Gene detail

Detailed information of XP_048578058.1 in Nematostella vectensis

Genomic Location: NC_064047.1:11409379...11425383
NR annotation: XP_048578058.1, WSC domain-containing protein 2 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048722101.1

TAACAatatcaatattttcaaatgcaAAACGGACTATTTTCACTTTCTTATAAGTCGACATGAGACTGGCGCGGATAATTTATCTTTTCCTACCGaTGATCTGGACGGTCGTTGTCACTAGCAGTGTACCCCTAGATCTATACTTGGGATGTTACATAGACACCACTGACCGTGATTTGCCGTACAATACTGGATTATATTCAGACCTCACGCCAGTTAAATGCATCGAAATATGTAGAGTTCAAGGGTATATTTTTGCCGCTGCTCAAAATGCAAATAGCTGTTTCTGTGGTAATTCGTACGGAAAACACGGCAAAGCAAGTGACACCGACTGTTCTAAGGCATGTACCGGAAACTCGAACCTTAAGTGCGGAGGTCAGTGGCGAGCAAGTGTCTACAGAGTCGTGACCAAACTATCACAATACATCGGCTGTTATAAGGAAAGTTCGCGCCGTGACCTTTGGGGAGACAAATCGGAGCTCAACGGTACGGTCTCTGCGCAGGATGTTTGCATTCAGAGGTGCAAGGCAAAGGGATTCCACTTTGCTGCTATTAATGACTACACTGTTTGCAACTGTGGAGTCAGCTATGGTCGGTACGGGAAAGCAGTCAGCCCGAAAGACTGCAATCCGAAGTGCAGTGGCGGAGAACATTGCAGCACAACCAacgccaacactatctacagaacagAATCTAAAATTCAACCACTTGCTCGCTATACTACTGTCGTGTACTCAATCCCAGAAGGCAGTGTGCCCCTTCTCAGAGACCACGTGATCTACACTGAGACTTCAGTAAATAACGTCACCATCTGTCTACAGTACTGTGAGCTCTTGCCTGCCTGTGTGTCAATCAATCACAATAGTGTTACCATGGTGTGCGAAATGAAcaacgtgacgtcatcaaccGGGAGAGGGGCGGCAAGAGAGAACTTCATCTACTGGGAACCAATGAAAATAGACCATCTGACGTTGCCGCTTCCATGACTTGCTCAAGTTTTGATGCCCGGTCCACACGACTCCATAATCATTATAGTAAGGTTAAAAAGTTACGCATGCTCAAAAGAATTTGTGTAACTTTTGAAATTTTGGTGTGCCACAAAAGATGGTCTGGACAGCTTTTTAATTCTACTGTGATACAGTCGGATTTAGTTTGGttgtattttttaactttgtttTCGTTCTCGCCCAATTACTAAAGTCGTGCATGCATAGAAAGTCAGTTCGGTAGAAAGtagtatttttaaataaaattaaaatgtcTCTTAGAAATGACTAAGGAATATATCATTTTCCACTTAACAAATAGATATAATTTTCGCCTACTTCTGTCCTATAATAGATGGACGTATGGCGTCGCAGCGTGTAGGAAACAAAAAGTACGCAACGAGACGTAGTCGAGTTGCGTGACTGAtgttcatgacacgctgtgacgtcatccttgcatctattagaggacagaagCACAAGACAATGAGATCtctttgttttatacaacaattaaAATCTAGTTACTATCTAGTGTTATGGGAGCGCGCGCCCATGCTGACGCCGTGCGAGCGTGTGTCCTATAATAGCACATGGactcttgaccaatcagagcttgtgatttacgagtgtcgtTGTATAAAGTAATCTACTGTACGTGCTGCACAGATTGTTTGACCTCTATAATATTCTGGTATGTTATGGTATTCTCGTAGATTATGGTATTCTATTCTGGATTCCGGTAGATTTGTGCGAGAAGTTATATGGTACTATCACGTCTGTCCGTGGGCGCAGTGGAGTGAAACTCTTTTTAATATCACTTAGCTGAAGATAACATATCAGCACAATTACGATTCCTATATTAGGGTTGGTACTAATGAAACATACGCACTAGCTTATAAGTAATAATTGACGCACTTTGCTGTAAAATCTGACTTTGTATTATAGCGGTCAAACTTTGTAATTAAACTTGACGCACATAACAATAAACGCAAATGCCAAAA

Protein

Uniprot

Uniprot term	Description
D4AUF1	WSC domain-containing protein ARB_07867 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_07867 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF01822	WSC	WSC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051836	Family	Kremen receptor	Interproscan
IPR002889	Domain	Carbohydrate-binding WSC	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24269	KREMEN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan