTGTCAACTTGGGGTCTCTTCACAGATTTCTTTCACTAGCTGAACAAACCGGTCATTTTACTAAGgattTAGACTCTCATGATGAAGTAGTGAAGCTTGCTCAAGAGAAATCTCGTTCTATCATCATGATTCAGATTTTGAAGGAAATCACAAGACTTGGCCAGTCACTAGATAAGaTTAATCTGGAAATCCAGAGACATGTGCGTGACCTAGAGACCATTGACATCACAGATGTTGACAAAATAGGGAAGAGGACTTTTCAAATGCAGCAAGTCTCTACCCACCTCTCAGCTATCAGCACCCATAAGGATGATCTAATTACCAGACTACAGGAGCCGTTTGTTGGCAATTACCTGGTCATTGATGCTGCATATCACAAGGAGGCGTCAATGACATTACCAGAACTGGCATCATGCCTGGCAGCTTTCCCCAAACACCTGGAAAACATTGACTGGTCAAACAGCACCAACATCATGGATGGCAGACTGGATAATGTCTTAGCAGCCATAGAGTCCTCATTTGCAGACTTAGAGAGTCATTTTAGAGCGGCCCAGAAAAGTAGAAAAGCCATGAAACAAATGCAGGAGATCTGTGCTATCAAGCAACATTAGATGCCCAAGATTAAAATGCGCCTTGATGCATTCCTTCAGCGATTTCTTTGCGATGACGACAAATTCCTCGTATCCCAGCTTGCCGTCACCATCCTGGTCGAGCATTCCTATAAGCTCCTCTGCCTCATCTTGTGTCAGGGCGTCTCCAAGAGTTGTGACGGCCACGCGAAGCTCCTCCGCAGAAATGTACCCGTCGCCATTACGGTCAAATACCCTGTgatgttaaaaaaattatattaaattaAAACATCCGTGATGGGGCGAGTAGGCGTGGAGGCGAGCACGTTGCCCAAAGGTGGAGGAGTCGATGGAGAATCTGATGCGGCCGGGGAGGACGTGGAGTTGATGTGGAGTTGATGGTGGATAGTTCGAGTTGCGCTCTTGTTAGCTCTAACTGGAGTTTTAAGCTATCTTGCTTGACTTTTTCCAGTTGCAGTTGTTGGGTCAGTCGGTTGTGGGGGTTGTGCCGCAATGGCGCCTGCCATCTCAGGCAGATTTAACTCAATATGCGCCGAGATGTCGGCGATATCCTGGTTTATCGGGGAAAGTGCTTGcttttgtattgatttagttTACGAAGACGAGCAAAGAAGACGAGCAAAAGTATttggagtaaaaaaaatggatgCTCTCTGCGTGGCAAACGTTTAAGGGTAGAAATATATTAAAACATTTGTCCCATATCGGTCATTGTACACATAAGCGATCTCATCCGTCGCCATTACGTTCAAATTCCCTGTGatgttaaaaaataatgcaCCTGTCATATTTGCTGCGATTTTTAATATTCTGCGAATTCTTGTGAACAATTGCCAACCCGCTTCCTGGCTCCTGCCATTCAAACTGACTGAATTACATTTGGTGccttttgattggtcagcggCTTGCAGAGAGTTGTCGTGATTGGAAAACCATTTTGGTGCTAGCTAATGAATTCGCTTCAAGGATGTCCAATGACAGAAGGCGATTTGATTGTTCGGAATAGTCGCGAAGAATATTGAAAAGTGGAGCAACACAGTTACAATATCGGTCATTCTACACATACTGATGGCAACCTGAAGGAGGTCTCGAAGGCACTATGAATAATTGATCGCCAGCCAGGGGTGAAATGACGAGAACTTAACTCAGTAAATAATTAccctttttatatttattttgcctgTTTTTAAGCCTGATTTTCAGAAGcttatgagaaaaaaaaatcaagaatgAATACGATATATTTGTCTACCTTTAAACGGTCAACCCCTATTAAGTGGCCATATCTCGCGGTTCTTCCAAGAgttggccgcttaatagaggtaccaatGTAAAAATgtatgaatgaataaatacaaCACTTTGAAAGATTTAATGCCGAGATCAAATCTTTTAGCCTTTCCCCTTAAGTAGTTGCTCTTGCAAATAAGCAACACTTCCTCATTTTCCCCTCGTCGTGTACAATGAAGACATTTTAATCTTTCTGCCGCAAGCCAAAATTCACAGATGAAGGATATTCTAATCATCCTTTTGTTTCGTACAATTCATAATCATTCACAGCCAGAGATCCGGTATTTATGAAGGAAGCTTCCTTCATATTAAGGGCAGGGATTATCATGCAAAACATGGCTGTCGAAAGTAATAAAGTTAGCACGCAGGTGGCTTAAAAAGGAAGTCAATTCTTTGCATAACGTCGCAATATTATTGCCAAGtgatcttttttttcaaaatattatcTTATTATCGTAGCTTTGTGTAGTTTCTGAATCAACAGGATAACAGAGAAGAAAGAATAGTTTGACCATTTTAAACCCCTTAAAAAACGGATTTCAAGACAAACTGCGTCGTAGTCGTTTTTTTGCACGGATCCCTTCACATGGGCAGTAGGAATGGAGTTTGTCATCGTGAACGTGTCAAAACACTTTTTCATCATTACGGTGAAAAACTCTTTAAGGTTTAAAcacaaaagtaaataaaatgttACGAAGGTCACTGCCGTTACCATAACGGCCGATACACTGTTAGATTAAAAAGTAAATTGACAAACACCGAAATTTGCTCTAACATCGTTTATCTTGTTTAACTTCTCGAGCGGCATACTCTCTGTGTAGCTAAAAAAATCCGGTCGAGCGGGGTTGCGATAATATCTGAGCTGCTAATTTAAAAGCACCGTGGAACCCAAAGACTGCAATGCGCTGAAACGAGCGGAAACATCACTTGCCAATCAGGAAAATAACCCGCGGGTAAACGTTCACGACGCTTGCTCAATTTCCACAGTCAGCTCCCTGCAGAGAGTGACCATAAGTTTAACTCATAGTCTATCTAGGCCTTTTTCTGGATATCTGAATATCGCGTTATATGAAAGTACAGGGGCCCGTACAGGTGCATGTGAAGCGGAAACGGCAACCTTTCAAATACAAggcctctttttatttttctctcgCTGACCCGCTGAACTCAGTCTTTGTGGTTTGCgagaaaaaaatccttcattCTCGGAACCAGTTCTTTAGTTTTAAAGGCATGACGCGATACATTGTGTAAAGAACGTAAAGGTAACCTTCACAACTGATCTTTCACtttcattcgttttcattctatTTCAATTTCcgtaataaaataaaataagaaatgtgtttttttaagtaaTTTCCTATGGAGAACAAAATTTCTAAGGGTTTTCGTTCTTTTTGGGGCTAAATTTGTAACATTTGATAGGACTGAAACACAAAGGTTTTTGCAGTATCGTGTTATAAATATGAAACAGGCACACCCTATTGAAATTAGACTACCAAAATTGTCCCTATTAAAATTAATCCTTTGCAAATATCAGTTTATGAGAATAAGAGCCGGCATAAAATACGTACGTTGCCTCAATATACTTCTACGTAAAAAATGTTGTAAATattacaaaaacaagaaacacaaaGAAGGCCCTAGGTTCGAACCTGGGGTCCTTTTTGCAAAATATCAATATTATATTCAGGCTAGCTTGTTTTTCTTCTCAAGTGGTAAATTTTAAGTAGACCGTTGCACGTTGCATACAGTATGACCCGTGGTCATACtgtatctttttttatcttttatttatcttttttgctTCTTAATTATAGATATTTTAACACTGTACATATACCGTCTGGGCGCTCGAGTGTCCGGCTAGGCAAACAGATTTTCAGACGTAGGTTTAATTGCAGGAAATTGCAGTATTTGTTTGGTGGTAGTCTATTTTGAAGTTCAAATGTATAAAGGAGGTATGGTGGACAACAAAATAtccatcttgtttttgtttattaggAAAGGGTTTTCCTTTTTATGTTGTAATTGATTTCATAATTGAATTTCTAAACCCTTACGGATATTTTATTTGCGTTTCTTACTGGTTTAGAATGCGGTTTTCCTAATAATCTACGTATAAAAAGTGTCGAATTTAGATAACAGTCAGCGACATTTGGGAGAAACCGCAATTTATAGCACTTGTTCTATTGACAATGCAAAACAATATCTGTTGggaaacattaaaaacaattatcccaGCTGGTGTTAGATAACGGCTCATTTGATTTagcgatgttttttttaatcgtaaatatatattttttattttaggaaaagttCAAATAGAAGTTTCATTATTGATATCCTAGGATTTCAAGAGCGGTTAAATTAAGCCGACTGCATTTTTTACGGTTTATGCACTCAAGCAGAATTATTAGCAACTAAGATATTTAACAATGTTCTAAATTACACATTTTAGATGCTAGCGATATATTATTTGGTTACTCCAAAGCGTTATATGATATGTAAATCAGGTTTCGAAATGGGAATTTGTAAGAAAGGAAGTGCGAAATCGGTATTTTTGAAACTCTCTTAAATTTCTATTGGGTAATAGTACTTAACATGAGCACTGATGGGTTTAAAGTCTTAGCAAATAGGTAGAAAAATGGGATATCGAACGGCTAATGAAACTGCGCATTTGAGGTAAAGAatatttctttcttcttgGCTCATGATAGAGAAATGGAAATTTAAAAAGCGGGTTTAATCATGGAGCACTTTCCATCTCTATTAGTTTTAATGAAGCAAACCTGACACCTCCAGAAAGTGTGAAATTTTCAAAACCACTGACGACGACGATTCAAAATTTGAATTCCAGACAGAAATATAAGACTCGCATAAAATTTATACGAATGGTTTATGAAATAAGACTTCAACGTCTATATAATATATGTTAGAAGTTTTTTTactagcaaaaaaaaaccctgaaaaatagaacagagatttaaaaatttagttaaaaatatatatttaaagcAACTTGAATAATTAGAAAAAGAGGATTTTGTTTTGCTGGTAACTTCTCTGAAATTGATTTAGAAATGAACAAGCTATTAGATTGTGAATTGGGTTAAAGAAACAGGTAGAAAAGATCATGTTTTGATTTAAAGTTTACTTCAATGTTACACGAGAACCGAGTactttttacttaaaaaatattta

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008220 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15003 all species →	HAUS2	HAUS augmin-like complex subunit 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028346 all species →	Family	HAUS augmin-like complex subunit 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16039 all species →	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031023 all species →	Biological Process	microtubule organizing center organization	Interproscan
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007020 all species →	Biological Process	microtubule nucleation	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0070652 all species →	Cellular Component	HAUS complex	Interproscan
GO:1990498 all species →	Cellular Component	mitotic spindle microtubule	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16585	HAUS2, AUG2; HAUS augmin-like complex subunit 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.