Detailed information of XP_048577039.1 in Nematostella vectensis

Genomic Location: NC_064046.1:3376160...3389823
NR annotation: XP_048577039.1, nibrin isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6XV80Nibrin OS=Xenopus laevis OX=8355 GN=nbn.L PE=1 SV=1
Q9R207Nibrin OS=Mus musculus OX=10090 GN=Nbn PE=1 SV=1
Q5I2W8Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00498FHAFHA domainFamilyInterproscan
PF16508NIBRIN_BRCT_IISecond BRCT domain on Nijmegen syndrome breakage proteinDomainInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF08599Nbs1_CDNA damage repair protein Nbs1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013908DomainNibrin, C-terminalInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR032429DomainNibrin, second BRCT domainInterproscan
IPR040227FamilyNibrin-relatedInterproscan
IPR043014Homologous_superfamilyNibrin, second BRCT domain superfamilyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12162NIBRIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10867NBN, NBS1; nibrin-DNA repair and recombination proteinsko03400deepkoala

TOP