Gene detail

Detailed information of XP_032242778.2 in Nematostella vectensis

Genomic Location: NC_064045.1:3780016...3790622
NR annotation: XP_032242778.2, hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5516931

ATGGGAGTCTTCTCTGGTTCCTCAACCTTTACGGGACTTCTAGAACGAGCGACAAGCCAGCTTCAACTTGAGCCGGACTGGGCTACAATTCTTCAAATTTGTGATAGTGTCAGGCAGCAAGATGTCTCGCCCAAGTTTGCTGTCTCTGCCATCAAGAAGAAAATGTTTGATCGCAATCCACATGTCGCAAAATATGCGCTTACCGTGTTAGAAGCATGCATGAAGAACTGCGGTTCTATAATCCACGATGAAATTGCAACCAAGGATTTTATGGATGAGATGAGAAATCTGATCAAGAATGGTGCCGACCCGGTGAAAGATAAAGTGTTAGGTCTAATCCAGACGTGGTCACATGCTTTCCGTAACGAACCAAAATACAAGATTGTGCAGGACACCTTCAACCTTATGAAAATGGAGGGCTGCAAGTTTCCAGCCTTCAATGAAAGCGATGCCATGTTCTCAGCAGATTCTGCCCCAGCATGGGCTGAAGGAGATGTTTGTCACATGTGTCGCGTGAAGTTTGGAACCTTTATCAGACAGCATCATTGCCGTAACTGTGGCCAGGTGTTCTGCAAGAAATGCTCTTCCAAGGAATCCATTATTCCTCAATTTGGTATTGAGAAGGAAGTCAGAGTGTGTGACCCCTGTTACTTAAAGATCAATCCTAATAGCAAAACTGCACAGACAAAGCCAGAGCCTTCAACATCAGGAGGTGCTGAGAATGAGCTCCCCCCTGAGTACCTGAATAGTCCCCTTTTTAAAGAATCACAGGAGCCTCCCAAGAAGAATGAGCGCGACCTGCAAGAGCAAGAAGAGGAGGAGCTACAACTAGCCATGGCCCTCTCCTTGTCACAAGACGAAGCACAGAAAGAGGTAAGACCAAGTCCCAAGTCCTCGTTGTATGGCAGCCCTGATTCCTACTCTCCCTCTGAGGCACCAAGGCACAAGCCAGCAAGCCAGTTCTACAATGCTGTCGTGGAATCAGATGGTGGTGGCGATCAGCCTGTGGACCCAGAGCTTGCTAGATACCTGAATCGCTCTTACTGGGAGGACCGTAAGGGCAGGACCTCACCCTCAGCACCTGAGGCACAGATGAACAACAGCAGGGTGCCATATTCATCCCACATTGAGAATAAAGTAACTAAAGGCAAAAAGAAAAAGAAGAAAGATAATTTCTACAAGTTCACTCCTCAGCCTCAAGCTATCCAGGAACCCGAGGTGAATGACCAGGAAACCAATGGTGACTTGGAAACTGACCAGAGTTCTGAGACGCTGGTCAACAACTTCCGCAGCAGCGTGGAGATGTTGATGGAACGAATGCAGGATATATCTGGAAAAGGGAAGCACGTTGCCATGGATGCCACAGTCCAGTCATTATTTCAGACCGTCAGTGCGATGCACCCACAACTCTTACGGTTGGTCGAGCAGCAAGAACAGGAGACTGGGAAATACGAAGGAATCCAGGAAAGACTTGGTCTGGTAAAGGAAGCACGTGCTACGCTTGAGGGGGCACGCGAAGCGCACAGAGAGAAGCTCCGGCAGCAGGAGCTGGAGCAGGACATGCTCCGCCGCATGCAGATCGAGCAGAAGCTGGAACTAATGCGGCAACAGAAAGCAGAGTACCTCGCCTACCAGCAGCGAATCCAGGCAGAGCGGCAGATTGCACTGGAGCAGCAGCAGCAACAGCTACGGTATCAGATGGTGCCTCCTTATGGTGCACAGTACCCTGCTCCGCCCCCTGACGGCAGCCCCTATTCCTCCATGGTGTATGCCCCTCCAGCTGGGATGCAGCCTCCTCAATCAGGCAGCGGGGCCCCACCTGCTATGCCGCCACCTGTGGGTGCTCCAGGCGGACAGCCATCGTATAGTCATCCAATGCCTCAGGGGTATGCCCCTCAGGGGTACCAGCCGGAGTATGGAGGGCAGTCCATGCAGCCTCCGCCGCCAAAGACAGAGGGCGTGCCGTCACAGGAGTATCCCCCTGGTTATGGGGTGGAAGGACAGGAATCACAGCCCCCTCTATCTGAGTACCAGCAGCAGCCGACTATATTCGAGCAGCCTCTTGGTATTTACTCCTCGCCACAGTCGATGAACCAAGGCCAACCCTCACAGGGGTACAATGCCCAGCGTAACTCAGCAACAACACCCTCACCCCAGCAGGCATACACCTCTCCGCCTAGCTCAGCCCCAGCACCACCGCCCCCGCAGTACAACCAGGCATCGATGCAGCAGCTACAGTACGGTGGCCCGCAGCAGTACCAACACCCTCATGCCAACACCCCATCACCCACCCCGCACCAGCAATACCAACATCCGCAGAACGCCGGCCTGCCTGCGGACAACACCTACAACCCGTCCCCTCAGGGGGACCCCAACCAGGGCGGGCAGCAGCCAGGGTATGGCGCCCCGCCCACTCAAGGAGGGCCACCCCAAGCACAGCCACCTCCGCATGCACCACCAGGGCAGGCGCATTACCAGCAGCTAGGAGCAGCAGCACCCAATCAGGGTGGCTACCACCCTCAGCAGCAGCCGCCGCCGCCCCAGGGGTATGAGCCCCAACCGCAGTACCAACCTCAAGGGCCGCCCCAGTACTACGGTGGACCACCGCCTCAGCAACAGCAGCAACGGCAGCCTCAATCTGGGCCGCCGCCACAGAGGCAAATGTCCGACTTAGAGCTTATCTCGTTTGATTGA

Transcript

rna-XM_032386887.2

GCAGCCCGACGTCATCGCAGGAAGTAGAGAATCCGCCATGTTTTATTGAAGTCTCTGAACCGACGCAAGTGTATACTATTGCTCTGAATTTTCCAAATTATACCAAATCCAGATAACTTCTAATTATCATGGGAGTCTTCTCTGGTTCCTCAACCTTTACGGGACTTCTAGAACGAGCGACAAGCCAGCTTCAACTTGAGCCGGACTGGGCTACAATTCTTCAAATTTGTGATAGTGTCAGGCAGCAAGATGTCTCGCCCAAGTTTGCTGTCTCTGCCATCAAGAAGAAAATGTTTGATCGCAATCCACATGTCGCAAAATATGCGCTTACCGTGTTAGAAGCATGCATGAAGAACTGCGGTTCTATAATCCACGATGAAATTGCAACCAAGGATTTTATGGATGAGATGAGAAATCTGATCAAGAATGGTGCCGACCCGGTGAAAGATAAAGTGTTAGGTCTAATCCAGACGTGGTCACATGCTTTCCGTAACGAACCAAAATACAAGATTGTGCAGGACACCTTCAACCTTATGAAAATGGAGGgctGCAAGTTTCCAGCCTTCAATGAAAGCGATGCCATGTTCTCAGCAGATTCTGCCCCAGCATGGGCTGAAGGAGATGTTTGTCACATGTGTCGCGTGAAGTTTGGAACCTTTATCAGACAGCATCATTGCCGTAACTGTGGCCAGGTGTTCTGCAAGAAATGCTCTTCCAAGGAATCCATTATTCCTCAATTTGGTATTGAGAAGGAAGTCAGAGTGTGTGACCCCTGTTACTTAAAGATCAATCCTAATAGCAAAACTGCACAGACAAAGCCAGAGCCTTCAACATCAGGAGGTGCTGAGAATGAGCTCCCCCCTGAGTACCTGAATAGTCCCCTTTTTAAAGAATCACAGGAGCCTCCCAAGAAGAATGAGCGCGACCTGCAAGAGCAAGAAGAGGAGGAGCTACAACTAGCCATGGCCCTCTCCTTGTCACAAGACGAAGCACAGAAAGAGGTAAGACCAAGTCCCAAGTCCTCGTTGTATGGCAGCCCTGATTCCTACTCTCCCTCTGAGGCACCAAGGCACAAGCCAGCAAGCCAGTTCTACAATGCTGTCGTGGAATCAGATGGTGGTGGCGATCAGCCTGTGGACCCAGAGCTTGCTAGATACCTGAATCGCTCTTACTGGGAGGACCGTAAGGGCAGGACCTCACCCTCAGCACCTGAGGCACAGATGAACAACAGCAGGGTGCCATATTCATCCCACATTGAGAATAAAGTAACTaaaggcaaaaagaaaaagaagaaagataATTTCTACAAGTTCACTCCTCAGCCTCAAGCTATCCAGGAACCCGAGGTGAATGACCAGGAAACCAATGGTGACTTGGAAACTGACCAGAGTTCTGAGACGCTGGTCAACAACTTCCGCAGCAGCGTGGAGATGTTGATGGAACGAATGCAGGATATATCTGGAAAAGGGAAGCACGTTGCCATGGATGCCACAGTCCAGTCATTATTTCAGACCGTCAGTGCGATGCACCCACAACTCTTACGGTTGGTCGAGCAGCAAGAACAGGAGACTGGGAAATACGAAGGAATCCAGGAAAGACTTGGTCTGGTAAAGGAAGCACGTGCTACGCTTGAGGGGGCACGCGAAGCGCACAGAGAGAAGCTCCGGCAGCAGGAGCTGGAGCAGGACATGCTCCGCCGCATGCAGATCGAGCAGAAGCTGGAACTAATGCGGCAACAGAAAGCAGAGTACCTCGCCTACCAGCAGCGAATCCAGGCAGAGCGGCAGATTGCACTggagcagcagcagcaacagctACGGTATCAGATGGTGCCTCCTTATGGTGCACAGTACCCTGCTCCGCCCCCTGACGGCAGCCCCTATTCCTCCATGGTGTATGCCCCTCCAGCTGGGATGCAGCCTCCTCAATCAGGCAGCGGGGCCCCACCTGCTATGCCGCCACCTGTGGGTGCTCCAGGCGGACAGCCATCGTATAGTCATCCAATGCCTCAGGGGTATGCCCCTCAGGGGTACCAGCCGGAGTATGGAGGGCAGTCCATGCAGCCTCCGCCGCCAAAGACAGAGGGCGTGCCGTCACAGGAGTATCCCCCTGGTTATGGGGTGGAAGGACAGGAATCACAGCCCCCTCTATCTGAGTACCAGCAGCAGCCGACTATATTCGAGCAGCCTCTTGGTATTTACTCCTCGCCACAGTCGATGAACCAAGGCCAACCCTCACAGGGGTACAATGCCCAGCGTAACTCAGCAACAACACCCTCACCCCAGCAGGCATACACCTCTCCGCCTAGCTCAGCCCCAGCACCACCGCCCCCGCAGTACAACCAGGCATCGATGCAGCAGCTACAGTACGGTGGCCCGCAGCAGTACCAACACCCTCATGCCAACACCCCATCACCCACCCCGCACCAGCAATACCAACATCCGCAGAACGCCGGCCTGCCTGCGGACAACACCTACAACCCGTCCCCTCAGGGGGACCCCAACCAGGGCGGGCAGCAGCCAGGGTATGGCGCCCCGCCCACTCAAGGAGGGCCACCCCAAGCACAGCCACCTCCGCATGCACCACCAGGGCAGGCGCATTACCAGCAGCTAGGAGCAGCAGCACCCAATCAGGGTGGCTACCACCCTCAGCAGCAGCCGCCGCCGCCCCAGGGGTATGAGCCCCAACCGCAGTACCAACCTCAAGGGCCGCCCCAGTACTACGGTGGACCACCGCCtcagcaacagcagcaacgGCAGCCTCAATCTGGGCCGCCGCCACAGAGGCAAATGTCCGACTTAGAGCTTATCTCGTTTGATTGATTCCTAAGCCATTGTCAAATTCGCTACATTTTTAAGTTTCCGTCAATGcaataatgttttatttaatctTCTGATGTCTCAGGTGTCTCAGAGTCTGAACGCCAAGTTCCTTACTTTGAAATGTTTGCACGCCATAGAGCTCTTGTTTGGAAGGCAGAATTGGGATGTATAATCTATGATTATATGATGGAGATCCTCAATAAACTTCTTATCTGCATGAATGTAAATATAGCTAGTGAAATAAAGACGCATAATGCAATTGa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14964	Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens OX=9606 GN=HGS PE=1 SV=1
Q0V8S0	Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus OX=9913 GN=HGS PE=2 SV=1
Q9JJ50	Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus OX=10116 GN=Hgs PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003104 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|VHS · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan
PF12210 all species →	Hrs_helical	Hepatocyte growth factor-regulated tyrosine kinase substrate	Domain	Interproscan
PF00790 all species →	VHS	VHS domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR017073 all species →	Family	Hepatocyte growth factor-regulated tyrosine kinase substrate/VPS27	Interproscan
IPR008942 all species →	Homologous_superfamily	ENTH/VHS	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR002014 all species →	Domain	VHS domain	Interproscan
IPR024641 all species →	Domain	Hepatocyte growth factor-regulated tyrosine kinase substrate, helical domain	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR003903 all species →	Conserved_site	Ubiquitin interacting motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46275 all species →	HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0031623 all species →	Biological Process	receptor internalization	Interproscan
GO:0032456 all species →	Biological Process	endocytic recycling	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12182	HGS, HRS, VPS27; hepatocyte growth factor-regulated tyrosine kinase substrate	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_032242778.2 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

43TPM > 0

16Conditions

29.6Max TPM

17.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	17.40	19.09
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	13.30	18.02
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	15.40	17.95
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	27.82	29.58
whole 6 week old aboral regenerate · regenerate uncut	3	3	15.77	17.09
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	17.92	29.49
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	17.37	18.93
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	16.76	21.15
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	15.43	25.67
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	24.59	26.85
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	21.19	23.49
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	13.13	20.34
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	16.51	19.03
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	12.44	18.93
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	15.88	17.37
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	16.08	25.92

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	19.09
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	18.26
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	14.85
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	18.02
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.03
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.84
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	17.95
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	15.49
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	12.76
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	29.58
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	29.03
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	24.86
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	17.09
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	16.17
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	14.06
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	29.49
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	24.27
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	18.93
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	18.00
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	15.19
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	21.15
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	17.32
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	11.82
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	25.67
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	20.63
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	26.85
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	23.79
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	23.15
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	23.49
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	20.82
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	19.27
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	20.34
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	19.04
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	19.03
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	17.23
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	13.25
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	18.93
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	18.38
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	17.37
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	16.99
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	13.27
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	25.92
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	22.32
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.