Gene detail

Detailed information of XP_048576675.1 in Nematostella vectensis

Genomic Location: NC_064046.1:4523822...4534318
NR annotation: XP_048576675.1, DENN domain-containing protein 11-like [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_048720718.1

GTTTTCACTATGCGGGGGAGGGTGCTTTGAATATTTATGCTACCAcgcaaaacaagatggcggacgatgCTCCGCTAGTCGACAGTGAAGAAACCCCGGACTTCTCTTACGATCCAAGGGGTTTAGCACCACGTTATAGCTTTGAGAAGCAACCGCCAAGGCCGAGCTCTCTGCCTGTTGAAAATGGCGGTAATATATTTTCTCCAAGACAAGAAACTCTCCCGGATTTAATAGCGGCAGTTTTCATCGTACATTTCGACACACGGAAAGGCAATATAATAGAGTGGAAATACCCGAAAGATGCTGACCTCAGTGGTGTAGAATTCAAGGCATTGGTCAGTGGATCACATACCATAACACAGGACTTTGTATATTTCAAGACTAAAGACAATCTATATGGTTTGAGCTGTTACGAGAGAATATCAGTGGAAAATGTGGAGGAGCGAGGGTCGCGAATGAAGTCTGTTGGCATTCTGTGTGCAAGATATACATCTCTTCATGAACATATGCCATTTCTGGAAGATGAAGTAACTAAACAATTAGACAACCCTGGCCATTATGGGGATCTAGAGGATTATTTTcacagttttaaaaactgcaTTGTTAGAAACAATTTtgtaccatcaccaccaccagaACATTTGCCTGGTTTAGAAGACGTTCCAATTTTAAAGaTAACTCACCCAGCTGGCTGTTTTCCTCAGTTTATAAATTTCTTTGGAGAAAAAATCTTTGTTCTTTGGAAGCTTGTACTGCTCCAGAAaagaatattatttttctctcCTCCTCCTGTTGGGGTTGCCTGTTATAGAGTTTACTGTGCCTGTTTgctggcaagtcatggcattCCTTTTGGCTTTGAAACTGGTAGCAACCCACTGTTCTTCACAAATGTCTGCGACATGTCTGCTTTGCTTAATGAGCACAAGTACATAGCATGTACTACAGAAAAGATATTTGAGTCTAAAGAGAATGTATGGGACGTGTATGTTGATAACCAGAACATACGATGCAAACGACACCTGGTGTTCACAGCTCACGCCAATCATAAGGATCGGGAGAGGTTTGAGATGCTTGATATATACAGacgAGATCAGTTGATAACTGGAGGAGAGGTCGTCGATGATGAAAAAATGTACACACGGTATTTCGTTCATTTAAACAACACACTTTTCCAAGCGTTATTCGAAGTGGCGTCATCGGAGGACAGAATACTTACGCCTGAGGTGATACGCCGCGTGGGACTGGACCCGAAAGCTGACATTCATTTTTTAGCCGACCTTACTGAACTGTACGGGATCAATGTCCAAATACCGGAACCAACTTGCTGCCCTTTCTACGAACCTCACTAACTGATCAAAATATAAACTCATTGtaccaatattattttttattcataagGTGGAGAGAATTTAGAAGTATCATTATCTAAATATACATGGGTCCCTCGCGTGATCACACTGTTGatcaggggccggttcctgaaaggccgATTACCTTAACCCCCGATCAGCGCCTAATCCCGGGTTAAAATTCGCTAATCGTAGGTCAGCTAACCGACGGATAACTCACCGTTCCCGAAAGCCAAGTAATCCCCCGAATTACTAACCCTGGATTAAACGAgtgaaaaactggtttgaggagtaaaattcacacagggtacccagtaTATCAACAGAAAGCAACTTAAATTTACCTTTGGTGGTTTTATTTTCGCAGAAAAGCCCcaaaacacctctacatcacctgtaattacctccatttcatggccaaaaaagtgtcatttgcaggattcgagttggtgcgtgacactagcgagacagattcatttcaagtacaaatttcatgtaactttctgtctgtctcaGCACAATTTTCAAGTCAGCATCGCAACGAAGGTCACATAATAAAGCGAAATGTTAGGATATTTGATCCCTACATtgttttgtgtaacgtcttttttgtcgacaactttattttataagctttagttctactacaaagtttgggaggcctgtgttaCGCCAACCAAACAGTTggttagcgagttaacccacCTCGCGAGGTTAGATTTTACCTCCAAACTGACCCAGAGTTAGCGCTAACCAGCGTTTCGGGAACGGAACTAATCTgggggtaaaaatttaatcGTGGGTTAGGGTTAATTTAACCCTGGATTAGCGCAaatcggcttttcaggaaccggccccagtaGTCAAggcatgctcgaggatccagcgtactttgcgggcgctcccaaaggtcatTACCCAGTGTTTTGGAACTCAAAATTGTTATAAACTTTTCCAGCGGCTCTTTTGCGGGggtgacctttgggagcgcccgcaaagtacgctggatcctcgagcatgtaTTGTAATAAAGCAAGCAGTGCAATTTAGCAATTGCTAGGAGGgttaaataatttaaattcTTGGCGCAAATAAATGCAATAGATAGCACTAAAGTGCAGAAACCTATATCTAATGAATGGACCcttaggccaagtaaaaatatacaaatgTTTTCCGTTCCCGCCCGCGTCATATTTTTGGGCggcttaaaaaatattatttgttatttctaACTAAAAGATTATAAGCCTCTTATTTCGCCATTTTATCGACTTTGCGTCGTATTCGTCAGTGAATAAAACACTTGCTTCGTGAAGCAAGATGGCTTCTGTTTGCGTTTTGAGACGCATTCAAAATTCCCCTGTCTGAAAGGTCCTTTGGAagacaataataaaaattcaGGAAATAAGATAAAAACCCACCCGCTCgttctttttttctagaaatcCGGACGGGAAACATTTGATTGCGAGGCTTGGTTTTCTAATGATGCAGTACTTAAGAAAGTACGCTTTTTTCTGgggatatttttcttttcctggTAAAATAGACTTCtcctcgcgaacgccagccaaGAGAAATACccagaaaagaggcctctgccaGCAGGGAAGGTCCTAATACAATATGGCATAAGAAGTTGGAACGCAAAGATAGCTCAGCGAAAACAAGGTGCTAGAAAAAATatgggatgggggggggggggggtcgagTTTCCGCACGCTCTACGCCTTGGAACACTTGGATAACAGAAATAGAGAATTAAAATGGTTTCAGAATATTATATTTCAGAATATGTAGATAAACATAATTGTATTACTATCGCCATAGAGAGGTTTAATTTCTATTAATAAAATTCCTTACATTGCTTTAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4FZX0	DENN domain-containing protein 11 OS=Xenopus laevis OX=8355 GN=dennd11 PE=2 SV=1
A4D1U4	DENN domain-containing protein 11 OS=Homo sapiens OX=9606 GN=DENND11 PE=1 SV=1
Q3UHG7	DENN domain-containing protein 11 OS=Mus musculus OX=10090 GN=Dennd11 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007175 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09804 all species →	DENND11	DENN domain-containing protein 11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051731 all species →	Family	DENND11/AVL9 guanine nucleotide exchange factors	Interproscan
IPR018626 all species →	Family	Protein LCHN/Anr2	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31017 all species →	LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048576675.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.