Detailed information of XP_044174739.1 in Acropora millepora

Genomic Location: NC_058069.1:17273300...17300046
NR annotation: XP_044174739.1, DNA-directed RNA polymerase III subunit RPC2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NW08DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens OX=9606 GN=POLR3B PE=1 SV=2
P59470DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus OX=10090 GN=Polr3b PE=1 SV=2
P25167DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster OX=7227 GN=Polr3B PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF04567RNA_pol_Rpb2_5RNA polymerase Rpb2, domain 5DomainInterproscan
PF04566RNA_pol_Rpb2_4RNA polymerase Rpb2, domain 4DomainInterproscan
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR007647DomainRNA polymerase Rpb2, domain 5Interproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR007646DomainRNA polymerase Rpb2, domain 4Interproscan
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR014724Homologous_superfamilyRNA polymerase Rpb2, OB-foldInterproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan
IPR007121Conserved_siteRNA polymerase, beta subunit, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03021RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2EC:2.7.7.6
Transcription machineryko03021deepkoala

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