Gene detail

Detailed information of XP_048575736.1 in Nematostella vectensis

Genomic Location: NC_064045.1:4539934...4546185
NR annotation: XP_048575736.1, uncharacterized protein LOC5509623 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5509623

ATGTTGCGGCGTGTGGTGGTAGAAAATTATGTGATATTCAAAGGCAGACATGAGTTAGACTTCATGGGAAGAGATGGCTGCAACTTCTACACCTTTGTAGGTGAGAATGCCAGTGGAAAAAGTAGCTTGGTCGCCTTAATTAAAGCTGCAAGTAACTTGCAAGAGGAGGGACCAGACTTTGAAGTGATTGATAATTGTAAAGAGTCCAAGGTTGTTTGTGAATTTGAGTTTAAAAACGGTGCGGAGTTGATACGACATTGTGATCACTGCAATGAGGCATCAGCTACACAGTTAGTATCTCCTGGTCTGAGTTCCTGGTTTTCAGACGACATCCTGAAAATCCCAACGCCATTCTTTGACCAGATCTTTGAATATTGTAGAGGTGGAACAAAACGGATCCAGGTACTTGCTGGTCATCGACATCAGTCATTACCACAAACAACAGAGTCTAGTAGGAGAAAAGAAAATGAAGTAGATAGAATTTCTAATTCTCAGTTCTTGTATATTCTTATGGATGATGGTATTCTTGTTGCGACAAAATCCGGCGGACATCTTATCACAGGGTTTCATGAGCCTCTACCTGCGGGCGTGAACCCTGCTGACTGGGTGCCTCAAAAGTCATTCCTAATCAACCGCAGAGAGGTTCCTTACGCTTCTGAAGCCATTACCGATGGAGAGGTTTCCACCAATACCTCATGTGCAAGCTTGGATGATCTCTTCCACTCAAACATGCCCCGTAATGCCAGTATGCAATCTAACATTTCCATGGAAATGACAGCACATGACCAATCAGATGAAGGAGTAAGGCTACGTCACGCTAGTATTGACAGCTGTCGATCATCGCTAGCCTCTGTCCTGTTAAAAAGACCAGCATGGCGGCGCCAGTCAAGCTATGGCGGCCTTGCTTGGTCAAATTACCATGAGCTGAAGAAAATCATAGTGGCTGAGCTACTGCATGATTTTCCTGACGAGTCTGTTACTGAGATACACCCCTTGTTCCACGAGATCATCGGCGATAAGTCCATCACTTTTGAGACCCCCAAGGGTGAAGATGTCTTCCAGGTCATGGACAATAAAACAAAGCGCGTCATGCGTCGCATCCCAGAAGGTTTATTCAGCGCATTCATCATCGCCGCCTTGTTGGTAAAACCAAGCACGCGTAACGTGATCCTGGATGAGCCGACCCGCGGGATGCACCCGTTACAGACCCGCAGATTGCGCAATATCCTGATGCGTGAGTCAGTGCGCAGGCGCAAGTGCATCATAGCAACAACCCACTCGCCAGAGCTGCTGGATTGTGATAGGATCACGCTAATCTGGAGGTTTCAGCTGTTGCCTGATGGCTACTGTCAGATACGTCGCGTCACCGCGAGGTACTCCGAGAGAGAGCTACTTTTTATAGGTGCACCGGAAGTGCGTGAGATCTTCTTCAGCCGTCACATCATTTGGGTGGAAGGCGAGAGCGACAAGCGATTCATCGAGGCGTTACTAGGGCTCTTTGACGAGGGGCGTGGCGCGCTATTTAAAGCCCTTCAAGTTGAGCGGGCGGAGCGATCGTTTTCAAACGAAGATAGTAATAGGTCGTTATCCCCCGACTGGACACCCCCTCGGAGTCGAAGTCCATCCCCCACCCCCTCCCACAGGGGGAATGACGCATATGTGCAGAAACTGCTGCAGGATCCCGCGTATGAGCGCAAGTACTATACCGCGGAGGAACTTGGCATGATACAAGAAGCTGTGCGGAGTTGCAAGGTTTTAAGTGTTGGCGGTAAGATGAATCTATGGAAAGGCGCCGCCATTTGCCGCGATCTTCACATACCGTACGCCATCATATGCGACCTAGACGCAATCGTACCCAACTCCCGTGAAAACTCCATCCAGTCCCAGTTCGAAAGAGCCGAGGGAGACTGGTACTCCGCAAGTATCCCACACGCGAAAGCGAAACTCGTAGATGAGGAGGAGGCGCCAGCGTCTAAAGCAATCGATGAGACCGAGCATGCGCAGTTGGCGAAACTACGCTCGCTGCGAACTGTGGGGGAAGTGATTCGTTTTTACGAACAGAATCACTATATTTTCGCTTGGTGGCCCATGGGAGGGGAGATAGAGGACGCAGTTAGGCTTACCAAAGCCCAGTTCGGGAAGAAGCTCTGGCCAGATATGCTTTCCGAGGAGATTAAGTCATTTATCTTGTCACTCATTGACCCGCGCAAGCTCCTGATTAAGAACCCGAAGGACAAGGAGGCGAGCAAGGGACCGAATCTAGAAATTTTGAGGTGTATTTATTTTATTATACGATTCTTCAAAGAAACTCTAGAAAAGATTTCATAG

Transcript

rna-XM_048719779.1

ATACCGCACATAAGGATGCAGAATAGCATACGCGACACTCCGACATTTAGGTTTGCCGCTAGATCAACGCGTAAAACGGGCAAATCCCGCGCACCGCAGGACGATTAACAccgcaatattttatttttttacctcaATACCGCCATTAGAAAAGCAAAATCTCGCAGTGTTTTAAAAAACCGCATCACCGCatgttttttgctcttttaccGCAATATCGTATAAAAAGGCCAATACCGCATAATCACTCCgaaatgacgtcatcaggcCCGGTCACTCAGTATCGAAGATTCCTTTTCGAAGGGTAGTCAGCACTAACTTTTGCGCTGTAGAAACGACCTCAAGTCCAGATCAAAACATAAACATTCAAACAGAAATCCACTATATGTGACAACAGAAGACTTTAATTGAATTTTACATGGTTCAGATGGACTTATGATGAGATTGATTTGGTTTGTGTAGCCAGCATTTGCAGCCGGGTCGAACCTCCAAACCCGGCGACTGTTGTTTATAAACAAACTGTGACAAATCCACTTCACTATGTTGCGGCGTGTGGTGGTAGAAAATTATGTGATATTCAAAGGCAGACATGAGTTAGACTTCATGGGAAGAGATGGCTGCAACTTCTACACCTTTGTAGGTGAGAATGCCAGTGGAAAAAGTAGCTTGGTCGCCTTAATTAAAGCTGCAAGTAACTTGCAAGAGGAGGGACCAGACTTTGAAGTGATTGATAATTGTAAAGAGTCCAAGGTTGTTTGTGAATTTGAGTTTAAAAACGGTGCGGAGTTGATACGACATTGTGATCACTGCAATGAGGCATCAGCTACACAGTTAGTATCTCCTGGTCTGAGTTCCTGGTTTTCAGACGACATCCTGAAAATCCCAACGCCATTCTTTGACCAGATCTTTGAATATTGTAGAGGTGGAACAAAACGGATCCAGGTACTTGCTGGTCATCGACATCAGTCATTACCACAAACAACAGAGTCTAGTAggagaaaagaaaatgaagTAGATAGAATTTCTAATTCTCAGTTCTTGTATATTCTTATGGATGATGGTATTCTTGTTGCGACAAAATCCGGCGGACATCTTATCACAGGGTTTCATGAGCCTCTACCTGCGGGCGTGAACCCTGCTGACTGGGTGCCTCAAAAGTCATTCCTAATCAACCGCAGAGAGGTTCCTTACGCTTCTGAAGCCATTACCGATGGAGAGGTTTCCACCAATACCTCATGTGCAAGCTTGGATGATCTCTTCCACTCAAACATGCCCCGTAATGCCAGTATGCAATCTAACATTTCCATGGAAATGACAGCACATGACCAATCAGATGAAGGAGTAAGGCTACGTCACGCTAGTATTGACAGCTGTCGATCATCGCTAGCCTCTGTCCTGTTAAAAAGACCAGCATGGCGGCGCCAGTCAAGCTATGGCGGCCTTGCTTGGTCAAATTACCATGAGCTGAAGAAAATCATAGTGGCTGAGCTACTGCATGATTTTCCTGACGAGTCTGTTACTGAGATACACCCCTTGTTCCACGAGATCATCGGCGATAAGTCCATCACTTTTGAGACCCCCAAGGGTGAAGATGTCTTCCAGGTCATGGACAATAAAACAAAGCGCGTCATGCGTCGCATCCCAGAAGGTTTATTCAGCGCATTCATCATCGCCGCCTTGTTGGTAAAACCAAGCACGCGTAACGTGATCCTGGATGAGCCGACCCGCGGGATGCACCCGTTACAGACCCGCAGATTGCGCAATATCCTGATGCGTGAGTCAGTGCGCAGGCGCAAGTGCATCATAGCAACAACCCACTCGCCAGAGCTGCTGGATTGTGATAGGATCACGCTAATCTGGAGGTTTCAGCTGTTGCCTGATGGCTACTGTCAGATACGTCGCGTCACCGCGAGGTACTCCGAGAGAGAGCTACTTTTTATAGGTGCACCGGAAGTGCGTGAGATCTTCTTCAGCCGTCACATCATTTGGGTGGAAGGCGAGAGCGACAAGCGATTCATCGAGGCGTTACTAGGGCTCTTTGACGAGGGGCGTGGCGCGCTATTTAAAGCCCTTCAAGTTGAGCGGGCGGAGCgatcgttttcaaacgaaGATAGTAATAGGTCGTTATCCCCCGACTGGACACCCCCTCGGAGTCGAAGtccatcccccaccccctcccacaGGGGGAATGACGCATATGTGCAGAAACTGCTGCAGGATCCCGCGTATGAGCGCAAGTACTATACCGCGGAGGAACTTGGCATGATACAAGAAGCTGTGCGGAGTTGCAAGgtTTTAAGTGTTGGCGGTAAGATGAATCTATGGAAAGGCGCCGCCATTTGCCGCGATCTTCACATACCGTACGCCATCATATGCGACCTAGACGCAATCGTACCCAACTCCCGTGAAAACTCCATCCAGTCCCAGTTCGAAAGAGCCGAGGGAGACTGGTACTCCGCAAGTATCCCACACGCGAAAGCGAAACTCGTAGATGAGGAGGAGGCGCCAGCGTCTAAAGCAATCGATGAGACCGAGCATGCGCAGTTGGCGAAACTACGCTCGCTGCGAACTGTGGGGGAAGTGATTCGTTTTTACGAACAGAATCACTATATTTTCGCTTGGTGGCCCATGGGAGGGGAGATAGAGGACGCAGTTAGGCTTACCAAAGCCCAGTTCGGGAAGAAGCTCTGGCCAGATATGCTTTCCGAGGAGATTAAGTCATTTATCTTGTCACTCATTGACCCGCGCAAGCTCCTGATTAAGAACCCGAAGGACAAGGAGGCGAGCAAGGGACCGAATCTAGAAATTTTGAggtgtatttattttattatacgaTTCTTCAAAGAAACTCTAGAAAAGATTTCATAGATATTAATATGAATTATGATGCGATAATGCTattgaatatatatttttgatatTAATCTTTTCGAATAGTACCAACACGTTCCCTGTTTCCAATATGGTTTTGGAAGTTTAGAAAGTTTGTGTACGTTCCGGCCAGGAAACGAGGAAAGGGAACTGCAGAGGAGAGAAGGTACATTCCCTAAGGGGAGGGAAGCCAGCCCGGCGCTCTCGATACACGCCTAGGTCTTAGGCTGCCGATTACCAAACCGTTTTAGAGGGCAAGGCTATCTGTTACACGTTTGTTTACGCATGGAATTTAAAGCCTTCCATTGGTCATACTAGGGTTTAAAGTCAAAATATATACCGAATTCAAATAACGTTGTCAGTACACATGGCAACTCCAAGTCCGAAAGGttcttatgggtactaataaTTCGCAAACTTAAAGGTTAACAATGAACTCCAGCGATGCCAGAGCCACATATCGATGGCCTTTAATggattattgttttattgatCCAGATTATCCTACATTTGGTTGAAATATGATTAGACCCATGATACCCTTCgttcgtagaactgccatttgccaatagACATTTGCCATTTACAAAGGTGTACAAGGAGAAATACCGAGGGATGAATAGAACGGTTCAGGATAGCTTCCATCTCAAATGATAGATGTTTAAATATACCGTGGCACAAGCCAAACCCCTTCGGACGTTTATCGAGCCCACCAAGAACGCTAGGTCATCGAGCATATCTAGGTTCTTGAGTAAGGCCGTTTATTAATTAATCACTGATCATCAATAATTTAGAATATAAAGTGTGTGATAgaaaattattatttctaaaataaatttaacaCAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011498 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13304 all species →	AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050388 all species →	Family	ABC Transporter, Nickel and Peptide Import	Interproscan
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43297 all species →	OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048575736.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.