Detailed information of XP_048577151.1 in Nematostella vectensis

Genomic Location: NC_064046.1:1124580...1167117
NR annotation: XP_048577151.1, F-actin-uncapping protein LRRC16A isoform X5 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5VZK9F-actin-uncapping protein LRRC16A OS=Homo sapiens OX=9606 GN=CARMIL1 PE=1 SV=1
Q6EDY6F-actin-uncapping protein LRRC16A OS=Mus musculus OX=10090 GN=Carmil1 PE=1 SV=2
Q5XHY1Capping protein, Arp2/3 and myosin-I linker protein 3 OS=Rattus norvegicus OX=10116 GN=Carmil3 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF16000CARMIL_CCARMIL C-terminusFamilyInterproscan
PF17888Carm_PHCarmil pleckstrin homology domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR031943DomainCARMIL, C-terminal domainInterproscan
IPR041245DomainCARMIL, pleckstrin homology domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR051279FamilyProtein Phosphatase 1 Regulatory and Actin Interaction ProteinInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24112LEUCINE-RICH REPEAT, ISOFORM F-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030027Cellular ComponentlamellipodiumInterproscan
GO:0034315Biological Processregulation of Arp2/3 complex-mediated actin nucleationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20493LRRC16, CARMIL; leucine-rich repeat-containing protein 16-Membrane traffickingko04131deepkoala

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