Gene detail

Detailed information of XP_044166821.1 in Acropora millepora

Genomic Location: NW_025322647.1:336916...339108
NR annotation: XP_044166821.1, collagen alpha-1(XVII) chain-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8BQC3	Immunoglobulin superfamily DCC subclass member 3 OS=Mus musculus OX=10090 GN=Igdcc3 PE=2 SV=1
Q8IVU1	Immunoglobulin superfamily DCC subclass member 3 OS=Homo sapiens OX=9606 GN=IGDCC3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR050632	Family	Nematode Cuticular Collagen	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24637	COLLAGEN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13884	MARCO; macrophage receptor with collagenous structure	-	Membrane trafficking	ko04131	deepkoala