Gene detail

Detailed information of XP_044173010.1 in Acropora millepora

Genomic Location: NC_058067.1:25602787...25620872
NR annotation: XP_044173010.1, fibropellin-1-like isoform X16 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044173010.1

ATGAATTTGACATCTTACATCTTGGTCTTGATTCTGGTGTTCACTTTGGTTCTTACACATGAGGCAAATGGTCTAAAAAATTGTTCACTCAAAGTCAAAGCACATGGCTGTTTCGAAGACAAGCAGTCGCGAGTTCTTAAACATCTCATCCTCAACAGACGAGGCGCCGTAAATTGGACCCACTATGACAACTTCCTTGAGAGATTTGTCTGTGATTGTGCGAAAGTAGCAGAAAAGAAAGGATTCAAAGTGTTTGGTATTCAATATTACGCCGAATGTTGGGGAAACAGGACTTTCACTAAGGAATCCCTGCCCCAAGAGAAACCAATGGATTGTCTGAGTGGAGATCTATCCACGACATGTCCTAGTACAGGCCCAGACAGGGTATGCACTGGAAAAGTCTGGAGAAACTTTGTGTTTTCTTTAGAGAAGCCTAATGCATGTACCAGCAAGCCTTGCAAGAATGGTGGGAGCTGTGAAGTGAGTGGGCAAGACAGTTTCACTTGCAAATGTAGCAAGGGATTTCACGGAAAAAACTGCGATAAAGTGGATGCGTGCGATAGTCAACCTTGTCACAACGGAGCATCTTGTAAGATAACTGGAAATAACACTTATGAATGTCAATGTTCTGCAAGATATTTTGGATCCAACTGTGAAAACGTGGATGCTTGCAGTAGACTTCCCTGTAAGAATGGAGCAACATGCAGTAGAACTGGAAATAACACGTATAGCTGTAAATGTACCATGGGATATTCTGGACAAAATTGCAGTGAAGTGAATCGATGTATAACCAGCTCGCCTTGCCAGAACGGAGGCACCTGTACCAGCACTGGAAACAGCAGCTACACGTGTCGCTGTCCCGAGGGATTTTATGGATTCAACTGCGAGAAAGTGGATGCTTGCAGTAGACTTCCCTGTAAGAACGGAGCAACATGCAGTAGAACTGGAAGTAACACATATAGCTGTAAATGTATCATGGGTTATTTTGGACAAAATTGCAGTGAAGTGAATCGATGTATAATCAGCCCTCCTTGCCAGAACGGAGGCGCCTGTACCAGCACTGGAAACAGCAGCTACACGTGTCGCTGTTCCGAGAGATTTTATGGATTCAACTGCGAGAAAATGGATGCTTGCAGTAGACTTCCCTGTAAGAACGGAGCAACATGCAGTAGAACTGGAAATAACACATATAGCTGTAAATGTATCATGGGATATTCTGGTCAAAATTGCAGTGAAGTGAATCGATGTATAATCAGCCCTCCTTGCCAGAACGGAGGCACCTGTACCAGCACTGGAAACAGCAGCTACACGTGTCGCTGTCCCAAGGCATTTTATGGATTCAACTGCGAGAAAGTGGATGCTTGCAGTAGACTTCCCTGTAAGAACGGAGCAACATGCAGTAGAACTGGAAATAACACGTATAGCTGTAAATGTATCATGGGATATTTTGGACAAAATTGCAGTGAAGAGAATCGATGTATAACCAGCTCGCCTTGCCAGAACGGAGGCACCTGTACCAGCACTGGAAACAGCAGCTACATGTGTCGCTGTCCCGAGGGATTTTATGGATTCAACTGCGAGAAAGTGGATGCTTGCAGTAGACTTCCCTGTAAGAATGGAGCAACATGCAGTAGAACTGGAAATAACACGTATACCTGTAAATGTATCATGGGATATTTTGGACAAAATTGCAGTGAAGTGAATCGATGTATAATCAGCCCTCCTTGCCAGAACGGAGGCACCTGTACCAGCACTGGAAACAGCAGCTACACGTGTCGCTGTCCCGAGGGATTTTATGGATTCAACTGCGAGAAAATGGATGCTTGCAGTAGACTTCCCTGTAAGAACGGAGCAACATGCAGTAGAACTGGAAATAACACATATAGCTGTAAATGTATCATGGGATATTCTGGACAAAATTGCAGTGAAGTGAATCGATGTATAATCAGCCCTCGTTGCCTGAACGGAGGCACCTGTACCAGCACTGGAAACAGCAGCTACACGTGTGGCTGTCCCGAGGGATTTTATGGTTTCAACTGCGAGAAAGATTGCTCCTATCCGATGGACATCGCCCTGGCCATTGACTCATCCGGGAGTGTTGGACGTCGTTCCTTCCAGTTGGTGAAAGCGTTCCTGAAGGTGTTCACGCATCATTTTGAAGTGACTAACACGACTCACTTTGCATGCCTCCACTACGATCACAGAGTTTACAAAAATTTCAAATTCAAGGACACTCAGTATCATAACCACCCCAGTCTCGATGCAAAGATACAAAGCATGCGGTATCTCGGGGGAGCCACTCTTACAAATCAAGCCTTGACCGTAGCGAAAACGTTCTTCTTCAGACGAAATGGAGCGCGCAACAAAAGAAAAGTTAAACGCGCCGTGGTGCTCATGACGGACGGTAAAACGTACTACGGTGTGCCAAGCCTTGTTCACCCTACATACGAGTTGAAGGAAATTATGTCTGCAAAAATTGTGGCAATTGGGGTCGGCCCGTATGTGAGCTTGAAGGAACTACAAGTTATGGCTGATGGACACTACGTGCTAGTGGAGGACTTTAACAAACTTGCCAAAGCCATTACTGATGTCATGGATCTTGTGTGTCAATGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR003645	Domain	Follistatin-like, N-terminal	Interproscan
IPR051355	Family	Notch and Slit guidance protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836	SLIT HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan