Gene detail

Detailed information of XP_048577441.1 in Nematostella vectensis

Genomic Location: NC_064047.1:3752883...3801382
NR annotation: XP_048577441.1, 28S ribosomal protein S15, mitochondrial isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P82913	Small ribosomal subunit protein uS15m OS=Bos taurus OX=9913 GN=MRPS15 PE=1 SV=3
P82914	Small ribosomal subunit protein uS15m OS=Homo sapiens OX=9606 GN=MRPS15 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006884 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00312 all species →	Ribosomal_S15	Ribosomal protein S15	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000589 all species →	Family	Small ribosomal subunit protein uS15	Interproscan
IPR009068 all species →	Homologous_superfamily	uS15/NS1, RNA-binding domain superfamily	Interproscan
IPR052137 all species →	Family	Universal small ribosomal subunit uS15	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46685 all species →	28S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02956	RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.