Gene detail

Detailed information of XP_044168769.1 in Acropora millepora

Genomic Location: NW_025322765.1:1025300...1036763
NR annotation: XP_044168769.1, LOW QUALITY PROTEIN: lethal(3)malignant brain tumor-like protein 3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044168769.1

ATGAATGGACTGCTGCAGGAAGGTGGGGCCCTTGTTACAAGTACAATGGAGGAAAGCTATGAGCCGCAATCAAAGAGACAGAAAGGGGGAAGTGATGGAGATGAACATCTAAATTCTCAAAGTCAGATTCCATCTGACAACATCGAGTTGGCTCCTGGTGAAATTACTATCGGGAATAACAGAGAAGCTGAATCTGCCATGATGAATCACACTAATCCAAGCTCCAGTAATGACTTGAAATCGAGTGGCAAGGGTGTTGCTGCAAACCCAAGTGAAGCAGTAACTGCTATGGAGACCACCGATACAGATGCAAATACAAACAAACTGAAACAAACTAATAATAACATTGAAGACAGTATGGATACTTCTGTAGATTCAACAGAGCCAATGGGTTTGAAGATCAAGAAGGAAAAGAAACCCCAGTTTGAAGATGATGACCCTTTTGCGGCTTTGGATTGGAATAATGGAATTGCCACTCTGCCAGGGAGCAACCTGAAATTCAAGTTGACAGAGTTTGGTACACTGGAGATAATAAGCACTGTGGAAACAGAGAAGGGTGAGATGACCTGGAGCACTCCAACTGAACATGGATGCAAATCTGCAAATGATGACACAAATAGCATTGTAAAGGAGTCACCAGGCATTGTTCTCTCTAAGAAGGATGAAGGCAGAAGGAACAAGGGCAGAGATTTTGTGCGCAAAGTCAAAACTTCAAGCGGCAAAATTGTGAAAAAGAAAAAGAAGGGAAAAGGGAAGAAAATTTCAATGGCAGGAAAGACGGCCGGGATGATAAGCAGTTCTATGCCTCCACCAGTCCAGGATGGGCCTTTGATGGGCAAATTTAAACTCAAAGGGAAAGGAGAAAAATATAAAGTTAAAGCAGCCAAACAGTTCATTGCATTAGAACCAGCTGACCTAATGAATGGCGAAGAAGTTCCATATGACTCCACCAAGCCATTTGTTTGGTCAGAATACCTCGCGGCTTGTGGGGCGAAAGCAGTTCCTAACATTGTGTTCAAACAGGAGAATCCATCATTGGACGTATTTCCCAAGCCAAACCACGCGTTTAGAAAGGATTACAAACTAGAATGCATTGATCCAAAGCACCCCTCCTACATCTGTGTGTGCACTATTGTGAAGGTGAAAGGAGCTCGACTTAGGATGCACTTCGATGGCTGGTCTGAGAGCTATGATTTCTGGACAAACTGGGATTCGCCTTTTATCTTTCCAATGGGCTGGTGCGAGAAGAACGGACAAGTCCTACATCCCCCGAGAAGTTTCAACAAACAAGAATTTAACTGGGAAAAGTATTTGAAGAGAGCGGCCGCAAAGGCGGTTCCCGAACATTTATTCAAACCGGATGGCGTGTCATCCACTAAGCACGGATTTAAAGTCGGCATGAAACTTGAAGCAGTGGATCGTAAAAACCCTGATCTAATATGTGTTGCCACGGTGACAAATGTGATTGGCAACCATTTCCTTGTTCACTTTGATGAATGGGATGATTCCTATGACTACTGGTGTCAGGGATGTCCTTATATCCACCCAGTGGGGTGGTGTGCAGAAAATGGAAAGAAACTGAACCCACCAACCGATGACGAGGTTTATACTTTTCAATGGGAGCAGTATCTGCGGGACACTGGAACCGTAGCAGCATCTCCTGATTTGTTTAAGAAGCGCCCCATGCCAAGTTTCAAGGCTGGAGAAAAATTAGAAGCTGTGGACAAGAGAAACCCCTCCCTTGTGCGTGCAGCCCGTGTCGCGAGCGTTGAGGAGTACAGAGTGAAGATACACTTTGATGGATGGGATGATATCTATGACGATTGGTTCGATGCAGACTCAAATGATTTGCACCCTGTGGGGTGGTGTGAGAAAACAGGACATCCTTTGGAGACCCCACTCACAACACGTGAGAAAATCTCCAGCGCGGCTTGTCCAACTCCTGGCTGTAAAGGAATCGGTCACGTGAAGGGTGCGAAGTATTCCACACATCACAGTACATTTGGTTGTCCTTACTCGCTACAAAACCTGAACAAAGACTCATGTCTTGTGGATCGACTCTCCAACAACTCCATGACTGAGGAATCTGATTGGTCCTACGCTTCCAAACAAAGGCTACTGGGGGCAAGGAAGTAG

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q96JM7	Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens OX=9606 GN=L3MBTL3 PE=1 SV=2
Q8BLB7	Lethal(3)malignant brain tumor-like protein 3 OS=Mus musculus OX=10090 GN=L3mbtl3 PE=1 SV=1
Q8NA19	Lethal(3)malignant brain tumor-like protein 4 OS=Homo sapiens OX=9606 GN=L3MBTL4 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	zf-C2HC

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02820	MBT	mbt repeat	Domain	Interproscan
PF01530	zf-C2HC	Zinc finger, C2HC type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002515	Repeat	Zinc finger, C2H2C-type	Interproscan
IPR004092	Repeat	Mbt repeat	Interproscan
IPR050548	Family	Polycomb group and chromatin remodeling factors	Interproscan
IPR036060	Homologous_superfamily	Zinc finger, C2H2C-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12247	POLYCOMB GROUP PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24387	L3MBTL; lethal(3)malignant brain tumor-like protein	-	Chromosome and associated proteins	ko03036	deepkoala