Detailed information of XP_048578646.1 in Nematostella vectensis

Genomic Location: NC_064035.1:3842435...3860548
NR annotation: XP_048578646.1, splicing factor 3B subunit 1 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75533Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3
Q99NB9Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1
O57683Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08920SF3b1Splicing factor 3B subunit 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR034085DomainTOG domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR038737FamilySplicing factor 3B subunit 1-likeInterproscan
IPR015016DomainSplicing factor 3B subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12828SF3B1, SAP155; splicing factor 3B subunit 1-Chromosome and associated proteinsko03036deepkoala

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