Detailed information of XP_044177788.1 in Acropora millepora

Genomic Location: NC_058071.1:9856837...9868169
NR annotation: XP_044177788.1, branchpoint-bridging protein-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O65639Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1
Q94C69Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1
P72366Cold shock-like protein CspA OS=Stigmatella aurantiaca (strain DW4/3-1) OX=378806 GN=cspA PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR011129DomainCold shock domainInterproscan
IPR051373FamilyLin-28 homolog RNA-binding proteinInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46109PROTEIN LIN-28Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan

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