Gene detail

Detailed information of XP_044164922.1 in Acropora millepora

Genomic Location: NC_058066.1:37686740...37699825
NR annotation: XP_044164922.1, carnitine O-palmitoyltransferase 2, mitochondrial-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044164922.1

ATGACCATAGCTAGGGCCGTTTTATCCAGTTTCAAACCAGTAGGAAACAGGGGGTCTCTTGGTATTGTTTCGTCCTCTGCGTTTAATGGAAGATTGTGTCAAAACAGGTGGTTTAGTTCAAGTGCAGATGACGATAGATATATTCTTCCCAAGACCAAAGTCCCTACTTACCATTATCAAGACAGTCTTCCACGCCTTCCTATTCCAAAACTTGAGGACACCTGCAGAAGGTACCTGGATGCCCAGAAGCCTCTGCTAACTCCAGAACAATATGAGGAGACGAAGCAAGTGGTTGAAAAGTTCCAAAAACAAGAAGGACAAAGTCTACATGCAGAACTGGTGCAAGAAAATAAAAGGAACAAACAGACTAGTTACATAGCAGGTCCTTGGTATGACATGTATTTATCATACAGAGACTCAATAGTGCTAAATCATAATCCATTTATGGTGTTTAACAATGACCCAGTTCCTGAACAAAATGACCAGATAATTCGAGCAACTAACCTAATCAAGTCAGCCATGAGATTTAAACTGTCATTGGATGAAAAATTCCTTGAACCAGACATTTACCATTTGAAACCAGAAAAAAGTGATACAGATTGGTTTAAAAATATTATTAGGTTTGTGCCGAGTCAGTTATCGTGGTATGGCGCATTTCTAGTGAAGGCGTTTCCACTGGATATGAGTCAGTATGGGCGACTGTTCTGTTCAACGCGGATACCAGAATTGAAGAAAGACAGACTTGCTACATATGAGAGTGCGCGACATATGTTAGTGATGAGAAACGGGAACTTTTATGTTTTCGATGCCATAAATGCAAATGGCGACATTGTGCCAACTGCAACAATTTACCAAAATCTAAAGTACATTCTGGAAGATCCCTCCCCGTCCCCCAAATTTCCTGTCGGAGTTCTAACAGCGGAGAGTCGCGAAACGTGGGCCAACATGCGGCGTGCCCTGATCGCGCAACCTGGGAACGAGGAAGTAATGAAGATGATTGACAGCGCTATATTTGTTATGTGTTTGGATGATCATGGAGTAGATAGTGTGGCAGATGCTACGCGTACGTTTCTTCATGGTGATGGGGGCAACAGATGGTTTGATAAGTCTTTTCAACTAATATTATGTAAGGACGGCAAAGCAGCAGTCAACTTTGAGCACGCCTGGGGAGACGGAGTTGCAGTGTTGCGTTTCTTTAATGAGGTTTTTAAGGATACCACGACAAGGGCGTCTTGCACTGCAGCTAGTGCTAAGCACATGAATGGCGAGGTGACAGTTAGGAAACTCGATTTTAATTTTACTCCGGAGATCGAGCGGGGAATTTACGCAGCCAAAGAGAAATTTGAGAACGCTGTTAAAGGATTGGATGTCGCTGAGCTTCAAATTCCTTCCTTTGGAAAAAATTACATCAAGAAAAAAAAGCTGAGTCCGGATGCTGTAATGCAACTCGCATTTCAGATCGCTATATTTCGGCACAGCGGGAAGTTTGTTCCCACTTACGAGTCTTGTAGTACCGCAGCATTCAAACACGGACGCACTGAGACCATCAGGCCAGCGAGCAACGCCACTGTAGCATGCGCAGAAGCATTCGAAAAGTCTCACCAAGCAGGCGTAGATGAATTGATGGGTAAAATTCGCCAAGCTTCGGACTGGCATTCCAAGCTTACTAAGGAGGCTGCTATGGGGCAAGGTTTTGATCGCCATCTTTTCGCGTTACGTCTTCTGGCTGAGTCTTCCGGAAAAATTCCGGAACTTTTTCAAGATCCTGCTTACAAGCGGATCAACCACATCAATCTTTCTACAAGCACCCTCTCCTCACCCGCTTTAATGCTTGGCGGGTTTGGTCCCGTAGTTCGGGACGGGTTTGGGGTTGGCTACGGTATTCAAGATGACATGCTTGGATGTAATGTTACGAATTATCCACCTCATACAGATGTTCGAGGGCTTTTGGACTGCATCAAGCTTAGTTTGGAAGACATTTATAGTGTTCTCGAAGGCAAGAATTTCAAATAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q60HG9	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Macaca fascicularis OX=9541 GN=CPT2 PE=2 SV=1
P23786	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Homo sapiens OX=9606 GN=CPT2 PE=1 SV=2
Q5U3U3	Carnitine O-palmitoyltransferase 2, mitochondrial OS=Danio rerio OX=7955 GN=cpt2 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00755	Carn_acyltransf	Choline/Carnitine o-acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039551	Domain	Choline/carnitine acyltransferase domain	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR042572	Homologous_superfamily	Carnitine o-acyltransferase, N-terminal	Interproscan
IPR042231	Homologous_superfamily	Choline/Carnitine o-acyltransferase, domain 2	Interproscan
IPR000542	Family	Acyltransferase ChoActase/COT/CPT	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22589	CARNITINE O-ACYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0004095	Molecular Function	carnitine O-palmitoyltransferase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08766	CPT2; carnitine O-palmitoyltransferase 2	EC:2.3.1.21	Diabetic cardiomyopathy	ko05415	deepkoala