Gene detail

Detailed information of XP_044177184.1 in Acropora millepora

Genomic Location: NC_058070.1:20243471...20301766
NR annotation: XP_044177184.1, slit homolog 3 protein-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_044177184.1

ATGATGTTACCCCTGATTTTGCTACTTGCTGTACTCCATGGTAGTAAACAGTGTCCGACACAATGCAAATGTCCTTCATTTAATTTACGAGTAAAATGCGAGGGTATAAAAACAGTACCAAAAGGAATTCCTCCCAACACATCGACCTTGGATTTATCGGGGAATTCGTTAAAAGCAATCCGTGAGGGAGACTTTGAAAACTTACCTTTACTGGCGAAATTGGATCTTTCAAAAAATCATTTGGAATACATTGCAGAGACTGCTTTCAAGAATCTGACGTCCCTTCAATTCCTGGATTTATCGGAGAATTGGTTGAAAGAAATCCAAGAAGGAACCTTTGAAAACTTACTTGCATTGTCGAAATTGGATCTTTCAAAAAATCAGTTGGAGTTCATTGCAAAGAATGTTTTCAAGAATCTGACGTCCCTTCAATTCCTGGATTTATCGGTGAATTCGTTGAAAGCAATCCAAGAAGGAACCTTTGAAAACTTATTTTTATTGTCGAAATTGGATCTTTCAAAAAATCAGTTGGAGTTCATTGCAAAGATTGCTTTTAAGAATCTGACGTCCCTTCAATTCCTGGATTTATCGGAGAATTGGTTGAAAGAAATCCAAGAAGGAACCTTTGAAAACTTACTTGCATTGTCGAAATTGGATCTTTCAAAAAATCATTTGGAATACATTGAAGAGACTGCTTTCAAGAATCTGACGTCCCTTCAATTCCTGGATTTATCGGAGAATTCGTTGAAAGCAATCCAAGAAGGAACCTTTGAAAACTTACTTTTATTGTCGAGATTGGATCTTTCAAAAAATCAGTTGGAGTTCATTGCAAAGAATGTTTTCAAGAATCTGACTTCCCTTAAGTTGCTGGATTTATCGGAGAATTCGTTGAAAGCAATCCAAGAAGGAACCTTTGAAAACTTACTTTTATTGTCGAGATTGAATCTTTCAAAAAATCATTTGGAGCTTATCGGAAAGAATACTTTCAAGAATCTGACGTCCCTTTATTTACTGGATTTATCGGAGAATTCGTTGAAAGCAATCCAAGAAGGAGCCTTTGAAAATTTACTTTTATTGTCGAAATTGAATCTTTCAAAAAATCAGTTGGAGTTCATTGCAAAGAATACTTTCAAGAATCTGACTTCCCTTCGTTTGCTGGATTTATGGGAGAATTCGTTGAAAGCAATTCAAGAAGGAACCTTTGAAAATTTACTTTTATTGTTGAAATTGGATATTTCAGAAAATCGTTTGAAGTTTATCGGAAAGAATGCTTTCAAGAATCTGACGTCCCTTCATTTGCTCCGTCTTTCGAACAACGATATCAAGGGATCATTTCATCTTCCTTCAAAGGTCACTACTCTCCTTCTCCAGAACAATGTCTTTTCACTACCTGACTTGAAAATCATTCTCAGAGGATTGAAGCGTCTAGTCTATTTGAATATTGAATATAACAGAATGATTGGACCCAATTTTACAGCCGACGTTTTTGTGGATTCGGGCAATATGGTTGATCTGACTATGGACAACTGTGATTTGGAAAATATTGAAAGTGGAACGTTCAGTCGGATGCATATTTTAAGTAGGCTATCCCTATCTGGTAACAAGTTATCTCACATTCAAAGGGGTATGTTCGATGGAATCGGCAGCAATCTCCATGAGTTGTACCTAACATCAAATCAAATAGTGTCCGTGGAGGACGGGACTTTTGAACAACTTGGGCCGTTAGGAAAACTGACCCTGGCATACAACTCCTTATCATCGGCACCAGATCTGACTGGACTAAATTCTTCCACATATATACTTCTGGACCATAACAAGATTACCGATCTACGACCTCTTGGGAAATCTGGAAACATGGAATTCATCGGATTGAAACTGGGCAACAATAGGATCGAGTACATTCCACCAGACTTGTTCCAAAAAATTACTATCAAAGGATGGCTGGATTTGTCAGTCAATAAATTACGGAGCATACCCCATAACTTGTTTTTTCGTTCCAGTCATCTGTCATTCCTGGGTCTAAGTTCTAACTACATCAGTAAGATCGACAATGAAAGCTTTGCTGGACTTAAAACTCTTCAGACTTTGATGATGGCAAAAAACAATCTGACGTTTTTAGCGAATGATACTTTCCAAGGCATAACTCTGCAAGCCTTGCTTCTACACAGCAACGCAATCAAGAAAATCGATGTCAGAGCTTTTGCTGGACTCTATGAGCTCAAATCATTAACACTCTTTGACAACCTATTGACGTCATTGCCAGATGGTATATTTAATGATATAACATCCAAAACAAGAGTGTCAATAACTTGCAGTCAACTGAAAACACTTCCTCTTGGAACATACAATTCAGTTATTGAATGTGCCCCGTCAACAACTTTTCATTTTACCATCCCATACGCTAATGAAGGCTTTGTGCCACAGGCATTTGCCGATACAGGGTTTGAATGTCGTAATGGCAAAGCTGAAATCTATAATTGTAGTCTTTGTCAAGCAGGGACATTCAATCGACAATTTCAGTGTCTTCCTTGTGCAGCAGGAGGTTTCTATCAAGACAAAATGGGACAGGCGGAATGCAAAAAATGCAGTCCTGGAACTTACGTCTCAGTGGATCGTCAACCCGGTAGTACAGCAAGTGATTGCCGTGCATGTCCATACGGTACCCTATCCAATGAAACCGCTGGCTATCGTGCTTGCAAATGCCTTCACGGCTTTTACCGGATGGATCGTTTTGGACCTTGCACACCATGCCCAGCCCATGGGCTGGTTTGTGTCAACGATACCGCGGTTTTAGCGCCCAATTATTACTGGAAGTGGATTAACAAAAGCCATGAAGATCTGTACATAAACTTTTCAGCCAACATCCATTATTTCAAGCCTGATTATAATGTTCAGTTCTCCAGGTTTCCCTTTTTACTACCACAACCACTAAGATGTCCACTAGCAGGTTCATGTAAAGGTGGGATCGATTCAGAATGCCATGAGAGATATGAAGGAACCTTGTGCGCTTCTTGCAAGAATGGCTTTTACTTTCGGTTCAACAGTTGCTTTAAGTGTCCAAGCCTGGCTAATTCCATTATTTCATCTCTTTTGGTGGTTGCTCTCTTTGTCCTTGTCTTTCTGATGGTTCTATGGGGCGACTCAAGGAAGGCGGAGAATAATCGCACTGTCGCAGACGTTATCATGTCGTGTTTCAAAATCGTGATTGGATTTTATCAAGTCATCGCTGGTATATTTTCAGCTTTGACGAGAGTTCGATGGCCAGTAACATTGATATCAATGGAAAAGTATTTAAAATTGATGGAGGGAAATATATTTCAGTTTGCTCCATTAAGCTGCATTCACTCACGCCTTCGAATGGACCCTTTCTCTATCTTTTTTGTGACTCTTGCTGTGAACTCATTAGTCATTTCTCTGATTTTCATTTACCTCTTCCTTAAACGTCGTCATATCAAAAAGAGACGGAGCTTAACCGGGAGAGAAAAGCTATGCGCAGAGTCGTCTTTGAAGAGATCCTGTTATCGGAACATTTTCTTGTTTCTTATGGCCTCTTATCCCGTGACAAGCAAAATCATCATTCAGATCCTACCTCTTCCCGGAGCATGTGTCCAGCAATGTTTTACAGATGAGCCGAGTAACTGTATTTCTCTACTTAAGGCTGACTACTCCATCCGGTGTTTCACCAAACTACACAAGGTATACTGGCCCATTGGCGCTACTTTTGCTTTGTATCCTGTTGCTTTTCCTCTGTTGATACTGGTTCTTCTTTACAAATTCCGCGACTCACAGGAAGATAAGGGAGTTGCTTTTGGGCTCAGAGTGTTCTTTGAAAACTACAAGAAAGAGTTTTGGTTTTGGGAGGTCCCAGAGATGTATCGTAAACTGATTTTAATCTCTCTGATAAATCTGCTTGAATCAGAAAGTTCTTCACAGATAGCCGTTACCATGTTGACTGTGAGTGCATTTGGCATAGCCTATACCTTCTTCCGTCCCATGAAAGAAAAGTTTGAAGATCGACTCCATACGTTCGTTTTGTGGGTTATCTTTTTCGACGTTTGTCTTGGGGGAGTATACACCACATTTGAAGGGACTCATGAACAGAAGGAAAATGACTCATTATTCGTGAATATCCTTTTCGTGGTCCTCAACAGCTTTGTGCTGCTTGTTGCCTTGGGCAAAGGAATTGCTCACTGCAAATTCGTTTGGATAACAGTTTCTGCATGTTTGATGCAAGGTCTACATGTCATCTGTCAAGGGATTCGATCTCTGAAAATGAAGAATTTACGCTGGTTCAAATACCTGTGGCTTTCCTCTGCGGACAAGCCTGGCGAAAAAGCGCTCTTGATCTCAAATACTTCATATGGAAGTTTACACTACTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF13306	LRR_5	BspA type Leucine rich repeat region (6 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR026906	Repeat	BspA-type LRR region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45617	LEUCINE RICH REPEAT FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08455	ADGRG4, GPR112; adhesion G-protein coupled receptor G4	-	G protein-coupled receptors	ko04030	deepkoala