Genomic Location: NC_064036.1:1420743...1426865
NR annotation: XP_032242960.1, aquaporin-9 isoform X3 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families
| CDS |
| LOC5516987 |
| Transcript |
| rna-XM_032387069.2 |
| Protein |
| XP_032242960.1 |
| UniProt accession | Description |
|---|---|
| O43315 | Aquaporin-9 OS=Homo sapiens OX=9606 GN=AQP9 PE=1 SV=2 |
| G5CTG4 | Aquaporin-7 OS=Milnesium tardigradum OX=46460 GN=AQP7 PE=2 SV=1 |
| Q96PS8 | Aquaporin-10 OS=Homo sapiens OX=9606 GN=AQP10 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001169 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00230 all species → | MIP | Major intrinsic protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR022357 all species → | Conserved_site | Major intrinsic protein, conserved site | Interproscan |
| IPR050363 all species → | Family | Major Intrinsic Protein/Aquaporin | Interproscan |
| IPR000425 all species → | Family | Major intrinsic protein | Interproscan |
| IPR023271 all species → | Homologous_superfamily | Aquaporin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43829 all species → | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0006833 all species → | Biological Process | water transport | Interproscan |
| GO:0015250 all species → | Molecular Function | water channel activity | Interproscan |
| GO:0015254 all species → | Molecular Function | glycerol channel activity | Interproscan |
| GO:0015793 all species → | Biological Process | glycerol transmembrane transport | Interproscan |
| GO:0016323 all species → | Cellular Component | basolateral plasma membrane | Interproscan |
| GO:0015267 all species → | Molecular Function | channel activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0055085 all species → | Biological Process | transmembrane transport | Interproscan |
XP_032242960.1.Transcript abundance of XP_032242960.1 across 48 RNA-seq samples of Nematostella vectensis. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole 6 week old aboral regenerate · regenerate 96hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 144hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 0hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 2hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate uncut | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 4hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 120hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 36hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 24hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 20hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 16hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 72hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 60hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 48hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 8hpa | 3 | 0 | 0.00 | 0.00 | |
| whole 6 week old aboral regenerate · regenerate 12hpa | 3 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (NVECT_TPM,
StringTie quantification over 48 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
