Gene detail

Detailed information of XP_044173452.1 in Acropora millepora

Genomic Location: NC_058067.1:457601...459961
NR annotation: XP_044173452.1, NACHT, LRR and PYD domains-containing protein 12-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044173452.1

ATGGATAATCTTCAGTTTGATGCTAATCAGATGAATTCAGATGAACTACACCAAGCACAATCAGAAGAGGTGCCTGTGGAAGAACAACATCAACACTCTCGACCGCAAAATGATTTCCAAAGTGCCATACAGACACTGAAAGAGAATTGCTTGCGGGACACCGAGAAGCTAAGTGATTTCAAACAACCTTTTCGACCACCAAATCACGGCGAAGGCCACAGTCATGGCCTCACAATGGACGAGATCTATATCCATGTAGTGATCTTTGAAGGCAGACTTTACTATGCGTTAAATGAGGAAGGCAGGTATGATCAGCTCATAGAATACCCCCCAGATGCTGATGACATTCTCCTCAAAAATCCAGAGGATATTATTGACAAACAAAATGTCAAGGTTCTCGCTGTTGGCCGTCCTGGGATAGGAAAGACGTTATTGAGCACAAAGTTGCTCCGACTTTGGGCATCTGGTGAAGCTCTTGACGTCTTTAATGTTGTCTTACTCGTGAAGTTTAGGCGCTTTAATGACAACGCAGAGATGAGCCTCCGTGATCTTTTGGCTTGCGCAGAAACAGTCCAGAAGGATATCAACGCCCCAGAAGATAACTCAACTTACACAAACTATGTCGAAGAGAAGATGCCACTTTTCGTTTTGTATAACAAACTGGCGGCGGGAAAACTTCTTCCTGGTGCGAGCATACTCACGACAACACAACCAACTGCTGTGGAATGTGTTGATCATATAGATTTTCAAAAAACAGTCGAAATTTGCGGATTTACGTCCGAGGATGTTAAAGAATATGTTGAGAAGTTCGCTCGAGGTGTTAGTGGAGCCCTGGAGAAAATGTGGGAACACATCAAGTCCAACATTAACTTGTTTACATTTTGCTACATCCCAATGAACTGTTTTCTCATTTGCCACTGCTTGCTTCAAGTTATCCTTTCTGAGTCTTCCCAGCCACTGCCAAAAAAAATTACAGACATTTATGAAATGACCGTAAAGATGTTCTTCTTCAGTCACAACAGAGAAGGTGTTTCTCAAAAGGAACTCGAAAAGCTCAAGTCAAAGTACATGTATCAGCCATTTGAAAAGTTCCCTGAAGAACTTCAAAAAATCTGCAACAGGCTTGGAGAAGTCGCCTTTAAAGGGATTCAAGAAGAAAGATTACTCTTTGAATCAAGCGAAGTCAAAGGGTTAGAAGATTTTGGACTGCTTCACAAATTGCCAGACGTACAATCAAAGCGATCCTTGAATGACCCACCAAAGTCCCAGTTCTGTTTTACTCACCTGACGGTGCAAGAATTCTTTGCCGCAAAGTATCTTGTGGACACCAGGACAGATGAGGGAATTGAAGAATTTGTTTGCAAGTATATCAATGACGGCACATGGCAAGTGGCACTGCAGTTCGTAGCCGGATTGTTGAAGAGCCCCCTAAGCAGCGACATTTTTATCAAACTGTTGCCGCAGTCGACTCAGAAGAGAGCAAACGATGAGTCTTCAGAACCAGAAACACTGACCTTTTGGCCAGCGACAAAAGAAGACGGAAATCTAGCTGTGCAAGTATGTAAGTGTCTTTACGAGATTCACGATGAACAGCAGCCAATATTGCAAAACAAAATTAAATTCAGCGCGGTTGAATTTATTGATTGTTTACTCAAACCATTTGATGTTGCTGCTATCTTTCATTTTTTAGAAAATGTTGAAGACGTTTTGTTCATTAATTTGTTCGAACACGATTTTCAAGATTGGGGCGCAAAAGAAGTGAAAAAATTTATTGTTAACGGGGAACGCAAACTAAAAATTTTAGGCCTCGGTGAAAACGACTTGACCGACAATGCGGTTGAGGATCTTGCTGCAGCTCTCAAGCACAATAATTGTAACCTAGAATCGTTAAACCTTAGTGGTAACAACTTGACCGACAAAGCAGCGAAGGATTTGGCTGCCGCACTTAAGCACAGTAATTGTAAATTAAAATCGTTAGGCCTCACTTGTAACCTCTTCACCGACAAAGCAGCTGAGGATTTGGCTGAAGCACTTAAGCACAGTACTTGTAAACTACAATTGTTGGCCCTTTGTAATAACAAATTCACCGACAAAGCAGCCCAGGATTTGGCTGCAGCAATTAAGCACAATAATTGTAAGCTAGAATCGATAACGTTAAGCCTTTATAAGTGCAACTTAACAATGAAGGGACTTCAGTATTTAGCTGACGCACAAAAGCAAAGTAATTGCATAGTTTTGGGGCTGGAGAGACTAGGATTCTCACATGCTTAA

Transcript

Protein

Uniprot

Uniprot term	Description
P59046	NACHT, LRR and PYD domains-containing protein 12 OS=Homo sapiens OX=9606 GN=NLRP12 PE=1 SV=2
D4A523	NACHT, LRR and PYD domains-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Nlrp3 PE=3 SV=2
Q8R4B8	NACHT, LRR and PYD domains-containing protein 3 OS=Mus musculus OX=10090 GN=Nlrp3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR051261	Family	NOD-like receptor (NLR)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24106	NACHT, LRR AND CARD DOMAINS-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08727	NOD1, CARD4; nucleotide-binding oligomerization domain-containing protein 1	-	Pattern recognition receptors	ko04054	deepkoala