Detailed information of XP_044176275.1 in Acropora millepora

Genomic Location: NC_058070.1:5286821...5303628
NR annotation: XP_044176275.1, LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit pan3-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A1L1C7PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1
Q58A45PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
Q640Q5PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18101Pan3_PKPan3 Pseudokinase domainDomainInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR041332DomainPan3 pseudokinase domainInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR030844FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12272DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12572PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3-Messenger RNA biogenesisko03019deepkoala

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