Gene detail

Detailed information of XP_044170009.1 in Acropora millepora

Genomic Location: NW_025322816.1:180615...190546
NR annotation: XP_044170009.1, uncharacterized protein LOC122954055 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044170009.1

ATGGCGTCCGCTAGAAAAACTTCCGCATCTCAGGAAATTTCTCCCTCTTTTGACAAACTGTTAAAGGATGTCATTGCCAATTTGAGCCCAGAAGAACTAAAGCACGCTGTGTCGTCTATCAAAACCAATTTCGAGCGAAAGTTCACTTCTACAAATGATCAAGATTTATACTCGTGTTTATATCTGTTGGCCAACCAAGGCGTCTTTTCAGAAGACAACCTAACGTTGTTAGAAAAGTTTGTTGTTACTCCGAACACATCCAGGAAAGCCACGATTGAGGCCAAAATTCACAATTTCAAAGCCGCACGGCCGTTGCAAGAATCAAGAAAACAAGAACTAACTGGAAGAAATCGTGACTTGACGAATGTTATATCGATGCTAAAAACGGATCGATCAAGCATACTTAACTTGTATGGATCCAGTGGTGTCGGAAAGACTAGGCTCGCCACAGAAGCATTTTCACAGTGGAGTGGGCCTAAATTCAAAGTTGACTTGAGAGAAATAGATGAAATGAAGGACGTTCATTTCCAAGTTTTTCTTGCATTATCAGAAAGATCAGGGCCTGAGCTAGAAGTGAATTACGAGGCAAACACAGTTATTGCTAAAATGGAACACTTCAAGCGGAACAGTGAAAGAGAGATCCTTCTCTTCTTAGACAATGCTGATAAGTTCGTAGCTGCAGCCAATGAATTAAATGCAAGCTTTGGTTCGTTTCTGGATCGACTCCTTAGTTATCCATCTGGGAAAACAACTCAAACTAAATTAAAGATCTTGTTGACATCCAGAAGCGAGTTTCGTCATGATATTTCATTGAAAGTACAAAATCACGAATTGAGAGCCTTAGAGAAGGAATCTTCAGATAAACTGCTTCAAAACCAGGGAGGAATATCTGAAGTTTCTATCAACCAACGGGAAAAACTAGTGGACATGTGCAAAGGAAAACCTTTGTTACTGAATGGAATGGCGGCCATTTTGAGACAGCAGATGGCAAATGCTGATAGACCCGTAAAGACAATCGAGGAAGTACTTGATGTGCCGCAGACCCTAGAAACGGGACCGGCAGCTAAAGAAGCTGAAAAGTCAGAAAGATTTGACGTTGACGAAGAAGGGATTGACCTGGAACAGCTATCATGTCTTAGGAAAATATTTTTTTGCCTTCCAAGTAACACACTCAAAGAATCTGCTGTTTCCTTGTCGTTGTTTTGTCGACCGTTTACTGTAGAGACAGCTGCTAGGATTTTGGACGTGGACTCCTCGGAAGCTGCAATTCGTCTAGAAGGAATGCGGAACAGTCAAGTAATCACAATGACTGAAGATCATGAAGAACTCAATTATGACATTCATCCGTTGATGCGAAAATTTCTCAAAAGCATCGGTAACAGAAAAATGTTTTTCAGTGCCTTTGAGAAGTCCAAGGAGAACTTTTCAAAACATTTTTTTTCTAGGCTCACTGAGCTTTCTTCACTTTTGGACAGGGACTTCGTAAAAGCTTCTGAAAGCTTTGAAGTCGAGAGACAAAACTTTGAACTTGCTTTGGACATTTCGTTGAAGTTGGAGGTTTTGCTCATTTCGAAGGAACATCACGAAAGTGTCAAGATTTGTTACTTCTTGGAGGCCATGCTTGATGTTAAACAAAGAAGGAGAATCTTCCGCGCATGGGCTGATAAAGCAATGGAAGACTGTGTATTTCGAAGCGAAATGCGTTGTCAGGAAGCCTTGCAAGTTCTTAAACTTGAAGGATGGCGTAATGCAGCTAAGGTGCTGAAAGAACCGAAGGAGATCCTCAGCCGAATGCCAAAGGATAGCAAGAAGACGGATTCCTTCAAGCTAGCTAGAAGTTCATTCCTGTTTGCTGAGGGTGCAGTCTTTTATGCAGGTGGGAATTTTCCGAGAGCGCTTAAAGTCTTGAACAAATCCCTCAAGATAATGGAAGTTCTGCTAAAAAGCCACACAAGCACCTCTCGATGCCTGAATGTAATCGGTAATTGCTACAGTACACTGAAGCAACCTAAGGAAGCAATTAAGTATTACGAAAGAGCGTCGGCAATGCGAAAAGAGCTCTCGCCTTCAGGAGAGCATTGTGACATGCCACTTTTCCAAAGTCAAATCGGAACAGTTTATGAAGCAGAGAAAAACTTTCATGAGGCTATTGATTATTATAAAAAGGCGTTGGATCTTGCAGGGAAGCTTAAACTCCCTGGGCTCTTATATGCAGCGCTTTACAACAGGAACATCGGAAATGCATATGCTTGGCTGGAACAGTACGATCAGGCACACGAATACGCCAAAAAAGCATATACCATTAGGAAAGACGTCCTCGGCAACCACCCATTAACTGCCCGGAGTGTCTTTCAAATGGCGGAAATCTGTATCTATCTCCATGAGTTTGACGAGGCGGATGAATACTATGAAGAAGCTTGGGAGATTGAGAAAACCTTGGGACAAGGAAACCACAGCGAGGTGCGTGACAGGATCATTTCAAGTTACATGAACAACCTAAGTGGACGGAGGAAGAAGGCCTTCGAAGAGGAAGTGTTTGAATTTTACAAGCGTTGCTGGGACGAAGAAAGAAGCTGTGAGGACTTTGCGTTCACGCAAGCTAACAAGAACATCATTGATCATATCAATGAACGACTGGAGAGCGGCGGGGGTGACAAAGAGATGAAGAAAAAATATCAACGTGAGGCACTTTGGTTTTACGAGGGAACGTGGAAGTCACCTCACACTAAAAGGCTTCCTTACAAGTTTAGAGAAGACATCATAACGACTCTATTGATGTTATGCCGCAAACTTGGTGAAAATGAATTGCTAAGAAAGTACAAAGTCAGTGAATTTAAATTCTACGAGAAAAGATGGAAGAAAGACAAAAAAGACATGAAACGCGAAGATAAAATTTATATCCTTGGTCTCCTAGTGAAACGTGCGACATTTCTTTGTTATGACGAGAAGGTAGCCAAGTACGACAGGCTTTTGCAGGAAGTCGAGAAACCATCAGGATATTTTCTTCGGTCTTCGTTAACGTTTGGAGCAGGAGCGCCTGATACTGATTACGACGACGACGACGACATAAGCGATGAAAGTGATATTGAAGCTGGTGGTTCTGTTGGTAATGATGATGACGATGTCGACGATGATGATGAAGTTGGCGATGAAGAGGAGAAGAAGGAGGAAGAAGAGGACAAGGAAGTATTTGAAGAGGGGATGGAAGACAGTGGAAATGAGGAGGAGAACGGCGAAGGTGGTGTCCAAGCTGGGGAAGTGGACACACATGAGCAGTGGGACTACGAAAAGGACAACACTGATGGTGAATTCGGCGAGGAGATGACTCAGACGACAGTACAAGATGTCAATCAGGAAATCCACTCATTACAGCTGGAGGAACAAGAGGAACCAATTGCAGAACATCCCTTGAAAACAACAATATTCGAAGGAGTGGTGACAAGTGAGGGCATCCACTTAGACCTTTACCGTTGGGGCGTTCATCTAACCTTCCCTCCTGGTTCCGTAACTGAGTCCACCACCATAATGGTCCACAGATGGGAATACGGTGCCTGTTTACCTACCCTCGGCGAACACGAAGCCGTCGTGAGTAATGTGATTGAGATAGCTGCTAACAAAGAGGTCGAGGCCTTAGAATTTGAAGATGAAGTAAAGCTGGCTCTTTCACACAGTGCTCCAGATCTTGAAGGTTACGAACTGGTGGTTAAAAAACTGTTGGATGCGGAGACCAACGAATGGGACGAAGTTGATGGATGTGAAAACATTCGAGGAATCTCAGGTTTCTCTTTCAGTGATATCGAAGACGATTACCCAACTACAGACAAAGTTCCAAATTTTTTGTTCCCTGTGGTGCAAGCTGGCATTTTGGAATGTTCAACATACGCTGTGGTTTCTCGACTAAAGGTATCACCAACATACACCATCACAGTCAATGGTGGTACATTTGGTCATCCCGATTATCCTCAAGTGGCAATCACAGTGCCCAAAAAAGCTGTTGGAACCAAAACTAAGCTTTCTTTGCAACTTAAGGTCCAAGAGGTTCCCCAGGATGAATTTCAGGATCTCCATTTGTTTGCTGGACCAATATTGCATATTAGTGACTCTTCAAAGGCCGAGTTTTTAAAGCCTGTTACAGTACAGCTACCAGTTTGTCTTCGCGAGAAGACGCCGACTATTCCCAATCCTTCGATGTGGCGTGCAAGAATATTTTATCTTCGCTCTGAGACAGAATCAAAGGAGTGGATTGAGATTTCTAGTGAGCTTGACAACCCTGCAACTTATGATGGCAAGGTTGTTAGGTTTCAGGTCCGACGCTTTTCTGGGTATGTGGAAAGGTACGCATGTTTCCTTGATTGGTGCGGAGATGACTTGCGCTCTAAGACTTACGATATTATTGACTATCTGTGGAGCATTGTACGAAATCAACCTCTAGAGGCAAGCTTTTTCGCTTACTTTGATCCGAAGAAACGGCGTCATTATCAAGGTGTCTTGCATCTTATCTGCTGTCCCGCTCACCTCCGAAAAGAAGTCAAAGAAGAGATCTTGGATGAGTTTGGAAAGGAGGGAAATTGTATGAGTGAAGTCAGTTCGAAAAGATTGATGATCCCTGAGCGTGATAAGGCATTTGTGTCTGTGTCTGGAGGAATCAACACTTTGGAAGATACGGAAGATTTTTATCTGAGGTTTGTTCAAACATTCTCAAGAGTGAAAAACAAAATGGTTCAATGCTGCGTGTCGCCGCTTAGTATCGAATAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00791	ZU5	ZU5 domain	Family	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR000906	Domain	ZU5 domain	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan